Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI73G0293 Tripterygium wilfordii HOM05D006665 ORTHO05D008327 5.9e-219 763.8 371 100.0
GSVIVG01021249001 Vitis vinifera HOM05D006665 ORTHO05D008327 1.6e-163 579.7 370 73.5
Manes.17G058400 Manihot esculenta HOM05D006665 ORTHO05D008327 7.9e-163 577.4 372 74.7
Cfa000642 Carpinus fangiana HOM05D006665 ORTHO05D008327 3.9e-162 575.1 370 74.3
Sabra11G0053800 Salix brachista HOM05D006665 ORTHO05D008327 5.6e-161 571.2 374 74.6
Potri.011G069700 Populus trichocarpa HOM05D006665 ORTHO05D008327 2.8e-160 568.9 374 73.3
Ciclev10015641m.g Citrus clementina HOM05D006665 ORTHO05D008327 6.2e-160 567.8 372 74.2
QL05p048519 Quercus lobata HOM05D006665 ORTHO05D008327 3.1e-159 565.5 372 74.2
PGR042G0915 Punica granatum HOM05D006665 ORTHO05D008327 7.6e-158 560.8 371 71.2
Eucgr.E04353 Eucalyptus grandis HOM05D006665 ORTHO05D008327 2.2e-157 559.3 373 71.8
Eucgr.E02766 Eucalyptus grandis HOM05D006665 ORTHO05D008327 1.1e-156 557.0 373 71.3
TAR627G0088 Trochodendron aralioides HOM05D006665 ORTHO05D008327 2.5e-156 555.8 373 70.0
COL.COLO4_31251 Corchorus olitorius HOM05D006665 ORTHO05D008327 4.2e-156 555.1 393 69.0
Thecc.06G166800 Theobroma cacao HOM05D006665 ORTHO05D008327 1.0e-154 550.4 374 70.6
CSS0008142 Camellia sinensis var. sinensis HOM05D006665 ORTHO05D008327 1.3e-154 550.1 369 71.8
Duzib235G0558 Durio zibethinus HOM05D006665 ORTHO05D008327 3.0e-154 548.9 374 69.0
THA.LOC104812882 Tarenaya hassleriana HOM05D006665 ORTHO05D008327 8.7e-154 547.4 374 68.7
Gorai.011G037800 Gossypium raimondii HOM05D006665 ORTHO05D008327 3.3e-153 545.4 373 68.1
Gohir.A10G035200 Gossypium hirsutum HOM05D006665 ORTHO05D008327 4.3e-153 545.0 373 68.4
Gohir.D10G035900 Gossypium hirsutum HOM05D006665 ORTHO05D008327 4.3e-153 545.0 373 68.1
Nn3g21119 Nelumbo nucifera HOM05D006665 ORTHO05D008327 6.3e-152 541.2 372 66.9
CiPaw.09G072200 Carya illinoinensis HOM05D006665 ORTHO05D008327 5.3e-151 538.1 373 71.0
Cc02_g15490 Coffea canephora HOM05D006665 ORTHO05D008327 5.3e-151 538.1 375 69.1
HanXRQChr15g0480791 Helianthus annuus HOM05D006665 ORTHO05D008327 2.2e-149 532.7 369 68.8
Lalb_Chr13g0295211 Lupinus albus HOM05D006665 ORTHO05D008327 8.4e-149 530.8 373 68.1
Prupe.4G065800 Prunus persica HOM05D006665 ORTHO05D008327 1.1e-148 530.4 371 69.0
CANSAT80G2447 Cannabis sativa HOM05D000074 ORTHO05D000220 2.5e-148 529.3 370 69.7
PSO170G0566 Papaver somniferum HOM05D000074 ORTHO05D000220 3.2e-148 528.9 377 67.4
Sabra11G0057300 Salix brachista HOM05D000074 ORTHO05D000220 2.1e-147 526.2 351 73.5
FvH4_1g07520 Fragaria vesca HOM05D006665 ORTHO05D008327 1.8e-146 523.1 372 69.1
RcHm_v2.0_Chr5g0011451 Rosa chinensis HOM05D006665 ORTHO05D008327 1.8e-146 523.1 372 69.1
FAN26G0384 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.1e-145 520.4 372 68.5
FAN23G0824 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.9e-145 519.6 372 68.5
Dinv32346 Davidia involucrata HOM05D006665 ORTHO05D008327 5.7e-145 518.1 374 67.9
CsaV3_1G033140 Cucumis sativus L. HOM05D006665 ORTHO05D008327 1.6e-144 516.5 372 65.9
FAN19G1242 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.6e-144 516.5 373 68.6
Aqoxy4G00257 Aquilegia oxysepala HOM05D006665 ORTHO05D008327 1.1e-143 513.8 373 64.3
MD05G1296500 Malus domestica HOM05D006665 ORTHO05D008327 1.1e-143 513.8 371 67.1
Carub.0008s0223 Capsella rubella HOM05D006665 ORTHO05D008327 3.1e-143 512.3 371 64.4
MBI07_g09544_MAGBIO Magnolia biondii HOM05D006665 ORTHO05D008327 9.0e-143 510.8 377 64.5
Sed0010934 Sechium edule HOM05D006665 ORTHO05D008327 9.0e-143 510.8 371 65.2
