Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI63G1683 Tripterygium wilfordii HOM05D005176 ORTHO05D006482 5.5e-209 730.7 367 100.0
TWI38G1933 Tripterygium wilfordii HOM05D005176 ORTHO05D006482 3.0e-191 671.8 358 93.6
Cpa.g.sc152.62 Carica papaya HOM05D005176 ORTHO05D006482 1.3e-146 523.5 354 74.9
Eucgr.E03960 Eucalyptus grandis HOM05D005176 ORTHO05D006482 3.4e-142 508.8 357 71.1
COL.COLO4_31852 Corchorus olitorius HOM05D005176 ORTHO05D006482 1.6e-139 500.0 350 72.9
Oeu002752.3 Olea europaea HOM05D005176 ORTHO05D006482 1.6e-139 500.0 305 77.4
Hma1.2p1_0660F.1_g197450 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 2.7e-139 499.2 358 69.6
Gorai.009G182200 Gossypium raimondii HOM05D005176 ORTHO05D006482 3.0e-138 495.7 356 71.3
Thecc.06G230100 Theobroma cacao HOM05D005176 ORTHO05D006482 3.9e-138 495.4 356 71.3
CANSAT56G2407 Cannabis sativa HOM05D005176 ORTHO05D006482 5.1e-138 495.0 356 68.8
FvH4_3g01250 Fragaria vesca HOM05D005176 ORTHO05D006482 6.6e-138 494.6 369 68.6
MD10G1328600 Malus domestica HOM05D005176 ORTHO05D006482 8.7e-138 494.2 353 69.7
Lj1A1237T47 Lonicera japonica HOM05D005176 ORTHO05D006482 1.1e-137 493.8 361 70.4
Aqoxy1G04164 Aquilegia oxysepala HOM05D005176 ORTHO05D006482 3.3e-137 492.3 366 66.9
Gohir.A05G173800 Gossypium hirsutum HOM05D005176 ORTHO05D006482 7.3e-137 491.1 356 70.8
Prupe.4G013400 Prunus persica HOM05D005176 ORTHO05D006482 7.3e-137 491.1 356 71.3
Sabra11G0011400 Salix brachista HOM05D005176 ORTHO05D006482 7.3e-137 491.1 361 69.5
Sabra11G0013200 Salix brachista HOM05D005176 ORTHO05D006482 7.3e-137 491.1 361 69.5
Migut.M01360 Erythranthe guttata HOM05D005176 ORTHO05D006482 1.3e-136 490.3 366 68.6
Rhsim13G0148600 Rhododendron simsii HOM05D005176 ORTHO05D006482 1.3e-136 490.3 353 71.1
PGSC0003DMG400013335 Solanum tuberosum HOM05D005176 ORTHO05D006482 1.3e-136 490.3 364 68.4
Solyc11g011990.2 Solanum lycopersicum HOM05D005176 ORTHO05D006482 2.8e-136 489.2 361 68.1
Haze_06890 Corylus avellana HOM05D005176 ORTHO05D006482 1.1e-135 487.3 364 69.2
Sopen11g006800 Solanum pennellii HOM05D005176 ORTHO05D006482 1.1e-135 487.3 361 68.1
RcHm_v2.0_Chr5g0001781 Rosa chinensis HOM05D005176 ORTHO05D006482 1.4e-135 486.9 359 69.1
Dinv20117 Davidia involucrata HOM05D005176 ORTHO05D006482 1.8e-135 486.5 351 70.9
Nn1g03357 Nelumbo nucifera HOM05D005176 ORTHO05D006482 2.0e-134 483.0 306 75.8
Ciclev10015546m.g Citrus clementina HOM05D005176 ORTHO05D006482 2.6e-134 482.6 362 70.4
FAN25G2381 Fragaria x ananassa HOM05D005176 ORTHO05D006482 3.4e-134 482.3 372 67.2
Potri.011G021800 Populus trichocarpa HOM05D005176 ORTHO05D006482 4.5e-134 481.9 361 69.8
QL03p008214 Quercus lobata HOM05D005176 ORTHO05D006482 5.8e-134 481.5 359 68.0
QL05p070074 Quercus lobata HOM05D005176 ORTHO05D006482 5.8e-134 481.5 353 69.1
Manes.16G002000 Manihot esculenta HOM05D005176 ORTHO05D006482 7.6e-134 481.1 363 68.3
TAR626G1813 Trochodendron aralioides HOM05D005176 ORTHO05D006482 7.6e-134 481.1 361 66.8
PGR042G2916 Punica granatum HOM05D005176 ORTHO05D006482 3.8e-133 478.8 360 68.3
CSS0003829 Camellia sinensis var. sinensis HOM05D005176 ORTHO05D006482 6.4e-133 478.0 347 69.5
