Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI63G0953 Tripterygium wilfordii HOM05D000023 ORTHO05D017150 1.3e-61 239.6 126 100.0
TWI75G1282 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.5e-60 235.3 124 99.2
TWI36G0110 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.3e-53 213.0 124 91.1
TWI63G0895 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.6e-51 206.1 124 87.9
TWI18G0682 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 9.2e-47 190.3 112 90.2
TWI32G1076 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.5e-36 155.6 114 74.6
Rhsim09G0063600 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.2e-22 110.2 116 56.0
Rhsim03G0092200 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.0e-22 107.8 104 58.7
Rhsim13G0106300 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.8e-22 107.5 104 58.7
Rhsim05G0190500 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.1e-21 104.8 96 59.4
Rhsim01G0206800 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.6e-20 101.3 104 56.7
Rhsim02G0154200 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.3e-20 100.9 105 57.1
TWI18G0660 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.4e-18 96.7 53 84.9
Rhsim10G0121900 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.0e-18 95.1 87 58.6
Rhsim02G0125000 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.9e-18 94.4 98 52.0
Rhsim01G0126200 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.0e-17 92.8 101 53.5
Rhsim05G0095900 Rhododendron simsii HOM05D009624 ORTHO05D017150 2.0e-17 92.8 113 51.3
Rhsim08G0134200 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.0e-17 92.8 113 51.3
Rhsim05G0091000 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.6e-17 90.9 79 58.2
Rhsim06G0097600 Rhododendron simsii HOM05D009624 ORTHO05D017150 4.9e-16 88.2 113 50.4
Rhsim05G0095700 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.2e-14 83.6 111 49.5
RcHm_v2.0_Chr1g0314451 Rosa chinensis HOM05D000023 ORTHO05D000014 1.6e-14 83.2 109 47.7
Rhsim01G0132500 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.9e-14 80.9 74 58.1
Rhsim07G0175200 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.9e-14 80.9 109 49.5
Rhsim09G0032000 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.1e-12 77.0 75 54.7
Hma1.2p1_0246F.1_g101770 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-12 76.6 76 51.3
FvH4_5g39742 Fragaria vesca HOM05D000023 ORTHO05D000014 2.5e-12 75.9 110 47.3
Hma1.2p1_0352F.1_g133020 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.6e-12 74.7 76 50.0
Atru.chr6.523 Acer truncatum HOM05D000023 ORTHO05D000014 4.0e-10 68.6 99 43.4
Hma1.2p1_0545F.1_g175990 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 9.0e-10 67.4 76 46.1
Rhsim01G0081000 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.5e-09 66.6 89 47.2
Zm00001eb431660 Zea mays HOM05D000023 ORTHO05D000014 1.5e-09 66.6 116 41.4
Atru.chr8.33 Acer truncatum HOM05D000023 ORTHO05D000014 2.0e-09 66.2 98 40.8
Zm00001eb288030 Zea mays HOM05D000023 ORTHO05D000014 2.0e-09 66.2 134 38.8
Rhsim06G0134600 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.8e-09 64.7 86 46.5
TWI77G0940 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 6.4e-08 61.2 35 82.9
RhsimUnG0157100 Rhododendron simsii HOM05D000023 ORTHO05D017150 2.4e-07 59.3 48 60.4
RcHm_v2.0_Chr5g0003001 Rosa chinensis HOM05D009624 ORTHO05D017150 2.4e-07 59.3 84 45.2
Hma1.2p1_1053F.1_g252400 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.2e-07 58.9 58 53.4
RcHm_v2.0_Chr4g0430831 Rosa chinensis HOM05D009624 ORTHO05D017150 9.3e-07 57.4 84 45.2
FvH4_6g28272 Fragaria vesca HOM05D000023 ORTHO05D000014 2.1e-06 56.2 77 42.9
Zm00001eb072540 Zea mays HOM05D000023 ORTHO05D017150 6.0e-06 54.7 108 38.0


User provided reference genes

Program Settings