Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 1.2e-80 303.1 155 100.0
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 1.3e-55 219.9 159 70.4
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 6.6e-55 217.6 155 70.3
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 5.6e-54 214.5 158 67.7
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.6e-53 213.0 157 69.4
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 1.4e-52 209.9 160 66.2
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 4.0e-52 208.4 155 71.6
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 4.0e-52 208.4 155 65.2
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 5.2e-52 208.0 151 67.5
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 2.6e-51 205.7 149 67.8
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 3.4e-51 205.3 149 69.8
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 5.8e-51 204.5 151 67.5
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 7.6e-51 204.1 152 67.8
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 1.3e-50 203.4 153 66.0
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 1.3e-50 203.4 149 67.8
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 1.7e-50 203.0 151 66.2
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 2.9e-50 202.2 159 66.0
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 3.8e-50 201.8 149 68.5
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 6.4e-50 201.1 151 66.9
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 6.4e-50 201.1 154 66.9
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 6.4e-50 201.1 155 67.1
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.9e-49 199.5 149 67.1
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.9e-49 199.5 155 63.2
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 3.2e-49 198.7 155 68.4
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 4.2e-49 198.4 165 61.2
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 1.6e-48 196.4 156 64.7
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 2.1e-48 196.1 173 60.7
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 4.6e-48 194.9 148 64.2
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 7.8e-48 194.1 155 65.8
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 1.7e-47 193.0 159 62.9
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 2.3e-47 192.6 159 62.3
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 3.0e-47 192.2 149 63.1
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 6.6e-47 191.0 159 62.3
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 6.6e-47 191.0 159 61.6
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 8.7e-47 190.7 155 60.6
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 8.7e-47 190.7 159 61.0
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.1e-46 190.3 159 61.6
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.5e-46 189.9 152 63.2
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 2.5e-46 189.1 155 60.0
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 1.3e-45 186.8 149 64.4
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 2.1e-45 186.0 155 61.3
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 2.8e-45 185.7 153 56.2
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 2.8e-45 185.7 158 62.0
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 2.8e-45 185.7 155 61.3
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 3.6e-45 185.3 153 60.1
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 3.6e-45 185.3 153 60.1
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 3.6e-45 185.3 153 60.1
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 3.6e-45 185.3 190 55.3
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 3.6e-45 185.3 151 59.6
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 6.2e-45 184.5 156 59.6
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 6.2e-45 184.5 152 59.9
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 6.2e-45 184.5 151 61.6
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 1.4e-44 183.3 159 58.5
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 1.8e-44 183.0 152 59.9
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.8e-44 183.0 164 60.4
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 1.8e-44 183.0 183 55.7
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 3.1e-44 182.2 152 59.9
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 4.0e-44 181.8 153 58.2
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 4.0e-44 181.8 149 62.4
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 4.0e-44 181.8 159 59.1
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 4.0e-44 181.8 147 59.9
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 6.9e-44 181.0 152 60.5
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.2e-43 180.3 149 61.1
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 1.2e-43 180.3 151 62.9
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 1.2e-43 180.3 135 68.1
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 2.6e-43 179.1 123 69.9
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 4.4e-43 178.3 181 51.9
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 5.8e-43 177.9 156 58.3
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 7.6e-43 177.6 155 59.4
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 7.6e-43 177.6 149 60.4
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 9.9e-43 177.2 129 68.2
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 6.4e-42 174.5 155 58.1
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 6.4e-42 174.5 150 58.7
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 1.1e-41 173.7 128 64.8
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 1.4e-41 173.3 148 60.8
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 1.9e-41 172.9 153 58.2
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 2.4e-41 172.6 125 68.8
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 3.2e-41 172.2 162 53.7
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 5.4e-41 171.4 149 57.7
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 4.6e-40 168.3 147 58.5
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 4.6e-40 168.3 147 58.5
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 7.8e-40 167.5 121 67.8
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.0e-39 167.2 135 64.4
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 5.1e-39 164.9 146 54.8
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 8.7e-39 164.1 136 58.8
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.1e-38 163.7 173 50.3
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 9.6e-38 160.6 126 61.1
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 3.6e-37 158.7 125 65.6
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 2.9e-34 149.1 113 63.7
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 6.4e-34 147.9 113 62.8
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 8.4e-34 147.5 124 61.3
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 3.2e-33 145.6 111 66.7
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 5.4e-33 144.8 115 61.7
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.7e-32 142.5 157 51.0
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.3e-31 140.2 109 62.4
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 1.3e-29 133.7 116 58.6
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 6.2e-29 131.3 159 48.4
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 2.5e-25 119.4 134 44.0
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 9.3e-25 117.5 88 62.5
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.2e-24 117.1 150 40.7
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 4.6e-24 115.2 127 43.3
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 4.6e-24 115.2 145 40.0
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 5.1e-23 111.7 116 48.3
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.6e-21 106.7 72 69.4
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 2.8e-21 105.9 79 65.8
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 8.2e-21 104.4 73 67.1
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 8.2e-21 104.4 80 63.8
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.8e-20 103.2 71 70.4
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 3.4e-19 99.0 142 35.9
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 5.8e-19 98.2 88 60.2
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 2.9e-18 95.9 70 68.6
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 1.5e-14 83.6 82 53.7
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 3.7e-13 79.0 97 44.3
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.4e-12 77.0 57 70.2
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 5.0e-10 68.6 57 64.9
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 3.3e-06 55.8 69 43.5


User provided reference genes

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