Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 0.0e+00 1986.5 1001 100.0
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 0.0e+00 1526.9 1020 79.0
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 4.8e-146 523.1 1002 37.4
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 2.4e-145 520.8 1021 37.7
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 2.1e-141 507.7 1017 37.5
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 1.9e-139 501.1 1026 35.6
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 2.1e-138 497.7 992 37.5
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.4e-137 495.0 628 47.0
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 5.3e-137 493.0 1024 35.3
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 6.9e-137 492.7 1010 37.1
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 3.5e-133 480.3 1017 35.6
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 3.0e-132 477.2 1014 35.7
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 1.1e-131 475.3 1015 36.1
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 2.4e-129 467.6 1039 34.7
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 4.0e-129 466.8 1040 35.9
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 8.4e-127 459.1 986 35.1
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 1.2e-125 455.3 600 45.8
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 6.7e-124 449.5 986 34.8
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.5e-123 448.4 997 35.1
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 4.3e-123 446.8 1025 35.1
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 7.4e-123 446.0 987 35.4
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 1.3e-122 445.3 631 44.4
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 7.6e-120 436.0 988 34.1
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 2.5e-118 431.0 642 42.5
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 2.1e-117 427.9 605 44.6
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.7e-117 427.6 1010 34.6
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 3.9e-116 423.7 1027 33.0
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 6.7e-116 422.9 574 45.6
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 2.8e-114 417.5 574 44.8
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 7.7e-112 409.5 580 44.3
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 5.5e-110 403.3 1020 32.5
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 7.7e-104 382.9 670 39.0
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 2.2e-103 381.3 632 41.9
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 1.9e-102 378.3 669 39.5
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 5.5e-102 376.7 569 42.9
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 1.6e-101 375.2 949 33.5
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 4.8e-98 363.6 528 41.9
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 1.1e-97 362.5 654 39.8
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 2.4e-97 361.3 620 38.9
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 3.1e-97 360.9 568 40.5
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 9.1e-97 359.4 669 36.8
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 7.7e-96 356.3 600 38.5
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 2.9e-95 354.4 547 41.9
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 6.5e-95 353.2 1072 30.8
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 1.5e-94 352.1 491 42.8
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 2.1e-93 348.2 516 43.8
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 2.3e-92 344.7 1054 29.8
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 1.5e-91 342.0 528 40.5
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 1.3e-90 339.0 539 41.0
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 3.7e-90 337.4 637 37.7
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 9.1e-89 332.8 515 41.7
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 5.0e-87 327.0 546 39.7
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 6.5e-87 326.6 918 30.1
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 8.5e-87 326.2 550 39.6
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 1.5e-86 325.5 600 39.3
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 2.5e-86 324.7 578 39.6
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 2.7e-85 321.2 649 37.4
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 4.7e-85 320.5 562 39.3
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 1.4e-84 318.9 1063 29.4
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 5.2e-84 317.0 601 38.6
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 6.8e-84 316.6 644 36.3
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 6.8e-84 316.6 645 36.7
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 1.3e-82 312.4 925 30.1
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 2.2e-82 311.6 525 39.0
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 2.2e-82 311.6 656 36.3
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 6.3e-82 310.1 622 36.7
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 1.1e-81 309.3 738 34.6
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 1.8e-81 308.5 622 36.8
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 2.4e-81 308.1 569 36.9
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 5.9e-80 303.5 489 40.1
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 1.1e-78 299.3 523 39.0
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 3.2e-78 297.7 579 39.2
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 1.2e-77 295.8 619 36.7
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 1.6e-77 295.4 652 33.7
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 2.7e-77 294.7 620 34.5
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 3.6e-77 294.3 545 37.4
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 8.0e-77 293.1 819 30.3
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 8.0e-77 293.1 652 35.1
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 1.8e-76 292.0 538 37.9
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 5.2e-76 290.4 286 57.3
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 5.7e-75 287.0 708 33.6
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 4.9e-74 283.9 640 34.5
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 1.1e-73 282.7 546 37.5
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 1.1e-73 282.7 546 37.5
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 2.4e-73 281.6 687 32.5
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 3.1e-73 281.2 428 43.0
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 2.7e-72 278.1 541 37.0
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 4.5e-72 277.3 611 34.2
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 2.3e-71 275.0 629 34.3
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 4.7e-69 267.3 743 31.4
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 5.7e-67 260.4 770 31.4
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 2.4e-65 255.0 664 33.0
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 7.8e-64 250.0 663 32.6
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 1.3e-63 249.2 408 42.2
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 2.6e-59 235.0 599 31.9
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 1.3e-58 232.6 514 34.0
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 1.2e-53 216.1 444 39.6
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 4.7e-53 214.2 558 33.7
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 4.6e-48 197.6 513 30.4
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 1.9e-46 192.2 385 36.6
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 1.6e-45 189.1 588 30.1
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 2.8e-45 188.3 588 30.1
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 8.1e-45 186.8 580 30.3
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.5e-43 182.6 339 34.5
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 4.4e-43 181.0 709 27.6
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 7.1e-41 173.7 516 26.9
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 8.6e-39 166.8 167 52.7
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.2e-19 103.2 141 39.7
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 4.6e-16 91.3 221 33.0
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 3.3e-14 85.1 407 25.3
Dinv43435 Davidia involucrata HOM05D001393 ORTHO05D007477 2.9e-10 72.0 123 35.0
TAR623G1737 Trochodendron aralioides HOM05D001393 ORTHO05D007477 3.2e-09 68.6 162 32.1
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 4.2e-09 68.2 97 41.2
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 8.7e-07 60.5 459 22.4
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 8.7e-07 60.5 459 22.4
Mapoly0003s0122 Marchantia polymorpha HOM05D020720 ORTHO05D007477 4.3e-06 58.2 156 29.5


User provided reference genes

Program Settings