Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI74G1025 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 2.7e-87 325.5 189 100.0
TWI77G0273 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 5.6e-48 194.9 192 68.2
Cfa007792 Carpinus fangiana HOM05D008015 ORTHO05D009180 6.0e-26 121.7 167 46.7
QL02p059324 Quercus lobata HOM05D008015 ORTHO05D009180 3.3e-24 115.9 170 42.4
TAR371G1005 Trochodendron aralioides HOM05D008015 ORTHO05D009180 1.1e-22 110.9 163 44.2
Potri.004G085100 Populus trichocarpa HOM05D008015 ORTHO05D009180 2.4e-22 109.8 181 42.0
TAR629G2519 Trochodendron aralioides HOM05D008015 ORTHO05D009180 4.9e-20 102.1 164 42.1
Ciclev10012847m.g Citrus clementina HOM05D008015 ORTHO05D009180 6.4e-20 101.7 158 43.0
Nn4g24386 Nelumbo nucifera HOM05D008015 ORTHO05D009180 9.3e-19 97.8 161 39.8
Lalb_Chr18g0053531 Lupinus albus HOM05D008015 ORTHO05D009180 1.6e-18 97.1 164 40.2
Duzib268G1603 Durio zibethinus HOM05D008015 ORTHO05D009180 3.5e-18 95.9 157 45.9
Potri.017G131300 Populus trichocarpa HOM05D008015 ORTHO05D009180 3.5e-18 95.9 179 39.7
Phvul.008G237600 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 2.8e-15 86.3 126 40.5
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 3.7e-15 85.9 137 41.6
CSS0009801 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 6.2e-15 85.1 156 41.0
Manes.02G078100 Manihot esculenta HOM05D008015 ORTHO05D009180 8.2e-15 84.7 168 40.5
CiPaw.03G073500 Carya illinoinensis HOM05D008015 ORTHO05D009180 1.8e-14 83.6 173 38.2
Cc07_g13270 Coffea canephora HOM05D008015 ORTHO05D009180 1.8e-14 83.6 156 39.7
CSS0018355 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 2.4e-14 83.2 156 40.4
Glyma.14G213100 Glycine max HOM05D008015 ORTHO05D009180 4.0e-14 82.4 139 38.8
Lalb_Chr15g0084981 Lupinus albus HOM05D008015 ORTHO05D009180 4.0e-14 82.4 137 40.1
VMungo0647G1978 Vigna mungo HOM05D008015 ORTHO05D009180 5.3e-14 82.0 131 41.2
LjContig00141g0001505 Lotus japonicus HOM05D008015 ORTHO05D009180 1.2e-13 80.9 147 37.4
Oeu032314.1 Olea europaea HOM05D008015 ORTHO05D009180 2.6e-13 79.7 142 36.6
Sed0025761 Sechium edule HOM05D008015 ORTHO05D009180 2.6e-13 79.7 131 42.0
Sabra17G0109400 Salix brachista HOM05D008015 ORTHO05D009180 1.7e-12 77.0 179 35.8
Cpa.g.sc340.4 Carica papaya HOM05D008015 ORTHO05D009180 4.9e-12 75.5 157 37.6
SalBow5G5173 Salvia bowleyana HOM05D008015 ORTHO05D009180 8.4e-12 74.7 123 38.2
Glyma.18G041300 Glycine max HOM05D008015 ORTHO05D009180 1.1e-11 74.3 156 37.8
ClCG03G008850 Citrullus lanatus HOM05D008015 ORTHO05D009180 1.4e-11 73.9 131 42.7
Medtr5g077940 Medicago truncatula HOM05D008015 ORTHO05D009180 5.5e-11 72.0 150 39.3
Nn3g18370 Nelumbo nucifera HOM05D008015 ORTHO05D009180 5.5e-11 72.0 102 46.1
