Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI63G1476 Tripterygium wilfordii HOM05D004932 ORTHO05D005622 2.8e-166 588.6 305 100.0
Duzib150G0148 Durio zibethinus HOM05D004932 ORTHO05D005622 1.6e-113 413.3 306 69.6
Duzib168G1170 Durio zibethinus HOM05D004932 ORTHO05D005622 2.1e-113 412.9 306 69.6
PGR142G3354 Punica granatum HOM05D004932 ORTHO05D005622 2.1e-113 412.9 307 70.7
Gohir.D07G010400 Gossypium hirsutum HOM05D004932 ORTHO05D005622 4.4e-111 405.2 285 74.7
Gorai.001G010800 Gossypium raimondii HOM05D004932 ORTHO05D005622 4.4e-111 405.2 285 74.7
Gohir.A07G010100 Gossypium hirsutum HOM05D004932 ORTHO05D005622 1.7e-110 403.3 304 70.7
Eucgr.C00917 Eucalyptus grandis HOM05D004932 ORTHO05D005622 2.2e-110 402.9 297 70.0
Manes.14G155500 Manihot esculenta HOM05D004932 ORTHO05D005622 3.2e-109 399.1 308 66.9
Atru.chr7.1544 Acer truncatum HOM05D004932 ORTHO05D005622 4.6e-108 395.2 308 67.9
Actinidia29889 Actinidia chinensis HOM05D004932 ORTHO05D005622 7.8e-108 394.4 307 68.1
Thecc.09G093000 Theobroma cacao HOM05D004932 ORTHO05D005622 7.8e-108 394.4 302 67.9
Lj2g0005770 Lotus japonicus HOM05D004932 ORTHO05D005622 1.9e-106 389.8 303 66.7
Dinv36742 Davidia involucrata HOM05D004932 ORTHO05D005622 3.3e-106 389.0 306 65.7
CANSAT56G0365 Cannabis sativa HOM05D004932 ORTHO05D005622 4.7e-105 385.2 306 67.0
Dinv42295 Davidia involucrata HOM05D004932 ORTHO05D005622 1.0e-104 384.0 306 62.7
Medtr6g091780 Medicago truncatula HOM05D004932 ORTHO05D005622 1.4e-104 383.6 299 66.9
Lalb_Chr24g0393881 Lupinus albus HOM05D004932 ORTHO05D005622 4.0e-104 382.1 303 67.3
Manes.16G104000 Manihot esculenta HOM05D004932 ORTHO05D005622 2.6e-103 379.4 308 64.3
MD15G1203900 Malus domestica HOM05D004932 ORTHO05D005622 3.4e-103 379.0 307 64.5
Nn6g35421 Nelumbo nucifera HOM05D004932 ORTHO05D005622 5.8e-103 378.3 307 65.1
Hma1.2p1_0798F.1_g219580 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 7.5e-103 377.9 306 63.4
Glyma.07G128200 Glycine max HOM05D004932 ORTHO05D005622 1.7e-102 376.7 303 66.0
Ca_25616_v3 Cicer arietinum L. HOM05D004932 ORTHO05D005622 2.9e-102 375.9 300 64.3
FAN26G1352 Fragaria x ananassa HOM05D004932 ORTHO05D005622 3.7e-102 375.6 306 64.1
FAN26G3436 Fragaria x ananassa HOM05D004932 ORTHO05D005622 3.7e-102 375.6 306 64.1
FAN19G2121 Fragaria x ananassa HOM05D004932 ORTHO05D005622 8.3e-102 374.4 306 64.1
FAN28G1050 Fragaria x ananassa HOM05D004932 ORTHO05D005622 8.3e-102 374.4 306 64.4
FvH4_1g07000 Fragaria vesca HOM05D004932 ORTHO05D005622 1.9e-101 373.2 306 61.4
FAN23G2709 Fragaria x ananassa HOM05D004932 ORTHO05D005622 1.9e-101 373.2 306 64.1
