Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 8.1e-146 520.4 264 100.0
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 5.1e-108 394.8 266 82.0
TWI53G0070 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 2.1e-93 346.3 257 75.9
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 1.9e-38 163.7 264 45.5
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 3.6e-37 159.5 240 51.7
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.8e-36 157.1 204 50.5
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 2.0e-35 153.7 270 43.0
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 3.4e-35 152.9 285 41.4
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 2.9e-34 149.8 289 41.5
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 6.4e-34 148.7 243 44.4
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 3.2e-33 146.4 286 41.6
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 3.9e-31 139.4 232 45.7
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 2.1e-29 133.7 250 44.0
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 2.1e-29 133.7 250 42.0
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 8.1e-29 131.7 270 38.5
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 1.8e-28 130.6 243 42.0
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 2.4e-28 130.2 229 43.7
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 3.8e-26 122.9 218 45.4
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 6.4e-26 122.1 218 42.7
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 1.4e-25 120.9 203 43.8
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 2.4e-25 120.2 262 39.3
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 5.5e-25 119.0 291 37.5
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 1.2e-24 117.9 165 47.9
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 2.1e-24 117.1 264 37.1
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.3e-23 114.4 203 43.3
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 3.0e-23 113.2 274 38.7
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 8.7e-23 111.7 292 37.3
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 1.1e-22 111.3 270 38.9
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 1.6e-21 107.5 207 40.1
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 8.1e-21 105.1 223 39.9
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 8.1e-21 105.1 236 41.1
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 8.1e-21 105.1 237 38.4
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 8.1e-21 105.1 215 40.5
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.1e-20 104.8 215 40.5
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 3.1e-20 103.2 238 39.5
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 4.0e-20 102.8 236 40.7
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 5.3e-20 102.4 237 38.8
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 5.3e-20 102.4 256 37.5
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 6.9e-20 102.1 256 37.5
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 9.0e-20 101.7 230 40.9
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 2.0e-19 100.5 248 38.3
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 2.6e-19 100.1 232 38.8
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 2.6e-19 100.1 228 39.5
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 3.4e-19 99.8 304 33.2
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 4.5e-19 99.4 220 38.2
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 7.6e-19 98.6 145 44.8
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 7.6e-19 98.6 248 36.3
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 1.3e-18 97.8 276 35.1
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 1.7e-18 97.4 191 38.2
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 3.8e-18 96.3 255 38.0
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 4.9e-18 95.9 160 45.0
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 6.5e-18 95.5 206 39.8
COL.COLO4_14855 Corchorus olitorius HOM05D004206 ORTHO05D003325 8.4e-18 95.1 161 46.6
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 8.4e-18 95.1 275 33.5
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.2e-17 93.2 249 36.9
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 3.2e-17 93.2 260 35.4
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 4.2e-17 92.8 263 36.1
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 5.5e-17 92.4 135 46.7
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 7.1e-17 92.0 289 33.2
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 7.1e-17 92.0 208 38.5
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 9.3e-17 91.7 296 34.5
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 9.3e-17 91.7 270 34.1
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.2e-16 91.3 244 36.1
