Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 7.6e-178 627.1 327 100.0
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 1.7e-124 449.9 327 73.4
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.3e-121 440.3 327 72.8
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.6e-119 433.3 327 72.8
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.8e-119 432.6 314 72.9
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 4.7e-119 431.8 331 71.0
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 5.2e-118 428.3 328 70.4
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 7.5e-117 424.5 331 70.7
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 7.5e-117 424.5 319 72.4
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 9.8e-117 424.1 330 70.0
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 4.9e-116 421.8 329 72.9
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 8.3e-116 421.0 327 69.7
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 1.4e-115 420.2 325 69.5
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 2.0e-114 416.4 331 70.1
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 7.8e-114 414.5 328 69.5
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.7e-113 413.3 329 69.3
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 3.0e-113 412.5 331 67.1
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 3.0e-113 412.5 339 67.3
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 4.3e-112 408.7 332 66.3
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 7.3e-112 407.9 328 69.5
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 9.5e-112 407.5 325 68.3
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 1.6e-111 406.8 335 66.3
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.6e-111 406.8 330 67.3
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 2.1e-111 406.4 327 67.0
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.8e-111 406.0 331 67.4
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 2.8e-111 406.0 328 67.4
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 4.7e-111 405.2 330 67.6
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 4.7e-111 405.2 331 66.8
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.4e-110 403.7 330 66.7
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 2.3e-110 402.9 330 66.4
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 4.0e-110 402.1 328 69.2
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 8.9e-110 401.0 327 67.0
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 2.6e-109 399.4 327 66.7
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.4e-109 399.1 327 66.7
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 5.8e-109 398.3 294 71.4
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 9.8e-109 397.5 327 65.1
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 9.8e-109 397.5 290 74.1
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.1e-107 394.0 304 72.0
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.4e-107 393.7 328 64.6
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 9.2e-107 391.0 259 77.6
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 1.2e-106 390.6 325 64.3
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.6e-106 390.2 332 63.9
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.6e-106 390.2 295 71.5
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 2.1e-106 389.8 326 64.4
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 3.5e-106 389.0 326 63.2
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 6.0e-106 388.3 353 61.8
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 7.8e-106 387.9 327 65.1
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.3e-105 386.3 325 66.2
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 3.0e-105 386.0 327 64.2
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 5.1e-105 385.2 327 63.9
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 6.6e-105 384.8 352 61.4
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 8.6e-105 384.4 264 76.1
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 8.6e-105 384.4 331 66.8
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.1e-104 384.0 261 75.9
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.1e-104 384.0 327 63.9
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.5e-104 383.6 272 74.3
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.9e-104 383.3 328 64.3
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 2.5e-104 382.9 291 70.4
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.5e-104 382.9 326 64.4
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 5.6e-104 381.7 325 65.5
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 5.6e-104 381.7 330 65.5
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 2.8e-103 379.4 294 69.4
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 4.7e-103 378.6 250 78.8
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 4.7e-103 378.6 323 63.2
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 8.1e-103 377.9 322 64.6
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.8e-102 376.7 262 74.8
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 4.0e-102 375.6 329 63.2
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 5.2e-102 375.2 324 63.3
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 1.5e-101 373.6 350 63.4
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 1.5e-101 373.6 325 62.5
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 2.6e-101 372.9 345 62.0
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 4.4e-101 372.1 249 77.5
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 7.5e-101 371.3 337 61.7
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.3e-100 370.5 332 63.3
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 2.2e-100 369.8 261 73.9
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.9e-99 366.7 333 61.9
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 9.2e-99 364.4 372 58.3
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 1.2e-98 364.0 333 61.3
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 2.1e-98 363.2 235 80.0
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 5.1e-97 358.6 304 63.8
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 6.6e-97 358.2 354 58.2
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.9e-96 356.7 238 76.1
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 7.3e-96 354.8 331 60.4
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 8.1e-95 351.3 250 71.6
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 8.9e-94 347.8 263 65.8
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 4.4e-93 345.5 272 65.1
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.4e-91 340.5 250 71.2
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 9.3e-91 337.8 292 62.7
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.1e-89 332.0 329 58.1
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 3.3e-88 329.3 251 70.9
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 4.0e-86 322.4 221 72.9
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 2.9e-84 316.2 235 67.7
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 7.3e-80 301.6 265 62.3
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 1.3e-79 300.8 222 66.7
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.8e-79 299.7 327 55.7
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.4e-78 297.4 255 64.7
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 3.9e-73 279.3 266 54.1
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 6.7e-73 278.5 222 68.0
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 4.3e-72 275.8 266 60.9
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.1e-70 271.2 187 75.4
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 2.6e-69 266.5 260 53.5
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 4.5e-69 265.8 195 70.8
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 1.3e-65 254.2 260 50.8
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.2e-60 236.9 266 47.4
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.1e-59 231.9 253 48.6
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.5e-58 229.6 251 48.2
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 3.0e-57 226.5 275 45.5
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.5e-56 223.4 249 51.4
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.4e-54 217.6 129 86.0
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 5.3e-46 189.1 250 40.8
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 5.0e-44 182.6 162 63.6
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 9.7e-40 168.3 249 41.8
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 2.2e-39 167.2 123 72.4
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 2.7e-34 150.2 246 35.8
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 5.7e-24 115.9 244 30.3
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 5.4e-22 109.4 319 33.5
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 7.0e-22 109.0 236 32.6
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 2.4e-06 57.4 32 87.5


User provided reference genes

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