Nitab4.5_0007297g0010 Nicotiana tabacum HOM05D004932 ORTHO05D005622 4.1e-101 372.1 303 64.4
CiPaw.03G218800 Carya illinoinensis HOM05D004932 ORTHO05D005622 5.4e-101 371.7 305 64.3
Potri.018G067300 Populus trichocarpa HOM05D004932 ORTHO05D005622 1.2e-100 370.5 308 64.0
PGSC0003DMG400008434 Solanum tuberosum HOM05D004932 ORTHO05D005622 1.2e-100 370.5 300 64.7
Haze_25884 Corylus avellana HOM05D004932 ORTHO05D005622 2.0e-100 369.8 306 63.7
Nitab4.5_0000713g0230 Nicotiana tabacum HOM05D004932 ORTHO05D005622 2.0e-100 369.8 305 63.9
COL.COLO4_18228 Corchorus olitorius HOM05D004932 ORTHO05D005622 7.8e-100 367.9 302 64.9
Cc06_g11080 Coffea canephora HOM05D004932 ORTHO05D005622 1.0e-99 367.5 307 63.5
EL10Ac8g19275 Beta vulgaris HOM05D004932 ORTHO05D005622 2.3e-99 366.3 311 61.7
GSVIVG01015235001 Vitis vinifera HOM05D004932 ORTHO05D005622 3.0e-99 365.9 302 63.9
MELO3C015448.2 Cucumis melo HOM05D004932 ORTHO05D005622 3.9e-99 365.5 302 65.6
Sabra18G0059800 Salix brachista HOM05D004932 ORTHO05D005622 5.0e-99 365.2 308 63.6
CAN.G1837.4 Capsicum annuum HOM05D004932 ORTHO05D005622 8.6e-99 364.4 296 63.2
MSTRG.10579 Avicennia marina HOM05D004932 ORTHO05D005622 1.1e-98 364.0 308 62.0
Lj7C672T15 Lonicera japonica HOM05D004932 ORTHO05D005622 1.1e-98 364.0 296 64.9
arahy.Tifrunner.gnm1.ann1.NAI4LE Arachis hypogaea HOM05D004932 ORTHO05D005622 4.3e-98 362.1 308 61.7
arahy.Tifrunner.gnm1.ann1.RRYY0T Arachis hypogaea HOM05D004932 ORTHO05D005622 4.3e-98 362.1 306 62.4
SalBow1G2721 Salvia bowleyana HOM05D004932 ORTHO05D005622 5.6e-98 361.7 300 61.0
CsaV3_1G040210 Cucumis sativus L. HOM05D004932 ORTHO05D005622 7.3e-98 361.3 299 65.6
CsaV3_UNG060480 Cucumis sativus L. HOM05D004932 ORTHO05D005622 7.3e-98 361.3 299 65.6
Sopen07g015910 Solanum pennellii HOM05D004932 ORTHO05D005622 1.2e-97 360.5 300 64.0
THA.LOC104814605 Tarenaya hassleriana HOM05D004932 ORTHO05D005622 1.2e-97 360.5 291 63.2
QL02p063162 Quercus lobata HOM05D004932 ORTHO05D005622 1.6e-97 360.1 305 63.0
Aqoxy7G01262 Aquilegia oxysepala HOM05D004932 ORTHO05D005622 6.2e-97 358.2 297 62.6
Solyc07g032250.4 Solanum lycopersicum HOM05D004932 ORTHO05D005622 4.0e-96 355.5 300 63.3
A01p08520 Brassica napus HOM05D004932 ORTHO05D005622 5.2e-96 355.1 313 59.4
MD02G1074400 Malus domestica HOM05D004932 ORTHO05D005622 8.9e-96 354.4 306 61.4
BolC3t21234H Brassica oleracea HOM05D004932 ORTHO05D005622 1.3e-94 350.5 303 62.0
A08p19620 Brassica napus HOM05D004932 ORTHO05D005622 1.7e-94 350.1 302 62.6
CSS0009775 Camellia sinensis var. sinensis HOM05D004932 ORTHO05D005622 1.7e-94 350.1 306 62.1
Medtr6g090810 Medicago truncatula HOM05D004932 ORTHO05D005622 1.7e-94 350.1 299 63.2
