Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI63G1552 Tripterygium wilfordii HOM05D004744 ORTHO05D005655 5.2e-57 224.2 113 100.0
CAN.G326.4 Capsicum annuum HOM05D004744 ORTHO05D005655 6.4e-15 84.3 95 49.5
Cfa013106 Carpinus fangiana HOM05D004744 ORTHO05D005655 4.1e-14 81.6 88 55.7
Actinidia13213 Actinidia chinensis HOM05D004744 ORTHO05D005655 7.0e-14 80.9 94 48.9
PGSC0003DMG400015627 Solanum tuberosum HOM05D004744 ORTHO05D005655 3.5e-13 78.6 92 51.1
Sopen08g011940 Solanum pennellii HOM05D004744 ORTHO05D005655 4.6e-13 78.2 92 51.1
CiPaw.08G008500 Carya illinoinensis HOM05D004744 ORTHO05D005655 1.0e-12 77.0 93 51.6
RcHm_v2.0_Chr6g0297241 Rosa chinensis HOM05D004744 ORTHO05D005655 1.0e-12 77.0 92 47.8
CSS0007985 Camellia sinensis var. sinensis HOM05D004744 ORTHO05D005655 1.3e-12 76.6 94 48.9
Haze_21464 Corylus avellana HOM05D004744 ORTHO05D005655 1.3e-12 76.6 75 57.3
Gohir.D06G101900 Gossypium hirsutum HOM05D004744 ORTHO05D005655 1.3e-12 76.6 88 47.7
Gorai.010G116900 Gossypium raimondii HOM05D004744 ORTHO05D005655 1.3e-12 76.6 88 47.7
Nitab4.5_0002992g0040 Nicotiana tabacum HOM05D004744 ORTHO05D005655 1.3e-12 76.6 91 48.4
Solyc08g041780.3 Solanum lycopersicum HOM05D004744 ORTHO05D005655 1.7e-12 76.3 92 50.0
Prupe.1G485900 Prunus persica HOM05D004744 ORTHO05D005655 3.9e-12 75.1 92 46.7
Gohir.A06G099700 Gossypium hirsutum HOM05D004744 ORTHO05D005655 5.0e-12 74.7 87 48.3
Dinv18156 Davidia involucrata HOM05D004744 ORTHO05D005655 1.1e-11 73.6 88 47.7
Rhsim02G0205700 Rhododendron simsii HOM05D004744 ORTHO05D005655 1.1e-11 73.6 94 50.0
Thecc.09G019800 Theobroma cacao HOM05D004744 ORTHO05D005655 1.1e-11 73.6 89 44.9
FAN27G1080 Fragaria x ananassa HOM05D004744 ORTHO05D005655 1.9e-11 72.8 96 43.8
Peaxi162Scf00116g00915 Petunia axillaris HOM05D004744 ORTHO05D005655 1.9e-11 72.8 91 46.2
QL02p020429 Quercus lobata HOM05D004744 ORTHO05D005655 1.9e-11 72.8 88 50.0
FvH4_2g28330 Fragaria vesca HOM05D004744 ORTHO05D005655 2.5e-11 72.4 92 44.6
FAN20G1207 Fragaria x ananassa HOM05D004744 ORTHO05D005655 4.3e-11 71.6 92 43.5
Sabra18G0025200 Salix brachista HOM05D004744 ORTHO05D005655 5.6e-11 71.2 94 42.6
GSVIVG01035922001 Vitis vinifera HOM05D004744 ORTHO05D005655 5.6e-11 71.2 80 46.2
MELO3C016990.2 Cucumis melo HOM05D004744 ORTHO05D005655 7.3e-11 70.9 92 43.5
FAN24G2392 Fragaria x ananassa HOM05D004744 ORTHO05D005655 7.3e-11 70.9 92 43.5
COL.COLO4_18909 Corchorus olitorius HOM05D004744 ORTHO05D005655 1.2e-10 70.1 84 44.0
Cpa.g.sc187.23 Carica papaya HOM05D004744 ORTHO05D005655 2.1e-10 69.3 87 44.8
Potri.018G022800 Populus trichocarpa HOM05D004744 ORTHO05D005655 2.8e-10 68.9 94 41.5
MD15G1130500 Malus domestica HOM05D004744 ORTHO05D005655 3.6e-10 68.6 91 44.0
THA.LOC104805576 Tarenaya hassleriana HOM05D004744 ORTHO05D005655 3.6e-10 68.6 88 39.8
Manes.03G012200 Manihot esculenta HOM05D004744 ORTHO05D005655 8.1e-10 67.4 93 46.2
Nn8g39704 Nelumbo nucifera HOM05D004744 ORTHO05D005655 8.1e-10 67.4 93 46.2
PSO063G6514 Papaver somniferum HOM05D004744 ORTHO05D005655 1.1e-09 67.0 93 38.7
ClCG05G016620 Citrullus lanatus HOM05D004744 ORTHO05D005655 1.8e-09 66.2 92 41.3
