Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 5.8e-141 504.2 254 100.0
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 4.0e-73 278.9 255 57.3
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 3.5e-69 265.8 255 55.3
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 7.7e-69 264.6 242 57.9
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 1.5e-64 250.4 252 50.8
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 7.5e-64 248.1 242 55.8
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.4e-62 243.8 238 54.2
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 2.4e-62 243.0 231 55.4
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 1.3e-60 237.3 265 52.5
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 2.9e-60 236.1 255 50.6
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 6.6e-60 235.0 259 48.6
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.5e-56 223.8 257 50.2
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 2.9e-55 219.5 236 52.1
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 2.9e-55 219.5 259 49.0
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 4.9e-55 218.8 263 46.8
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 1.8e-54 216.9 265 46.0
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 2.0e-53 213.4 267 47.9
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 4.6e-53 212.2 258 47.3
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 1.7e-52 210.3 265 47.5
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 2.3e-52 209.9 238 49.6
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 6.6e-52 208.4 264 46.2
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 8.6e-52 208.0 264 45.8
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 8.6e-52 208.0 258 47.3
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 1.9e-51 206.8 260 46.5
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 4.3e-51 205.7 261 45.6
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 7.3e-51 204.9 257 47.5
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 2.8e-50 203.0 266 46.6
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 1.4e-49 200.7 264 46.2
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 2.3e-49 199.9 258 47.3
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 6.8e-49 198.4 259 45.6
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 2.6e-48 196.4 260 43.8
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.4e-48 195.7 246 45.5
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 7.5e-48 194.9 240 47.5
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 2.2e-47 193.4 253 46.2
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 2.9e-47 193.0 266 45.5
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 8.3e-47 191.4 246 44.3
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 1.1e-46 191.0 249 45.0
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 1.4e-46 190.7 230 47.0
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 1.4e-46 190.7 260 46.9
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 4.1e-46 189.1 256 44.1
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 9.2e-46 188.0 256 45.7
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 1.6e-45 187.2 260 45.4
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 2.0e-45 186.8 264 43.6
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.7e-45 186.4 246 44.7
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.0e-44 184.5 263 42.2
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.3e-44 184.1 246 44.3
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 1.7e-44 183.7 246 44.3
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 6.6e-44 181.8 229 46.3
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 4.3e-43 179.1 203 49.8
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 5.6e-43 178.7 264 42.0
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 4.7e-42 175.6 257 42.4
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 4.7e-42 175.6 253 43.9
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.8e-41 173.7 281 39.9
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 1.5e-40 170.6 256 41.8
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 3.4e-40 169.5 248 43.5
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 7.5e-40 168.3 266 41.0
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 7.5e-40 168.3 267 40.1
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 4.9e-39 165.6 267 39.7
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 2.4e-38 163.3 280 38.9
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 5.4e-38 162.2 258 39.1
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 2.7e-37 159.8 225 41.3
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 1.3e-36 157.5 249 39.4
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 1.3e-36 157.5 259 38.6
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 6.6e-36 155.2 227 41.4
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 1.5e-35 154.1 232 39.7
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.9e-35 153.7 263 39.5
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 2.5e-35 153.3 247 38.9
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 2.5e-35 153.3 226 41.2
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.2e-34 151.0 247 38.5
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 3.6e-34 149.4 219 43.8
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 1.1e-33 147.9 255 39.2
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 6.8e-33 145.2 233 39.9
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 6.8e-33 145.2 273 38.8
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 5.8e-32 142.1 246 38.2
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 2.2e-31 140.2 205 41.5
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 6.4e-31 138.7 244 38.9