C03p89240 Brassica napus HOM05D004932 ORTHO05D005622 2.2e-94 349.7 303 62.0
BcaC01g01175 Brassica carinata HOM05D004932 ORTHO05D005622 3.7e-94 349.0 303 61.4
Lalb_Chr14g0375311 Lupinus albus HOM05D004932 ORTHO05D005622 6.4e-94 348.2 302 59.6
TPR.G35493 Trifolium pratense HOM05D004932 ORTHO05D005622 6.4e-94 348.2 305 63.0
AL7G22880 Arabidopsis lyrata HOM05D004932 ORTHO05D005622 8.3e-94 347.8 302 62.3
BraA08t33920Z Brassica rapa HOM05D004932 ORTHO05D005622 8.3e-94 347.8 302 62.3
Carub.0007s1103 Capsella rubella HOM05D004932 ORTHO05D005622 8.3e-94 347.8 303 62.4
Thhalv10025804m.g Eutrema salsugineum HOM05D004932 ORTHO05D005622 1.1e-93 347.4 306 59.2
BraA01t00801Z Brassica rapa HOM05D004932 ORTHO05D005622 1.9e-93 346.7 314 58.0
BcaC09g51740 Brassica carinata HOM05D004932 ORTHO05D005622 5.4e-93 345.1 305 61.0
C01p09950 Brassica napus HOM05D004932 ORTHO05D005622 9.2e-93 344.4 311 60.1
BolC1t00957H Brassica oleracea HOM05D004932 ORTHO05D005622 9.2e-93 344.4 311 60.1
Glyma.01G003700 Glycine max HOM05D004932 ORTHO05D005622 1.2e-92 344.0 304 61.5
AT4G29520 Arabidopsis thaliana HOM05D004932 ORTHO05D005622 2.1e-92 343.2 302 61.9
VMungo0464G1844 Vigna mungo HOM05D004932 ORTHO05D005622 2.7e-92 342.8 297 62.0
ATR0789G094 Amborella trichopoda HOM05D004932 ORTHO05D005622 1.0e-91 340.9 292 57.9
Ciclev10009015m.g Citrus clementina HOM05D004932 ORTHO05D005622 8.6e-91 337.8 302 61.3
Phvul.004G172100 Phaseolus vulgaris HOM05D004932 ORTHO05D005622 1.1e-90 337.4 303 60.7
Cpa.g.sc7.248 Carica papaya HOM05D004932 ORTHO05D005622 1.9e-90 336.7 306 61.1
Prupe.7G213500 Prunus persica HOM05D004932 ORTHO05D005622 9.5e-90 334.3 306 60.8
Medtr6g092180 Medicago truncatula HOM05D004932 ORTHO05D005622 2.1e-89 333.2 299 61.2
Sc18g0001850 Simmondsia chinensis HOM05D004932 ORTHO05D005622 2.8e-89 332.8 266 66.9
vmacro06275 Vaccinium macrocarpon HOM05D004932 ORTHO05D005622 3.6e-89 332.4 306 59.2
PSO210G2479 Papaver somniferum HOM05D004932 ORTHO05D005622 4.7e-89 332.0 290 60.7
ClCG03G015800 Citrullus lanatus HOM05D004932 ORTHO05D005622 1.1e-88 330.9 302 60.6
Sp7g27380 Schrenkiella parvula HOM05D004932 ORTHO05D005622 3.1e-88 329.3 307 58.6
arahy.Tifrunner.gnm1.ann1.XF40UC Arachis hypogaea HOM05D004932 ORTHO05D005622 6.8e-88 328.2 305 60.7
BcaB03g12610 Brassica carinata HOM05D004932 ORTHO05D005622 1.2e-87 327.4 309 58.9
Psat1g049760 Pisum sativum HOM05D004932 ORTHO05D005622 1.5e-87 327.0 297 61.6
arahy.Tifrunner.gnm1.ann1.E8KE86 Arachis hypogaea HOM05D004932 ORTHO05D005622 2.6e-87 326.2 307 59.6
CARHR237350 Cardamine hirsuta HOM05D004932 ORTHO05D005622 2.6e-87 326.2 305 58.7