AL8G12850 Arabidopsis lyrata HOM05D006665 ORTHO05D008327 1.2e-142 510.4 371 64.2
Sp2g10670 Schrenkiella parvula HOM05D006665 ORTHO05D008327 1.2e-142 510.4 371 65.5
CARHR176220 Cardamine hirsuta HOM05D006665 ORTHO05D008327 1.5e-142 510.0 369 64.8
AT5G45760 Arabidopsis thaliana HOM05D006665 ORTHO05D008327 2.6e-142 509.2 371 64.4
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 1.0e-141 507.3 367 65.1
Lj2C318T4 Lonicera japonica HOM05D006665 ORTHO05D008327 3.2e-140 502.3 375 66.1
ECA236G1698 Erigeron canadensis HOM05D000074 ORTHO05D000220 1.2e-139 500.4 362 64.9
PGSC0003DMG400028425 Solanum tuberosum HOM05D006665 ORTHO05D008327 1.2e-139 500.4 374 63.9
Nitab4.5_0008526g0030 Nicotiana tabacum HOM05D006665 ORTHO05D008327 2.7e-139 499.2 372 63.4
Sopen02g021210 Solanum pennellii HOM05D006665 ORTHO05D008327 2.7e-139 499.2 374 63.6
Nitab4.5_0000437g0180 Nicotiana tabacum HOM05D006665 ORTHO05D008327 3.6e-139 498.8 381 62.7
Solyc02g072230.3 Solanum lycopersicum HOM05D006665 ORTHO05D008327 3.6e-139 498.8 374 63.4
MSTRG.7424 Avicennia marina HOM05D006665 ORTHO05D008327 7.9e-139 497.7 372 65.9
Sc05g0006960 Simmondsia chinensis HOM05D006665 ORTHO05D008327 1.0e-138 497.3 370 63.8
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 2.3e-138 496.1 367 64.0
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 1.5e-137 493.4 365 63.6
DCAR_005186 Daucus carota HOM05D006665 ORTHO05D008327 1.5e-137 493.4 374 62.6
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 9.7e-137 490.7 367 63.5
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 1.3e-136 490.3 358 64.5
Phvul.002G240300 Phaseolus vulgaris HOM05D006665 ORTHO05D008327 1.2e-134 483.8 372 62.1
ClCG03G007500 Citrullus lanatus HOM05D000074 ORTHO05D000220 2.6e-134 482.6 370 64.9
Thhalv10000923m.g Eutrema salsugineum HOM05D006665 ORTHO05D008327 5.9e-134 481.5 395 60.3
Glyma.05G160032 Glycine max HOM05D006665 ORTHO05D008327 5.9e-134 481.5 372 62.1
Glyma.08G117600 Glycine max HOM05D006665 ORTHO05D008327 8.5e-133 477.6 372 61.3
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 1.4e-132 476.9 359 63.2
FAN26G1216 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.9e-132 476.5 372 64.8
Medtr8g086605 Medicago truncatula HOM05D006665 ORTHO05D008327 2.1e-131 473.0 371 62.8
Migut.M01013 Erythranthe guttata HOM05D006665 ORTHO05D008327 2.7e-131 472.6 373 61.1
TPR.G6756 Trifolium pratense HOM05D006665 ORTHO05D008327 3.0e-130 469.2 371 62.0
Aa31LG9G7310 Aethionema arabicum HOM05D006665 ORTHO05D008327 2.0e-129 466.5 380 62.4
Lj4g0005276 Lotus japonicus HOM05D000074 ORTHO05D008327 5.7e-129 464.9 367 61.6
EL10Ac8g20571 Beta vulgaris HOM05D006665 ORTHO05D008327 2.9e-125 452.6 369 60.4
arahy.Tifrunner.gnm1.ann1.L41MS4 Arachis hypogaea HOM05D006665 ORTHO05D008327 8.5e-125 451.1 373 60.3
Peaxi162Scf00371g00319 Petunia axillaris HOM05D006665 ORTHO05D008327 1.6e-123 446.8 372 58.6
AUR62027710 Chenopodium quinoa HOM05D006665 ORTHO05D008327 8.8e-122 441.0 360 58.9
arahy.Tifrunner.gnm1.ann1.UF726L Arachis hypogaea HOM05D006665 ORTHO05D008327 3.3e-121 439.1 369 59.6
Os01g0205100 Oryza sativa ssp. japonica HOM05D006665 ORTHO05D008327 2.7e-118 429.5 370 57.3
Actinidia07650 Actinidia chinensis HOM05D006665 ORTHO05D008327 4.1e-111 405.6 261 72.0
SEGI_17628 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 2.0e-102 376.7 382 48.4
ATR0012G051 Amborella trichopoda HOM05D006665 ORTHO05D008327 7.3e-100 368.2 308 58.8
SalBow8G2667 Salvia bowleyana HOM05D000074 ORTHO05D000220 1.8e-98 363.6 389 49.4
Ah.14g087040 Amaranthus hybridus HOM05D006665 ORTHO05D008327 7.8e-94 348.2 393 49.1