MBI13_g45895_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 7.1e-11 71.6 154 35.7
Thecc.04G053900 Theobroma cacao HOM05D008015 ORTHO05D009180 7.1e-11 71.6 171 35.1
MELO3C022825.2 Cucumis melo HOM05D008015 ORTHO05D009180 2.1e-10 70.1 151 39.1
MBI19_g08383_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 3.5e-10 69.3 131 37.4
CANSAT35G1526 Cannabis sativa HOM05D008015 ORTHO05D009180 7.9e-10 68.2 161 35.4
SGA_v2.0_scaffold45G17152 Striga asiatica HOM05D008015 ORTHO05D009180 1.3e-09 67.4 145 39.3
MSTRG.3702 Avicennia marina HOM05D008015 ORTHO05D009180 1.8e-09 67.0 145 35.2
CsaV3_5G023910 Cucumis sativus L. HOM05D009275 ORTHO05D009180 1.8e-09 67.0 151 39.1
Prupe.3G166400 Prunus persica HOM05D008015 ORTHO05D009180 1.8e-09 67.0 196 30.6
TPR.G30001 Trifolium pratense HOM05D008015 ORTHO05D009180 1.8e-09 67.0 148 38.5
Eucgr.F02874 Eucalyptus grandis HOM05D008015 ORTHO05D009180 3.0e-09 66.2 169 29.0
Actinidia17202 Actinidia chinensis HOM05D008015 ORTHO05D009180 5.1e-09 65.5 131 36.6
DCAR_014163 Daucus carota HOM05D008015 ORTHO05D009180 8.7e-09 64.7 140 37.9
Lalb_Chr17g0346041 Lupinus albus HOM05D008015 ORTHO05D009180 8.7e-09 64.7 126 40.5
RcHm_v2.0_Chr3g0491241 Rosa chinensis HOM05D008015 ORTHO05D009180 8.7e-09 64.7 216 28.7
ATR0753G067 Amborella trichopoda HOM05D008015 ORTHO05D009180 1.5e-08 63.9 139 35.3
MBI13_g14024_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.5e-08 63.9 156 34.0
Actinidia35723 Actinidia chinensis HOM05D008015 ORTHO05D009180 1.9e-08 63.5 154 31.2
Actinidia28799 Actinidia chinensis HOM05D008015 ORTHO05D009180 5.7e-08 62.0 118 33.1
Rhsim10G0178500 Rhododendron simsii HOM05D008015 ORTHO05D009180 5.7e-08 62.0 187 33.2
FAN26G1918 Fragaria x ananassa HOM05D008015 ORTHO05D009180 1.3e-07 60.8 195 28.7
Lj2P519T18 Lonicera japonica HOM05D008015 ORTHO05D009180 1.6e-07 60.5 126 38.1
Gorai.001G082600 Gossypium raimondii HOM05D008015 ORTHO05D009180 4.8e-07 58.9 138 39.1
FAN19G3187 Fragaria x ananassa HOM05D008015 ORTHO05D009180 6.3e-07 58.5 195 28.2
PSO478G3758 Papaver somniferum HOM05D008015 ORTHO05D009180 6.3e-07 58.5 167 32.9
FAN23G1273 Fragaria x ananassa HOM05D008015 ORTHO05D009180 8.2e-07 58.2 195 28.2
Gohir.D07G078200 Gossypium hirsutum HOM05D008015 ORTHO05D009180 1.1e-06 57.8 138 39.1
MD09G1270500 Malus domestica HOM05D008015 ORTHO05D009180 1.1e-06 57.8 186 32.3
Phvul.001G229400 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 2.4e-06 56.6 103 37.9
Psat2g045760 Pisum sativum HOM05D008015 ORTHO05D009180 2.4e-06 56.6 154 32.5
Gohir.A07G073500 Gossypium hirsutum HOM05D008015 ORTHO05D009180 3.1e-06 56.2 135 37.0
FvH4_1g30203 Fragaria vesca HOM05D008015 ORTHO05D009180 5.3e-06 55.5 119 33.6


User provided reference genes

Program Settings