PSO210G4737 Papaver somniferum HOM05D004932 ORTHO05D005622 4.4e-87 325.5 299 60.2
CDE05G0556 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 1.3e-86 323.9 299 60.2
RcHm_v2.0_Chr2g0092951 Rosa chinensis HOM05D004932 ORTHO05D005622 2.9e-86 322.8 308 58.4
Sed0008469 Sechium edule HOM05D004932 ORTHO05D005622 2.9e-86 322.8 222 70.3
ECA234G2984 Erigeron canadensis HOM05D004932 ORTHO05D005622 2.4e-85 319.7 274 59.1
Lsat_1_v5_gn_5_145840 Lactuca sativa HOM05D004932 ORTHO05D005622 1.0e-83 314.3 299 58.9
AUR62027447 Chenopodium quinoa HOM05D004932 ORTHO05D005622 3.9e-83 312.4 306 52.3
Os06g0150400 Oryza sativa ssp. japonica HOM05D004932 ORTHO05D005622 5.1e-83 312.0 280 60.0
unitig_749.g14227 Utricularia gibba HOM05D004932 ORTHO05D005622 5.1e-83 312.0 291 57.4
AUR62031253 Chenopodium quinoa HOM05D004932 ORTHO05D005622 8.6e-83 311.2 306 51.3
Oeu000325.1 Olea europaea HOM05D001440 ORTHO05D005622 1.5e-82 310.5 247 66.4
Rhsim03G0234400 Rhododendron simsii HOM05D004932 ORTHO05D005622 4.3e-82 308.9 309 57.9
Peaxi162Scf00444g00617 Petunia axillaris HOM05D004932 ORTHO05D005622 1.2e-81 307.4 302 54.0
Migut.K00580 Erythranthe guttata HOM05D004932 ORTHO05D005622 2.1e-81 306.6 310 55.8
HanXRQChr10g0319131 Helianthus annuus HOM05D004932 ORTHO05D005622 4.7e-81 305.4 297 56.9
Ah.09g228480 Amaranthus hybridus HOM05D004932 ORTHO05D005622 6.2e-81 305.1 300 52.0
SGA_v2.0_scaffold10G05207 Striga asiatica HOM05D004932 ORTHO05D005622 8.1e-81 304.7 353 51.6
Aa31LG2G20960 Aethionema arabicum HOM05D004932 ORTHO05D005622 1.4e-80 303.9 306 56.5
Zm00001eb376850 Zea mays HOM05D004932 ORTHO05D005622 2.4e-80 303.1 306 55.2
CDE05G1139 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 4.4e-79 298.9 254 61.8
DCAR_011989 Daucus carota HOM05D004932 ORTHO05D005622 9.9e-79 297.7 265 63.0
TAR365G0154 Trochodendron aralioides HOM05D004932 ORTHO05D005622 1.4e-77 293.9 238 62.2
SEGI_24488 Sequoiadendron giganteum HOM05D004932 ORTHO05D005622 2.4e-77 293.1 308 51.3
HPP92_004560 Vanilla planifolia HOM05D004932 ORTHO05D005622 3.5e-76 289.3 308 51.6
Medtr6g092150 Medicago truncatula HOM05D004932 ORTHO05D005622 1.4e-72 277.3 306 51.3
Cfa003116 Carpinus fangiana HOM05D004932 ORTHO05D005622 6.4e-70 268.5 229 63.3
Mapoly0075s0048 Marchantia polymorpha HOM05D004932 ORTHO05D005622 4.6e-68 262.3 313 50.8
unitig_78.g29619 Utricularia gibba HOM05D004932 ORTHO05D005622 1.3e-67 260.8 277 52.3
HanXRQChr12g0355371 Helianthus annuus HOM05D004932 ORTHO05D005622 7.1e-61 238.4 295 49.8
SHI02816 Sapria himalayana HOM05D004932 ORTHO05D005622 1.2e-60 237.7 233 53.2
