Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.7e-45 185.7 92 100.0
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 1.1e-41 172.9 92 90.2
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 2.1e-40 168.7 92 91.3
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 2.7e-40 168.3 92 88.0
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 2.7e-40 168.3 92 88.0
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 3.6e-40 167.9 92 88.0
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 4.7e-40 167.5 92 88.0
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 4.7e-40 167.5 92 88.0
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 4.7e-40 167.5 92 88.0
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 6.1e-40 167.2 91 86.8
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 1.8e-39 165.6 92 87.0
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.8e-39 165.6 90 93.3
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 2.3e-39 165.2 87 90.8
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 2.3e-39 165.2 92 87.0
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 5.2e-39 164.1 86 93.0
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 6.7e-39 163.7 92 85.9
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 6.7e-39 163.7 92 84.8
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 6.7e-39 163.7 92 83.7
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 8.8e-39 163.3 92 83.7
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 1.1e-38 162.9 89 89.9
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 1.5e-38 162.5 92 84.8
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 1.5e-38 162.5 92 84.8
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 1.5e-38 162.5 92 84.8
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 3.3e-38 161.4 89 85.4
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 4.4e-38 161.0 92 82.6
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 5.7e-38 160.6 88 88.6
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 7.4e-38 160.2 92 84.8
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 7.4e-38 160.2 92 83.7
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 9.7e-38 159.8 89 86.5
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 9.7e-38 159.8 89 86.5
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 9.7e-38 159.8 89 86.5
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 1.3e-37 159.5 92 84.8
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 1.3e-37 159.5 92 82.6
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 1.7e-37 159.1 89 86.5
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 1.7e-37 159.1 92 82.6
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 1.7e-37 159.1 92 82.6
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 2.2e-37 158.7 93 83.9
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 2.2e-37 158.7 89 83.1
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 2.2e-37 158.7 89 83.1
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 2.8e-37 158.3 92 80.4
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 2.8e-37 158.3 89 85.4
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 2.8e-37 158.3 92 81.5
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 3.7e-37 157.9 89 84.3
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 3.7e-37 157.9 89 85.4
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 3.7e-37 157.9 89 83.1
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 4.8e-37 157.5 92 83.7
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 4.8e-37 157.5 92 82.6
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 6.3e-37 157.1 91 83.5
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.1e-36 156.4 92 81.5
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 1.1e-36 156.4 92 83.7
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 1.8e-36 155.6 88 83.0
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 1.8e-36 155.6 88 81.8
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 2.4e-36 155.2 92 80.4
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 3.1e-36 154.8 88 83.0
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 4.1e-36 154.5 92 78.3
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 4.1e-36 154.5 87 85.1
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 5.3e-36 154.1 89 80.9
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 5.3e-36 154.1 89 80.9
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 7.0e-36 153.7 92 80.4
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 9.1e-36 153.3 91 81.3
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 9.1e-36 153.3 91 81.3
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 9.1e-36 153.3 92 80.4
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 1.2e-35 152.9 92 80.4
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 1.6e-35 152.5 87 81.6
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 1.6e-35 152.5 88 81.8
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 2.0e-35 152.1 92 80.4
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 2.6e-35 151.8 88 79.5
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 3.5e-35 151.4 89 83.1
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 5.9e-35 150.6 88 78.4
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 76.1
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 1.7e-34 149.1 89 77.5
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 2.2e-34 148.7 89 78.7
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 5.0e-34 147.5 92 79.3
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 6.5e-34 147.1 92 78.3
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 1.1e-33 146.4 92 78.3
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 1.1e-33 146.4 92 78.3
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 1.1e-33 146.4 92 78.3
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 1.5e-33 146.0 92 77.2
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.9e-33 145.6 84 83.3
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 2.5e-33 145.2 92 77.2
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 2.5e-33 145.2 92 77.2
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 2.5e-33 145.2 92 77.2
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 2.5e-33 145.2 92 77.2
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 2.5e-33 145.2 92 77.2
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 5.5e-33 144.1 92 76.1
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 5.5e-33 144.1 84 82.1
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 9.4e-33 143.3 92 76.1
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 9.4e-33 143.3 92 76.1
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 9.4e-33 143.3 92 76.1
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 9.4e-33 143.3 92 76.1
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 1.2e-32 142.9 92 76.1
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 1.2e-32 142.9 92 76.1
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 1.2e-32 142.9 92 76.1
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 3.6e-32 141.4 89 76.4
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 8.0e-32 140.2 82 82.9
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 1.8e-31 139.0 92 75.0
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 1.8e-31 139.0 92 75.0
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 4.0e-31 137.9 135 55.6
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 5.7e-30 134.0 144 55.6
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 9.7e-30 133.3 119 58.8
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 4.8e-29 131.0 88 70.5
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 4.8e-29 131.0 88 70.5
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 8.2e-29 130.2 92 71.7
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 5.3e-28 127.5 120 58.3
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 1.7e-26 122.5 66 87.9
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 1.7e-26 122.5 66 89.4
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 2.2e-26 122.1 73 76.7
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 3.8e-26 121.3 66 89.4
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 1.2e-24 116.3 66 83.3
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 3.6e-24 114.8 118 57.6
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 8.0e-24 113.6 91 63.7
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 1.0e-23 113.2 65 81.5
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 3.7e-21 104.8 60 81.7
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 4.1e-20 101.3 57 86.0
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 1.7e-18 95.9 89 60.7
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 3.8e-18 94.7 94 58.5
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 5.0e-18 94.4 94 54.3
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 3.4e-14 81.6 83 45.8
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 4.4e-14 81.3 266 27.8
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 2.8e-13 78.6 84 47.6
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 3.7e-13 78.2 71 47.9
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 4.9e-13 77.8 66 65.2
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 1.8e-12 75.9 56 67.9
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 5.9e-11 70.9 72 54.2
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 8.6e-10 67.0 72 51.4
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 2.3e-07 58.9 67 44.8
Ciclev10027020m.g Citrus clementina HOM05D006364 ORTHO05D007968 1.2e-06 56.6 137 37.2
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.5e-06 56.2 52 48.1
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 2.0e-06 55.8 71 36.6
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 3.4e-06 55.1 52 55.8


User provided reference genes

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