Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.1e-309 1065.8 553 100.0
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.9e-185 652.5 536 69.2
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 3.8e-105 386.3 614 45.8
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 7.3e-96 355.5 525 48.2
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 4.9e-92 342.8 539 47.1
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.0e-89 335.1 575 45.6
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 2.8e-87 327.0 455 49.9
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 3.1e-86 323.6 469 47.8
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 5.2e-86 322.8 516 45.3
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 4.4e-85 319.7 492 45.5
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 7.8e-82 308.9 455 48.1
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 3.3e-80 303.5 507 45.2
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 3.1e-78 297.0 563 42.3
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 4.0e-78 296.6 442 48.9
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.5e-77 294.7 461 48.2
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 4.9e-76 289.7 461 47.3
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 1.6e-74 284.6 544 39.3
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 5.1e-73 279.6 435 45.7
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 3.6e-71 273.5 462 44.4
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.9e-70 268.9 446 46.9
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 4.9e-68 263.1 463 46.2
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.1e-67 261.9 465 44.7
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 1.9e-67 261.2 508 41.9
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 5.4e-67 259.6 482 45.2
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 1.2e-66 258.5 501 40.7
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 1.0e-65 255.4 528 40.9
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 2.3e-65 254.2 530 40.6
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 3.0e-65 253.8 445 45.4
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 3.9e-65 253.4 462 43.7
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.2e-63 248.4 467 44.1
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 2.8e-63 247.3 465 41.9
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 8.1e-63 245.7 470 41.5
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 6.8e-62 242.7 421 45.4
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 1.5e-61 241.5 503 40.6
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 2.2e-60 237.7 457 45.7
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 6.4e-60 236.1 445 41.3
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 3.0e-57 227.3 451 43.5
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 3.3e-56 223.8 436 41.5
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.6e-55 220.3 461 42.5
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 8.1e-55 219.2 464 41.6
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 5.3e-54 216.5 442 41.0
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 6.9e-54 216.1 477 38.6
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 9.0e-54 215.7 478 40.0
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 4.4e-53 213.4 445 40.7
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 4.4e-53 213.4 500 37.2
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 7.6e-53 212.6 465 41.3
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 4.9e-52 209.9 443 40.6
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 4.9e-52 209.9 443 40.6
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 5.4e-51 206.5 461 41.6
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 9.3e-51 205.7 384 42.2
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 1.2e-50 205.3 429 42.2
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 3.5e-50 203.8 458 40.8
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 3.5e-50 203.8 421 41.1
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 1.0e-49 202.2 443 40.2
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.3e-49 201.8 474 40.7
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.9e-49 200.3 444 39.4
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 1.1e-48 198.7 468 40.4
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 7.4e-48 196.1 438 40.6
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 6.2e-47 193.0 494 37.2
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 8.1e-47 192.6 448 40.4
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 2.0e-45 188.0 451 41.0
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 3.4e-45 187.2 419 38.7
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 3.4e-45 187.2 488 34.4
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 1.3e-44 185.3 419 38.4
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 9.3e-43 179.1 489 36.2
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 2.1e-42 177.9 432 37.3
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 6.0e-42 176.4 457 37.0
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 3.0e-41 174.1 444 37.4
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 6.7e-41 172.9 433 37.9
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 1.9e-40 171.4 439 38.5
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 1.9e-40 171.4 400 42.0
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 5.6e-40 169.9 234 49.6
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 9.6e-40 169.1 462 37.9
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 2.1e-39 167.9 462 35.9
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 2.8e-39 167.5 409 37.7
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 6.2e-39 166.4 442 38.2
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 1.1e-38 165.6 429 40.1
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 9.0e-38 162.5 431 38.3
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 2.6e-37 161.0 415 36.9
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 5.5e-35 153.3 413 38.7
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 1.8e-33 148.3 435 36.3
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 3.1e-30 137.5 435 34.9
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 9.0e-30 136.0 433 36.3
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 2.0e-29 134.8 366 38.8
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 1.3e-28 132.1 458 33.8
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 2.2e-28 131.3 425 33.2
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 1.1e-27 129.0 427 34.0
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 2.5e-27 127.9 432 34.3
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 5.5e-27 126.7 567 31.4
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 1.2e-26 125.6 487 32.9
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 1.2e-26 125.6 487 32.9
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 7.9e-26 122.9 426 32.2
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 1.8e-25 121.7 446 33.2
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 3.0e-25 120.9 426 33.8
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 1.1e-24 119.0 463 33.3
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 5.7e-24 116.7 426 36.2
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.2e-23 114.8 345 34.5
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.4e-22 112.1 341 34.6
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 1.5e-21 108.6 310 36.1
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 1.5e-21 108.6 406 33.3
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 1.5e-21 108.6 73 71.2
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 5.9e-21 106.7 314 36.6
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 1.3e-20 105.5 252 37.7
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 1.7e-20 105.1 118 54.2
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 8.5e-20 102.8 160 45.0
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 1.2e-18 99.0 133 48.1
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 1.8e-17 95.1 417 29.5
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 2.3e-17 94.7 426 30.5
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 2.2e-15 88.2 541 28.8
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.1e-14 85.9 156 39.1
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 4.1e-14 84.0 425 28.9
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 3.8e-12 77.4 94 47.9
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.5e-12 76.3 63 60.3
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 1.3e-07 62.4 287 29.3
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 1.3e-07 62.4 112 42.9
CSS0001940 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.4e-06 58.9 42 69.0
AT3G56720 Arabidopsis thaliana HOM05D006326 ORTHO05D007589 1.8e-06 58.5 277 31.8
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 2.4e-06 58.2 62 48.4
CDE02G3045 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 4.1e-06 57.4 71 45.1
Dinv25932 Davidia involucrata HOM05D000657 ORTHO05D002092 5.3e-06 57.0 45 66.7


User provided reference genes

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