Gohir.D05G176800 Gossypium hirsutum HOM05D005176 ORTHO05D006482 6.4e-133 478.0 354 70.1
MELO3C021713.2 Cucumis melo HOM05D005176 ORTHO05D006482 1.1e-132 477.2 351 67.8
SalBow8G4341 Salvia bowleyana HOM05D005176 ORTHO05D006482 2.4e-132 476.1 321 72.9
CAN.G1186.9 Capsicum annuum HOM05D005176 ORTHO05D006482 5.4e-132 474.9 304 74.7
vmacro03656 Vaccinium macrocarpon HOM05D005176 ORTHO05D006482 5.4e-132 474.9 368 67.9
CiPaw.09G100100 Carya illinoinensis HOM05D005176 ORTHO05D006482 2.7e-131 472.6 353 67.4
Sc05g0009510 Simmondsia chinensis HOM05D005176 ORTHO05D006482 3.0e-130 469.2 315 73.0
arahy.Tifrunner.gnm1.ann1.E5J967 Arachis hypogaea HOM05D005176 ORTHO05D006482 4.3e-129 465.3 341 70.4
Sabra04G0001100 Salix brachista HOM05D005176 ORTHO05D006482 4.3e-129 465.3 364 65.9
DCAR_004870 Daucus carota HOM05D005176 ORTHO05D006482 7.4e-129 464.5 331 68.9
Actinidia26877 Actinidia chinensis HOM05D005176 ORTHO05D006482 9.6e-129 464.2 334 71.3
AUR62012769 Chenopodium quinoa HOM05D005176 ORTHO05D006482 1.3e-128 463.8 358 67.0
Potri.004G002600 Populus trichocarpa HOM05D005176 ORTHO05D006482 1.6e-128 463.4 312 71.8
THA.LOC104812984 Tarenaya hassleriana HOM05D005176 ORTHO05D006482 3.7e-128 462.2 358 64.5
arahy.Tifrunner.gnm1.ann1.8PRB68 Arachis hypogaea HOM05D005176 ORTHO05D006482 6.2e-128 461.5 355 68.7
Lsat_1_v5_gn_7_14460 Lactuca sativa HOM05D005176 ORTHO05D006482 1.1e-127 460.7 359 65.2
EL10Ac8g20147 Beta vulgaris HOM05D005176 ORTHO05D006482 1.4e-127 460.3 361 67.6
Cfa000134 Carpinus fangiana HOM05D005176 ORTHO05D006482 2.4e-127 459.5 331 71.3
Atru.chr10.2310 Acer truncatum HOM05D005176 ORTHO05D006482 5.3e-127 458.4 340 69.1
Hund21443 Selenicereus undatus HOM05D005176 ORTHO05D006482 6.9e-127 458.0 374 63.4
Sp7g20380 Schrenkiella parvula HOM05D005176 ORTHO05D006482 2.6e-126 456.1 326 69.9
TPR.G13024 Trifolium pratense HOM05D005176 ORTHO05D006482 3.4e-126 455.7 301 73.8
CARHR229150 Cardamine hirsuta HOM05D005176 ORTHO05D006482 5.8e-126 454.9 356 66.0
AL7G31370 Arabidopsis lyrata HOM05D005176 ORTHO05D006482 7.6e-126 454.5 352 67.0
MSTRG.16005 Avicennia marina HOM05D005176 ORTHO05D006482 1.3e-125 453.8 314 69.4
Lalb_Chr15g0087861 Lupinus albus HOM05D005176 ORTHO05D006482 1.3e-125 453.8 358 67.6
Thhalv10025624m.g Eutrema salsugineum HOM05D005176 ORTHO05D006482 2.9e-125 452.6 311 70.7
PSO832G1336 Papaver somniferum HOM05D005176 ORTHO05D006482 2.9e-125 452.6 369 64.0
Cc09_g01070 Coffea canephora HOM05D005176 ORTHO05D006482 1.1e-124 450.7 348 66.4
Glyma.09G008500 Glycine max HOM05D005176 ORTHO05D006482 3.2e-124 449.1 305 72.8
Phvul.006G144800 Phaseolus vulgaris HOM05D005176 ORTHO05D006482 3.2e-124 449.1 309 71.8
Nitab4.5_0000143g0540 Nicotiana tabacum HOM05D005176 ORTHO05D006482 4.2e-124 448.7 361 65.1
Sed0020812 Sechium edule HOM05D005176 ORTHO05D006482 5.5e-124 448.4 352 64.8
Carub.0007s1906 Capsella rubella HOM05D005176 ORTHO05D006482 7.1e-124 448.0 351 65.8
CsaV3_1G045890 Cucumis sativus L. HOM05D005176 ORTHO05D006482 1.6e-123 446.8 321 68.2
Psat1g177440 Pisum sativum HOM05D005176 ORTHO05D006482 2.1e-123 446.4 353 65.7
Ca_00707_v3 Cicer arietinum L. HOM05D005176 ORTHO05D006482 3.5e-123 445.7 311 71.7