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 1.0e-85 321.2 349 49.3
Atru.chr10.1583 Acer truncatum HOM05D006665 ORTHO05D008327 1.4e-82 310.8 184 75.5
Zm00001eb120830 Zea mays HOM05D006665 ORTHO05D008327 2.3e-82 310.1 295 53.2
Pp3c18_2320 Physcomitrium patens HOM05D006665 ORTHO05D008327 1.5e-81 307.4 379 42.7
vmacro16044 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 1.2e-70 271.2 222 62.2
Mapoly0020s0147 Marchantia polymorpha HOM05D006665 ORTHO05D008327 6.0e-70 268.9 370 40.3
AagrBONN_evm.TU.Sc2ySwM_117.2766 Anthoceros agrestis HOM05D006665 ORTHO05D008327 1.1e-68 264.6 314 41.7
SMO118G0425 Selaginella moellendorffii HOM05D006665 ORTHO05D008327 4.7e-67 259.2 377 38.5
Rhsim02G0145600 Rhododendron simsii HOM05D006665 ORTHO05D008327 3.8e-64 249.6 206 63.1
VMungo0251G1318 Vigna mungo HOM05D006665 ORTHO05D008327 8.4e-64 248.4 217 58.1
Lsat_1_v5_gn_7_25921 Lactuca sativa HOM05D006665 ORTHO05D008327 2.4e-63 246.9 205 61.0
Cpa.g.sc7.98 Carica papaya HOM05D006665 ORTHO05D008327 3.5e-62 243.0 149 71.8
Atru.chr10.1584 Acer truncatum HOM05D006665 ORTHO05D008327 2.3e-61 240.4 183 67.8
BcaB06g27285 Brassica carinata HOM05D006665 ORTHO05D008327 9.6e-60 235.0 248 50.0
CBR_g34019 Chara braunii HOM05D006665 ORTHO05D008327 1.4e-58 231.1 405 35.3
Haze_06187 Corylus avellana HOM05D006665 ORTHO05D008327 3.1e-58 229.9 185 67.6
Dinv12760 Davidia involucrata HOM05D006665 ORTHO05D008327 2.0e-57 227.3 252 49.6
Hma1.2p1_0113F.1_g055090 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 5.6e-52 209.1 209 56.0
Hma1.2p1_0113F.1_g055096 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 5.6e-52 209.1 209 56.0
AUR62039464 Chenopodium quinoa HOM05D006665 ORTHO05D008327 8.1e-51 205.3 186 58.1
Hund25815 Selenicereus undatus HOM05D006665 ORTHO05D008327 5.5e-47 192.6 179 58.1
SGA_v2.0_scaffold1G00072 Striga asiatica HOM05D006665 ORTHO05D008327 2.3e-45 187.2 126 65.9
BcaB04g18653 Brassica carinata HOM05D006665 ORTHO05D008327 6.7e-45 185.7 152 61.2
vmacro16043 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 4.8e-43 179.5 102 80.4
Haze_06186 Corylus avellana HOM05D006665 ORTHO05D008327 8.1e-43 178.7 148 60.8
Psat7g069080 Pisum sativum HOM05D006665 ORTHO05D008327 4.9e-40 169.5 122 62.3
Oeu043117.1 Olea europaea HOM05D006665 ORTHO05D008327 1.2e-38 164.9 146 55.5
Psat2g000080 Pisum sativum HOM05D006665 ORTHO05D008327 8.7e-37 158.7 139 59.0
Psat7g069040 Pisum sativum HOM05D006665 ORTHO05D008327 8.2e-35 152.1 261 37.5
RcHm_v2.0_Chr5g0011471 Rosa chinensis HOM05D006665 ORTHO05D008327 4.5e-33 146.4 173 45.7
SEGI_34445 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 2.6e-25 120.6 103 49.5
Cre16.g678400 Chlamydomonas reinhardtii HOM05D006665 ORTHO05D008327 5.0e-24 116.3 176 34.1
arahy.Tifrunner.gnm1.ann1.XDX40G Arachis hypogaea HOM05D006665 ORTHO05D008327 8.5e-24 115.5 78 66.7
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 1.0e-21 108.6 98 56.1
MCO11G387 Micromonas commoda HOM05D006665 ORTHO05D008327 4.5e-17 93.2 471 21.9
FAN25G1258 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.9e-15 87.8 65 73.8
FAN11G1287 Fragaria x ananassa HOM05D006665 ORTHO05D008327 3.9e-13 80.1 175 36.0
VMungo0251G0552 Vigna mungo HOM05D006665 ORTHO05D008327 5.2e-13 79.7 75 45.3
FvH4_3g07410 Fragaria vesca HOM05D006665 ORTHO05D008327 8.8e-13 79.0 159 40.3
Sabra04G0038600 Salix brachista HOM05D000074 ORTHO05D000220 2.0e-12 77.8 114 45.6
arahy.Tifrunner.gnm1.ann1.IN0C4L Arachis hypogaea HOM05D006665 ORTHO05D012122 4.2e-07 60.1 69 46.4


User provided reference genes

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