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.2e-16 91.3 155 43.2
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 1.2e-16 91.3 204 40.2
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 2.1e-16 90.5 289 32.9
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 2.1e-16 90.5 245 36.7
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 2.7e-16 90.1 243 34.6
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 4.6e-16 89.4 229 37.1
THA.LOC104805432 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 4.6e-16 89.4 197 42.6
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 6.0e-16 89.0 254 36.2
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 6.0e-16 89.0 143 46.2
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 7.9e-16 88.6 247 35.6
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 7.9e-16 88.6 279 33.7
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 1.0e-15 88.2 265 34.0
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.0e-15 88.2 256 34.8
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 1.8e-15 87.4 270 31.5
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 2.3e-15 87.0 283 32.5
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 3.0e-15 86.7 263 32.3
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 3.9e-15 86.3 268 30.6
Eucgr.A01242 Eucalyptus grandis HOM05D004206 ORTHO05D003325 1.1e-14 84.7 184 39.1
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 4.3e-14 82.8 298 33.6
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 7.4e-14 82.0 245 38.0
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 7.4e-14 82.0 257 35.4
Aa31LG10G9300 Aethionema arabicum HOM05D008508 ORTHO05D003325 9.6e-14 81.6 153 42.5
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 1.3e-13 81.3 262 33.2
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 1.3e-13 81.3 254 34.3
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 1.3e-13 81.3 223 37.2
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 1.6e-13 80.9 264 34.1
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.6e-13 80.9 179 37.4
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 1.6e-13 80.9 232 34.9
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 2.1e-13 80.5 227 33.5
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 3.7e-13 79.7 227 33.5
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 4.8e-13 79.3 252 34.5
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 8.2e-13 78.6 196 37.2
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 8.2e-13 78.6 161 38.5
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 8.2e-13 78.6 138 44.2
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 1.1e-12 78.2 240 33.8
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 1.4e-12 77.8 91 47.3
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 1.4e-12 77.8 265 32.5
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 1.4e-12 77.8 255 32.9
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 1.8e-12 77.4 195 36.9
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 1.8e-12 77.4 265 35.1
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 1.8e-12 77.4 221 35.3
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 3.1e-12 76.6 258 32.9
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 5.3e-12 75.9 155 38.1
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 5.3e-12 75.9 117 45.3
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 6.9e-12 75.5 94 48.9
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 6.9e-12 75.5 190 38.4
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 6.9e-12 75.5 237 34.2
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 9.0e-12 75.1 197 37.1
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 2.0e-11 73.9 211 36.0
AT2G37480 Arabidopsis thaliana HOM05D008508 ORTHO05D003325 3.4e-11 73.2 101 45.5
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 4.5e-11 72.8 290 32.4
ClCG10G020930 Citrullus lanatus HOM05D004206 ORTHO05D003325 7.6e-11 72.0 243 30.9
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 1.0e-10 71.6 301 34.6
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 1.0e-10 71.6 277 31.8
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 1.3e-10 71.2 244 31.6
Rhsim13G0085900 Rhododendron simsii HOM05D004206 ORTHO05D003325 2.9e-10 70.1 125 40.0
CsaV3_3G035080 Cucumis sativus L. HOM05D004206 ORTHO05D003325 3.8e-10 69.7 242 30.2
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 3.8e-10 69.7 259 32.4
MELO3C009278.2 Cucumis melo HOM05D004206 ORTHO05D003325 8.5e-10 68.6 253 30.4
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 1.1e-09 68.2 165 38.2
AL4G33980 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 1.1e-09 68.2 122 42.6
BcaB01g03773 Brassica carinata HOM05D008508 ORTHO05D003325 1.1e-09 68.2 172 34.9