BcaNung03749 Brassica carinata HOM05D005176 ORTHO05D006482 4.6e-123 445.3 325 69.5
VMungo0540G1825 Vigna mungo HOM05D005176 ORTHO05D006482 4.6e-123 445.3 303 71.9
Medtr2g025140 Medicago truncatula HOM05D005176 ORTHO05D006482 7.9e-123 444.5 331 67.7
Glyma.15G112900 Glycine max HOM05D005176 ORTHO05D006482 1.3e-122 443.7 309 70.9
Lj6g0018145 Lotus japonicus HOM05D005176 ORTHO05D006482 3.0e-122 442.6 306 71.9
HanXRQChr05g0129171 Helianthus annuus HOM05D005176 ORTHO05D006482 3.9e-122 442.2 323 67.5
SGA_v2.0_scaffold7G03794 Striga asiatica HOM05D005176 ORTHO05D006482 1.1e-121 440.7 319 68.7
Aa31LG6G4370 Aethionema arabicum HOM05D005176 ORTHO05D006482 2.5e-121 439.5 394 59.4
BolC1t01601H Brassica oleracea HOM05D005176 ORTHO05D006482 2.5e-121 439.5 314 69.4
BcaC09g51146 Brassica carinata HOM05D005176 ORTHO05D006482 3.3e-121 439.1 349 64.8
unitig_748.g7945 Utricularia gibba HOM05D005176 ORTHO05D006482 4.3e-121 438.7 303 71.0
ATR1128G104 Amborella trichopoda HOM05D005176 ORTHO05D006482 1.8e-119 433.3 306 70.6
AT4G22260 Arabidopsis thaliana HOM05D005176 ORTHO05D006482 3.1e-119 432.6 287 74.2
C01p16510 Brassica napus HOM05D005176 ORTHO05D006482 1.3e-117 427.2 340 65.0
BraA01t01306Z Brassica rapa HOM05D005176 ORTHO05D006482 3.8e-117 425.6 352 61.9
PSO210G5061 Papaver somniferum HOM05D005176 ORTHO05D006482 1.8e-114 416.8 368 60.6
Eucgr.E03967 Eucalyptus grandis HOM05D005176 ORTHO05D006482 3.0e-114 416.0 333 64.3
A01p13630 Brassica napus HOM05D005176 ORTHO05D006482 1.1e-113 414.1 343 62.1
TAR624G0457 Trochodendron aralioides HOM05D005176 ORTHO05D006482 1.9e-113 413.3 226 83.2
Os04g0668900 Oryza sativa ssp. japonica HOM05D005176 ORTHO05D006482 3.7e-112 409.1 294 67.7
MBI16_g26179_MAGBIO Magnolia biondii HOM05D005176 ORTHO05D006482 1.4e-111 407.1 373 57.9
Peaxi162Scf00063g00213 Petunia axillaris HOM05D005176 ORTHO05D006482 6.9e-111 404.8 364 60.7
Ah.09g234400 Amaranthus hybridus HOM05D005176 ORTHO05D006482 9.0e-111 404.4 338 63.3
MD05G1354300 Malus domestica HOM05D005176 ORTHO05D006482 1.5e-110 403.7 355 60.0
GSVIVG01006689001 Vitis vinifera HOM05D005176 ORTHO05D006482 2.0e-110 403.3 288 71.9
CDE04G3552 Ceratophyllum demersum HOM05D005176 ORTHO05D006482 1.9e-105 386.7 325 60.0
Nitab4.5_0001198g0240 Nicotiana tabacum HOM05D005176 ORTHO05D006482 1.9e-105 386.7 295 67.8
FAN21G2852 Fragaria x ananassa HOM05D005176 ORTHO05D006482 7.4e-105 384.8 295 66.1
Zm00001eb066910 Zea mays HOM05D005176 ORTHO05D006482 1.3e-104 384.0 298 61.4
SMO200G0146 Selaginella moellendorffii HOM05D005176 ORTHO05D006482 2.8e-104 382.9 272 65.8
MELO3C021708.2 Cucumis melo HOM05D005176 ORTHO05D006482 6.3e-104 381.7 422 53.8
Mapoly0050s0020 Marchantia polymorpha HOM05D005176 ORTHO05D006482 1.4e-103 380.6 258 69.4
Pp3c1_30120 Physcomitrium patens HOM05D005176 ORTHO05D006482 3.4e-102 375.9 318 59.7
Pp3c2_11230 Physcomitrium patens HOM05D005176 ORTHO05D006482 6.3e-96 355.1 296 60.8
CBR_g16017 Chara braunii HOM05D005176 ORTHO05D006482 3.2e-92 342.8 228 70.6
ClCG01G009770 Citrullus lanatus HOM05D005176 ORTHO05D006482 5.3e-87 325.5 322 55.0
Duzib160G0919 Durio zibethinus HOM05D005176 ORTHO05D006482 2.7e-83 313.2 353 51.6