Pp3c4_19450 Physcomitrium patens HOM05D004932 ORTHO05D005622 2.3e-59 233.4 286 45.8
arahy.Tifrunner.gnm1.ann1.GR1INA Arachis hypogaea HOM05D004932 ORTHO05D005622 9.3e-53 211.5 185 59.5
AagrBONN_evm.TU.Sc2ySwM_362.2022 Anthoceros agrestis HOM05D004932 ORTHO05D005622 3.0e-51 206.5 209 53.1
SMO361G0136 Selaginella moellendorffii HOM05D004932 ORTHO05D005622 9.7e-50 201.4 223 47.5
Cc06_g18040 Coffea canephora HOM05D004932 ORTHO05D005622 9.3e-45 184.9 202 49.5
CBR_g8029 Chara braunii HOM05D004932 ORTHO05D005622 4.6e-44 182.6 249 42.2
Oeu037599.1 Olea europaea HOM05D004932 ORTHO05D005622 3.0e-35 153.3 277 40.1
unitig_26.g9168 Utricularia gibba HOM05D004932 ORTHO05D005622 1.7e-33 147.5 130 57.7
arahy.Tifrunner.gnm1.ann1.Y4MEFZ Arachis hypogaea HOM05D004932 ORTHO05D005622 2.4e-32 143.7 98 71.4
MCO04G519 Micromonas commoda HOM05D004932 ORTHO05D005622 8.0e-28 128.6 205 36.6
Hma1.2p1_0798F.1_g219570 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 6.7e-27 125.6 134 54.5
Hma1.2p1_1074F.1_g254276 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 6.7e-27 125.6 134 54.5
PRCOL_00005979 Prasinoderma coloniale HOM05D004932 ORTHO05D005622 2.0e-26 124.0 198 32.8
Cre03.g151700 Chlamydomonas reinhardtii HOM05D004932 ORTHO05D005622 9.1e-24 115.2 201 34.3
Hma1.2p1_1586F.1_g292210 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 4.7e-20 102.8 66 69.7
arahy.Tifrunner.gnm1.ann1.XYZ5FS Arachis hypogaea HOM05D004932 ORTHO05D005622 1.8e-19 100.9 68 66.2
RcHm_v2.0_Chr5g0016971 Rosa chinensis HOM05D004932 ORTHO05D005622 5.7e-18 95.9 64 71.9
Oeu037598.1 Olea europaea HOM05D004932 ORTHO05D005622 2.2e-17 94.0 95 61.1
RcHm_v2.0_Chr4g0402141 Rosa chinensis HOM05D004932 ORTHO05D005622 2.8e-17 93.6 62 72.6
Hma1.2p1_1881F.1_g306380 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 4.5e-15 86.3 52 75.0
CiPaw.05G072200 Carya illinoinensis HOM05D004932 ORTHO05D005622 1.2e-12 78.2 49 73.5
CARHR109770 Cardamine hirsuta HOM05D004932 ORTHO05D005622 1.6e-12 77.8 119 42.9
unitig_26.g9167 Utricularia gibba HOM05D004932 ORTHO05D005622 2.6e-10 70.5 116 44.8
Nn3g21874 Nelumbo nucifera HOM05D004932 ORTHO05D005622 5.7e-10 69.3 45 66.7
Nn2g13205 Nelumbo nucifera HOM05D004932 ORTHO05D005622 7.5e-10 68.9 50 62.0
TAR636G2165 Trochodendron aralioides HOM05D004932 ORTHO05D005622 1.7e-09 67.8 53 54.7
Medtr6g077350 Medicago truncatula HOM05D004932 ORTHO05D005622 4.8e-09 66.2 43 74.4
Medtr6g091840 Medicago truncatula HOM05D004932 ORTHO05D005622 5.4e-08 62.8 127 36.2
arahy.Tifrunner.gnm1.ann1.P1T2M1 Arachis hypogaea HOM05D000368 ORTHO05D000289 7.7e-07 58.9 39 66.7


User provided reference genes

Program Settings