Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 7.7e-255 883.2 426 100.0
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 3.3e-189 665.2 401 76.8
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 1.2e-186 656.8 400 76.5
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 2.1e-183 646.0 406 73.9
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 2.1e-183 646.0 406 73.6
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.8e-182 642.9 398 74.6
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 1.3e-180 636.7 408 72.8
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 4.8e-180 634.8 406 72.4
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 2.0e-178 629.4 397 73.8
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 2.2e-177 625.9 398 73.1
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 1.1e-176 623.6 429 69.7
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.2e-176 621.7 407 72.7
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 7.1e-176 620.9 396 72.2
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.6e-175 619.8 403 72.5
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 4.6e-175 618.2 410 70.5
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.0e-174 615.5 419 69.2
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 5.6e-173 611.3 418 67.9
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 4.8e-172 608.2 403 70.2
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 8.2e-172 607.4 410 68.5
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 1.4e-171 606.7 409 67.2
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 2.4e-171 605.9 397 70.0
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 4.0e-171 605.1 398 70.9
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 6.9e-171 604.4 410 68.0
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 1.2e-170 603.6 399 70.2
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 2.0e-170 602.8 429 66.9
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 2.6e-170 602.4 410 67.8
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 4.5e-170 601.7 410 67.8
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 1.3e-169 600.1 404 69.3
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 2.2e-169 599.4 403 69.0
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 6.5e-169 597.8 406 70.0
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 2.5e-168 595.9 398 69.1
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 4.2e-168 595.1 386 70.5
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 5.5e-168 594.7 386 70.7
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 5.5e-168 594.7 414 67.9
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 2.7e-167 592.4 383 72.1
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 4.6e-167 591.7 386 69.9
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 6.0e-167 591.3 398 67.8
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 6.0e-167 591.3 394 69.5
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 7.9e-167 590.9 392 69.4
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 2.3e-166 589.3 409 67.5
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 3.0e-166 589.0 366 74.0
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 3.0e-166 589.0 455 64.8
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.9e-166 588.6 386 70.2
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 5.1e-166 588.2 403 68.0
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 8.7e-166 587.4 385 69.6
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 1.5e-165 586.6 385 69.6
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 2.5e-165 585.9 406 66.7
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 5.7e-165 584.7 425 66.4
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 4.8e-164 581.6 410 65.9
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 1.1e-163 580.5 410 66.3
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 5.3e-163 578.2 398 68.1
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 1.2e-162 577.0 398 67.8
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 1.5e-162 576.6 391 66.8
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 2.6e-162 575.9 400 68.5
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 2.6e-162 575.9 421 66.7
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.6e-162 575.9 406 66.5
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 4.5e-162 575.1 410 65.1
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.7e-161 573.2 418 63.9
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.2e-160 568.9 413 66.3
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 2.7e-159 565.8 391 67.5
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 4.6e-159 565.1 352 74.4
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 4.6e-159 565.1 396 66.4
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 7.9e-159 564.3 387 68.0
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 7.9e-159 564.3 399 64.7
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 1.0e-158 563.9 418 63.2
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 5.1e-158 561.6 419 63.5
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 2.2e-156 556.2 393 66.2
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 1.8e-155 553.1 403 64.0
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.9e-152 543.1 395 65.1
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 4.2e-152 542.0 398 62.8
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.8e-147 526.6 392 62.2
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 1.2e-143 513.8 465 54.6
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.1e-143 513.1 362 65.5
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 3.0e-142 509.2 393 62.1
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.0e-141 506.5 438 57.1
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 9.7e-141 504.2 350 65.7
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 7.0e-139 498.0 350 66.0
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.5e-138 495.7 389 62.2
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 2.1e-135 486.5 398 59.8
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 1.5e-133 480.3 363 60.3
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.7e-130 469.5 413 58.8
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 3.8e-129 465.7 431 53.4
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 4.7e-127 458.8 350 61.4
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 6.1e-127 458.4 287 75.6
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 5.7e-125 451.8 367 58.6
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 6.3e-124 448.4 333 65.8
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 8.0e-119 431.4 306 64.7
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 7.5e-109 398.3 366 54.4
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 6.4e-108 395.2 397 50.1
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 9.5e-104 381.3 254 69.3
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 2.5e-96 356.7 429 48.7
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 6.4e-92 342.0 386 44.8
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 4.6e-90 335.9 213 68.5
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 3.0e-89 333.2 360 45.3
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 3.9e-89 332.8 249 62.2
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 1.1e-88 331.3 391 48.3
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.5e-88 330.1 249 61.8
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 4.0e-86 322.8 404 41.6
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 6.9e-78 295.4 397 39.8
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 3.8e-76 289.7 393 40.5
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.7e-74 283.5 373 40.2
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.3e-71 274.6 212 60.4
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 3.4e-69 266.5 163 73.0
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 6.2e-63 245.7 221 57.9
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 6.9e-62 242.3 213 55.9
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 4.5e-61 239.6 158 70.3
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.2e-58 231.5 197 55.8
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 3.5e-50 203.4 294 40.8
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 6.7e-49 199.1 129 70.5
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.9e-48 197.6 137 67.2
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 4.3e-48 196.4 121 74.4
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 4.3e-48 196.4 295 41.4
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 2.2e-39 167.5 94 78.7
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 1.4e-35 154.8 107 65.4
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 2.6e-29 134.0 126 53.2
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 5.9e-29 132.9 90 58.9
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 3.6e-26 123.6 107 56.1
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.1e-14 85.5 77 51.9
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 6.1e-10 69.7 42 81.0
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.0e-09 68.9 116 36.2
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 2.2e-07 61.2 63 50.8
MD02G1139000 Malus domestica HOM05D006805 ORTHO05D245225 2.8e-07 60.8 50 62.0


User provided reference genes

Program Settings