PSO675G3403 Papaver somniferum HOM05D005176 ORTHO05D006482 1.4e-82 310.8 246 63.8
Zm00001eb066920 Zea mays HOM05D005176 ORTHO05D006482 4.0e-82 309.3 254 61.0
Hma1.2p1_2753F.1_g327930 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 3.1e-79 299.7 281 57.7
Dinv13952 Davidia involucrata HOM05D005176 ORTHO05D006482 1.6e-75 287.3 241 63.9
FAN21G2340 Fragaria x ananassa HOM05D005176 ORTHO05D006482 2.7e-75 286.6 239 64.0
PRCOL_00003826 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 1.3e-72 277.7 283 51.2
HPP92_004745 Vanilla planifolia HOM05D005176 ORTHO05D006482 7.7e-70 268.5 241 60.6
MCO02G133 Micromonas commoda HOM05D005176 ORTHO05D006482 5.0e-69 265.8 214 58.4
Pp3c27_6780 Physcomitrium patens HOM05D005176 ORTHO05D006482 2.3e-61 240.4 201 57.2
SMO147G0375 Selaginella moellendorffii HOM05D005176 ORTHO05D006482 5.0e-61 239.2 205 55.1
Mapoly0003s0157 Marchantia polymorpha HOM05D005176 ORTHO05D006482 4.7e-59 232.6 218 52.8
AagrBONN_evm.TU.Sc2ySwM_362.2521 Anthoceros agrestis HOM05D005176 ORTHO05D006482 6.1e-59 232.3 200 55.5
Cre07.g350750 Chlamydomonas reinhardtii HOM05D005176 ORTHO05D006482 8.0e-59 231.9 238 51.7
Cre03.g172500 Chlamydomonas reinhardtii HOM05D005176 ORTHO05D006482 2.0e-54 217.2 197 55.3
MCO02G403 Micromonas commoda HOM05D005176 ORTHO05D006482 7.3e-52 208.8 190 53.7
GSVIVG01007272001 Vitis vinifera HOM05D005176 ORTHO05D006482 4.7e-51 206.1 293 44.7
AUR62021889 Chenopodium quinoa HOM05D005176 ORTHO05D006482 1.2e-49 201.4 356 39.3
Duzib235G1273 Durio zibethinus HOM05D005176 ORTHO05D006482 1.9e-47 194.1 120 75.8
Hma1.2p1_0298F.1_g117340 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 1.1e-39 168.3 188 53.2
AagrBONN_evm.TU.Sc2ySwM_344.415 Anthoceros agrestis HOM05D005176 ORTHO05D006482 8.6e-37 158.7 98 75.5
PRCOL_00006497 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 1.9e-36 157.5 141 52.5
SEGI_26802 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 5.6e-36 156.0 106 67.0
HPP92_004744 Vanilla planifolia HOM05D005176 ORTHO05D006482 8.9e-34 148.7 100 70.0
SEGI_01990 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 6.6e-29 132.5 70 84.3
QL03p008204 Quercus lobata HOM05D005176 ORTHO05D006482 8.7e-29 132.1 111 59.5
A03p53390 Brassica napus HOM05D005176 ORTHO05D006482 6.0e-22 109.4 115 52.2
arahy.Tifrunner.gnm1.ann1.E0HWS1 Arachis hypogaea HOM05D005176 ORTHO05D038931 2.1e-19 100.9 123 48.0
BraA03t14406Z Brassica rapa HOM05D005176 ORTHO05D006482 2.6e-17 94.0 101 52.5
Eucgr.E03965 Eucalyptus grandis HOM05D005176 ORTHO05D006482 1.9e-15 87.8 50 74.0
CBR_g12323 Chara braunii HOM05D005176 ORTHO05D006482 5.4e-15 86.3 65 61.5
Os03g0847500 Oryza sativa ssp. japonica HOM05D005176 ORTHO05D038931 9.3e-15 85.5 120 45.0
Lj3g0010948 Lotus japonicus HOM05D005176 ORTHO05D006482 1.9e-12 77.8 37 86.5
CBR_g12320 Chara braunii HOM05D000019 ORTHO05D009492 1.6e-11 74.7 81 46.9
BolC7t45661H Brassica oleracea HOM05D005176 ORTHO05D006482 2.0e-09 67.8 74 52.7
PRCOL_00006496 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 1.2e-06 58.5 53 56.6


User provided reference genes

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