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 5.4e-30 135.6 257 36.6
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 5.4e-30 135.6 224 39.3
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 7.8e-29 131.7 318 33.3
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 5.6e-27 125.6 246 36.2
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 4.7e-26 122.5 91 64.8
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 4.0e-25 119.4 82 67.1
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 9.9e-24 114.8 107 55.1
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 1.1e-22 111.3 122 45.1
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 1.1e-22 111.3 122 46.7
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 2.4e-22 110.2 97 52.6
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 2.4e-22 110.2 114 47.4
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 4.2e-22 109.4 114 48.2
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 7.1e-22 108.6 97 51.5
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 7.1e-22 108.6 97 51.5
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 7.1e-22 108.6 97 51.5
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 7.1e-22 108.6 97 51.5
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 7.1e-22 108.6 97 51.5
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 1.6e-21 107.5 83 57.8
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 4.6e-21 105.9 235 32.3
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 3.0e-20 103.2 234 32.9
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 6.6e-20 102.1 140 40.7
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 2.0e-16 90.5 80 52.5
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 2.6e-16 90.1 81 51.9
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 5.1e-12 75.9 151 30.5
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 2.1e-10 70.5 107 46.7
FAN14G2589 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.0e-08 63.9 168 34.5
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 1.3e-07 61.2 76 42.1
Ah.03g135680 Amaranthus hybridus HOM05D002304 ORTHO05D002363 1.1e-06 58.2 69 42.0
AUR62028858 Chenopodium quinoa HOM05D002304 ORTHO05D002363 1.1e-06 58.2 70 45.7
Hund25504 Selenicereus undatus HOM05D002304 ORTHO05D002363 1.1e-06 58.2 67 44.8
HPP92_011745 Vanilla planifolia HOM05D002304 ORTHO05D002363 1.1e-06 58.2 60 48.3
Gohir.A03G055000 Gossypium hirsutum HOM05D002304 ORTHO05D002363 1.4e-06 57.8 136 31.6
AUR62005698 Chenopodium quinoa HOM05D002304 ORTHO05D002363 1.9e-06 57.4 70 44.3
Gohir.D03G111900 Gossypium hirsutum HOM05D002304 ORTHO05D002363 1.9e-06 57.4 136 31.6
Gorai.003G118200 Gossypium raimondii HOM05D002304 ORTHO05D002363 1.9e-06 57.4 136 31.6
Oeu055476.1 Olea europaea HOM05D002304 ORTHO05D002363 1.9e-06 57.4 84 39.3
Phvul.008G018900 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 1.9e-06 57.4 70 42.9
Eucgr.G01957 Eucalyptus grandis HOM05D002304 ORTHO05D002363 2.4e-06 57.0 90 37.8
Sabra01G0045200 Salix brachista HOM05D002304 ORTHO05D002363 3.2e-06 56.6 80 37.5
SEGI_28141 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.2e-06 56.6 62 41.9
Aqoxy5G03199 Aquilegia oxysepala HOM05D002304 ORTHO05D002363 4.2e-06 56.2 74 41.9
CBR_g31169 Chara braunii HOM05D002304 ORTHO05D002363 4.2e-06 56.2 70 40.0
Ciclev10032137m.g Citrus clementina HOM05D002304 ORTHO05D002363 4.2e-06 56.2 64 43.8
Nitab4.5_0000060g0010 Nicotiana tabacum HOM05D002304 ORTHO05D002363 4.2e-06 56.2 58 46.6
Nitab4.5_0001408g0050 Nicotiana tabacum HOM05D002304 ORTHO05D002363 4.2e-06 56.2 58 46.6
Peaxi162Scf00128g01713 Petunia axillaris HOM05D002304 ORTHO05D002363 4.2e-06 56.2 124 33.9
HPP92_013601 Vanilla planifolia HOM05D002304 ORTHO05D002363 4.2e-06 56.2 60 46.7
VMungo1383G0264 Vigna mungo HOM05D002304 ORTHO05D002363 4.2e-06 56.2 80 40.0
Duzib205G0973 Durio zibethinus HOM05D002304 ORTHO05D002363 5.5e-06 55.8 61 44.3
Migut.K01040 Erythranthe guttata HOM05D002304 ORTHO05D002363 5.5e-06 55.8 57 47.4
Oeu003274.1 Olea europaea HOM05D002304 ORTHO05D002363 5.5e-06 55.8 84 38.1
QL03p049930 Quercus lobata HOM05D002304 ORTHO05D002363 5.5e-06 55.8 62 43.5
MSTRG.464 Avicennia marina HOM05D002304 ORTHO05D002363 7.1e-06 55.5 62 46.8
CANSAT01G2027 Cannabis sativa HOM05D002304 ORTHO05D002363 7.1e-06 55.5 88 37.5
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 7.1e-06 55.5 54 50.0
Hma1.2p1_0459F.1_g157130 Hydrangea macrophylla HOM05D002304 ORTHO05D002363 7.1e-06 55.5 61 44.3
Oeu058898.1 Olea europaea HOM05D002304 ORTHO05D002363 7.1e-06 55.5 56 48.2
SGA_v2.0_scaffold87G27185 Striga asiatica HOM05D002304 ORTHO05D002363 7.1e-06 55.5 71 39.4
HPP92_021624 Vanilla planifolia HOM05D002304 ORTHO05D002363 7.1e-06 55.5 54 50.0
Actinidia34006 Actinidia chinensis HOM05D002304 ORTHO05D002363 9.3e-06 55.1 61 44.3
BraA01t02431Z Brassica rapa HOM05D002304 ORTHO05D002363 9.3e-06 55.1 85 37.6
Manes.09G186400 Manihot esculenta HOM05D002304 ORTHO05D002363 9.3e-06 55.1 62 45.2
Phvul.008G018600 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 9.3e-06 55.1 60 41.7
Potri.015G104000 Populus trichocarpa HOM05D002304 ORTHO05D002363 9.3e-06 55.1 61 44.3
Sabra12G0077100 Salix brachista HOM05D002304 ORTHO05D002363 9.3e-06 55.1 61 45.9
Sc11g0000170 Simmondsia chinensis HOM05D002304 ORTHO05D002363 9.3e-06 55.1 64 45.3
Sc22g0003530 Simmondsia chinensis HOM05D002304 ORTHO05D002363 9.3e-06 55.1 68 41.2
Solyc05g023820.3 Solanum lycopersicum HOM05D002304 ORTHO05D002363 9.3e-06 55.1 61 47.5
Sopen05g018410 Solanum pennellii HOM05D002304 ORTHO05D002363 9.3e-06 55.1 61 47.5
PGSC0003DMG400006479 Solanum tuberosum HOM05D002304 ORTHO05D002363 9.3e-06 55.1 61 47.5
TWI75G1229 Tripterygium wilfordii HOM05D002304 ORTHO05D002363 9.3e-06 55.1 62 45.2
vmacro16079 Vaccinium macrocarpon HOM05D002304 ORTHO05D002363 9.3e-06 55.1 54 50.0


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