TAR625G1411 Trochodendron aralioides HOM05D004744 ORTHO05D005655 1.8e-09 66.2 92 42.4
Atru.chr7.2497 Acer truncatum HOM05D004744 ORTHO05D005655 2.3e-09 65.9 75 50.7
CsaV3_4G036900 Cucumis sativus L. HOM05D004744 ORTHO05D005655 2.3e-09 65.9 88 42.0
TWI32G0623 Tripterygium wilfordii HOM05D004744 ORTHO05D005655 3.1e-09 65.5 48 70.8
Migut.A00009 Erythranthe guttata HOM05D004744 ORTHO05D005655 6.8e-09 64.3 94 41.5
CANSAT01G0649 Cannabis sativa HOM05D004744 ORTHO05D005655 8.9e-09 63.9 86 43.0
Oeu033353.1 Olea europaea HOM05D004744 ORTHO05D005655 1.2e-08 63.5 88 47.7
SGA_v2.0_scaffold64G21986 Striga asiatica HOM05D004744 ORTHO05D005655 1.2e-08 63.5 90 40.0
Lj8C731T12 Lonicera japonica HOM05D004744 ORTHO05D005655 1.5e-08 63.2 98 42.9
Eucgr.C01625 Eucalyptus grandis HOM05D004744 ORTHO05D005655 3.4e-08 62.0 75 42.7
Lalb_Chr08g0244261 Lupinus albus HOM05D004744 ORTHO05D005655 3.4e-08 62.0 92 41.3
Nitab4.5_0005958g0020 Nicotiana tabacum HOM05D004744 ORTHO05D005655 3.4e-08 62.0 73 46.6
Carub.0007s0850 Capsella rubella HOM05D004744 ORTHO05D005655 1.3e-07 60.1 75 41.3
Sc20g0001320 Simmondsia chinensis HOM05D004744 ORTHO05D005655 1.3e-07 60.1 88 42.0
TPR.G21273 Trifolium pratense HOM05D004744 ORTHO05D005655 1.7e-07 59.7 91 37.4
Sed0024238 Sechium edule HOM05D004744 ORTHO05D005655 3.7e-07 58.5 82 41.5
TPR.G21279 Trifolium pratense HOM05D004744 ORTHO05D005655 3.7e-07 58.5 91 36.3
Ca_15759_v3 Cicer arietinum L. HOM05D004744 ORTHO05D005655 8.3e-07 57.4 91 38.5
MSTRG.11596 Avicennia marina HOM05D004744 ORTHO05D005655 1.1e-06 57.0 87 41.4
Ciclev10007726m.g Citrus clementina HOM05D004744 ORTHO05D005655 1.1e-06 57.0 93 37.6
Eucgr.C01702 Eucalyptus grandis HOM05D004744 ORTHO05D005655 1.4e-06 56.6 75 38.7
Lj1g0018058 Lotus japonicus HOM05D004744 ORTHO05D005655 1.4e-06 56.6 78 39.7
Phvul.007G279700 Phaseolus vulgaris HOM05D004744 ORTHO05D005655 1.4e-06 56.6 91 39.6
Psat5g030800 Pisum sativum HOM05D004744 ORTHO05D005655 1.4e-06 56.6 91 38.5
TPR.G3127 Trifolium pratense HOM05D004744 ORTHO05D005655 1.4e-06 56.6 73 42.5
ECA248G1191 Erigeron canadensis HOM05D004744 ORTHO05D005655 1.9e-06 56.2 94 40.4
Aqoxy7G03541 Aquilegia oxysepala HOM05D004744 ORTHO05D005655 2.4e-06 55.8 92 37.0
BcaC06g30944 Brassica carinata HOM05D004744 ORTHO05D005655 4.1e-06 55.1 76 40.8
BcaNung03134 Brassica carinata HOM05D004744 ORTHO05D005655 4.1e-06 55.1 75 42.7
Thhalv10024640m.g Eutrema salsugineum HOM05D004744 ORTHO05D005655 4.1e-06 55.1 85 40.0
ATR0767G197 Amborella trichopoda HOM05D004744 ORTHO05D005655 5.4e-06 54.7 89 41.6
A01p06240 Brassica napus HOM05D004744 ORTHO05D005655 5.4e-06 54.7 83 41.0
A06p40720 Brassica napus HOM05D004744 ORTHO05D005655 5.4e-06 54.7 74 41.9
BraA01t00591Z Brassica rapa HOM05D004744 ORTHO05D005655 5.4e-06 54.7 83 41.0
BraA06t26993Z Brassica rapa HOM05D004744 ORTHO05D005655 5.4e-06 54.7 74 41.9
CARHR239950 Cardamine hirsuta HOM05D004744 ORTHO05D005655 5.4e-06 54.7 75 40.0
Lsat_1_v5_gn_1_43821 Lactuca sativa HOM05D004744 ORTHO05D005655 5.4e-06 54.7 94 39.4
CDE05G1537 Ceratophyllum demersum HOM05D004744 ORTHO05D005655 7.1e-06 54.3 75 40.0


User provided reference genes

Program Settings