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 1.4e-09 67.8 113 44.2
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 2.5e-09 67.0 203 33.5
PSO339G1969 Papaver somniferum HOM05D004206 ORTHO05D003325 3.2e-09 66.6 91 42.9
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 4.2e-09 66.2 192 36.5
AT3G53670 Arabidopsis thaliana HOM05D008508 ORTHO05D003325 7.2e-09 65.5 134 38.1
PSO648G0001 Papaver somniferum HOM05D004206 ORTHO05D003325 9.3e-09 65.1 91 45.1
Sed0018769 Sechium edule HOM05D004206 ORTHO05D003325 9.3e-09 65.1 182 34.6
Thhalv10010719m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 1.6e-08 64.3 153 38.6
CSS0031426 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D000289 2.7e-08 63.5 146 36.3
CDE09G0187 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 2.7e-08 63.5 177 34.5
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 3.6e-08 63.2 72 48.6
Carub.0005s2025 Capsella rubella HOM05D008508 ORTHO05D003325 3.6e-08 63.2 175 35.4
vmacro08670 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 3.6e-08 63.2 238 29.8
AL5G34640 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 4.6e-08 62.8 166 35.5
Os05g0113500 Oryza sativa ssp. japonica HOM05D004206 ORTHO05D003325 4.6e-08 62.8 153 33.3
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 6.1e-08 62.4 93 43.0
Hma1.2p1_1535F.1_g289470 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 6.1e-08 62.4 126 38.9
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 7.9e-08 62.0 75 54.7
Psat3g048840 Pisum sativum HOM05D004206 ORTHO05D003325 1.3e-07 61.2 126 39.7
Thhalv10017918m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 1.8e-07 60.8 73 53.4
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 1.8e-07 60.8 274 29.6
CDE02G3836 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 3.9e-07 59.7 192 33.9
TAR636G0761 Trochodendron aralioides HOM05D004206 ORTHO05D003325 3.9e-07 59.7 143 35.0
SEGI_05191 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 5.1e-07 59.3 157 33.8
C08p28980 Brassica napus HOM05D008508 ORTHO05D003325 6.7e-07 58.9 173 31.8
BolC6t37349H Brassica oleracea HOM05D008508 ORTHO05D003325 6.7e-07 58.9 95 42.1
BcaB02g07768 Brassica carinata HOM05D008508 ORTHO05D003325 8.7e-07 58.5 125 34.4
BcaB02g09283 Brassica carinata HOM05D008508 ORTHO05D003325 8.7e-07 58.5 137 34.3
PGR004G2702 Punica granatum HOM05D004206 ORTHO05D003325 8.7e-07 58.5 310 29.0
Sp4g19810 Schrenkiella parvula HOM05D008508 ORTHO05D003325 8.7e-07 58.5 126 34.9
vmacro03102 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 8.7e-07 58.5 90 42.2
BcaC01g05613 Brassica carinata HOM05D008508 ORTHO05D003325 1.1e-06 58.2 153 34.6
C03p24300 Brassica napus HOM05D008508 ORTHO05D003325 1.1e-06 58.2 153 34.6
BolC3t14826H Brassica oleracea HOM05D008508 ORTHO05D003325 1.1e-06 58.2 153 34.6
BcaB06g28998 Brassica carinata HOM05D008508 ORTHO05D003325 1.9e-06 57.4 100 40.0
BolC4t22647H Brassica oleracea HOM05D008508 ORTHO05D003325 1.9e-06 57.4 126 38.1
Lsat_1_v5_gn_1_55700 Lactuca sativa HOM05D004206 ORTHO05D003325 1.9e-06 57.4 86 45.3
BcaC07g39726 Brassica carinata HOM05D008508 ORTHO05D003325 2.5e-06 57.0 172 31.4
A05p08470 Brassica napus HOM05D008508 ORTHO05D003325 2.5e-06 57.0 137 35.8
Migut.M01027 Erythranthe guttata HOM05D004206 ORTHO05D003325 2.5e-06 57.0 81 45.7
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 2.5e-06 57.0 255 29.8
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 2.5e-06 57.0 171 35.1
THA.LOC104824529 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 2.5e-06 57.0 94 39.4
BraA05t19816Z Brassica rapa HOM05D008508 ORTHO05D003325 3.3e-06 56.6 138 36.2
Psat2g133080 Pisum sativum HOM05D000159 ORTHO05D000148 4.3e-06 56.2 122 36.9
BolC8t50501H Brassica oleracea HOM05D008508 ORTHO05D003325 5.7e-06 55.8 143 35.0
Sp5g08700 Schrenkiella parvula HOM05D008508 ORTHO05D003325 5.7e-06 55.8 158 35.4
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 5.7e-06 55.8 80 50.0
THA.LOC104806576 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 5.7e-06 55.8 230 31.3
Carub.0004s1941 Capsella rubella HOM05D008508 ORTHO05D003325 7.4e-06 55.5 148 33.8
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 7.4e-06 55.5 161 32.3
Nn2g10438 Nelumbo nucifera HOM05D004206 ORTHO05D003325 7.4e-06 55.5 62 50.0
SEGI_11879 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 7.4e-06 55.5 162 34.0
BcaC08g44645 Brassica carinata HOM05D008508 ORTHO05D003325 9.7e-06 55.1 68 48.5
A07p21780 Brassica napus HOM05D008508 ORTHO05D003325 9.7e-06 55.1 134 35.1
C06p21610 Brassica napus HOM05D008508 ORTHO05D003325 9.7e-06 55.1 68 48.5
HanXRQChr11g0349321 Helianthus annuus HOM05D004206 ORTHO05D003325 9.7e-06 55.1 88 37.5
HPP92_000797 Vanilla planifolia HOM05D004206 ORTHO05D003325 9.7e-06 55.1 103 39.8


User provided reference genes

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