Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.9e-81 305.8 159 100.0
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 4.0e-71 271.6 161 88.8
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 1.2e-40 170.2 155 60.6
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 3.6e-40 168.7 149 59.7
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 2.3e-39 166.0 158 57.0
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 3.1e-39 165.6 146 56.2
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 6.8e-39 164.5 158 56.3
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 1.2e-38 163.7 158 56.3
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 2.9e-37 159.1 158 55.1
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.1e-36 157.1 143 59.4
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.9e-36 156.4 160 53.8
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 3.2e-36 155.6 143 60.1
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 7.1e-36 154.5 143 58.7
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 7.1e-36 154.5 143 58.7
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 7.1e-36 154.5 143 58.7
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 7.1e-36 154.5 143 58.7
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 9.2e-36 154.1 155 55.5
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 1.6e-35 153.3 149 56.4
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 2.7e-35 152.5 152 55.3
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 3.5e-35 152.1 152 53.9
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 1.0e-34 150.6 126 59.5
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 1.3e-34 150.2 115 66.1
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 3.0e-34 149.1 120 59.2
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 3.0e-34 149.1 120 59.2
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 3.9e-34 148.7 128 57.8
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 5.1e-34 148.3 143 55.2
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 8.6e-34 147.5 152 53.3
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 8.6e-34 147.5 152 55.9
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.9e-33 146.4 117 62.4
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 1.9e-33 146.4 160 51.9
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 1.9e-33 146.4 160 51.9
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 4.3e-33 145.2 158 48.7
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 4.3e-33 145.2 159 50.3
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 5.6e-33 144.8 140 52.9
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 9.5e-33 144.1 152 52.0
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 9.5e-33 144.1 160 48.8
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 9.5e-33 144.1 145 51.7
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 1.2e-32 143.7 159 49.1
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.2e-32 143.7 153 48.4
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 2.1e-32 142.9 152 52.0
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 2.1e-32 142.9 160 48.1
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 2.8e-32 142.5 151 51.0
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 4.7e-32 141.7 160 46.2
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 4.7e-32 141.7 159 48.4
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 4.7e-32 141.7 154 50.0
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 4.7e-32 141.7 120 57.5
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 8.1e-32 141.0 128 54.7
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 1.1e-31 140.6 159 50.3
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 1.4e-31 140.2 120 56.7
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 2.3e-31 139.4 160 50.0
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 2.3e-31 139.4 104 68.3
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 3.1e-31 139.0 151 49.0
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 3.1e-31 139.0 160 49.4
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 3.1e-31 139.0 153 48.4
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 4.0e-31 138.7 151 47.7
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 4.0e-31 138.7 128 53.1
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 5.2e-31 138.3 133 58.6
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 5.2e-31 138.3 159 49.1
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.5e-30 136.7 151 46.4
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 9.9e-30 134.0 126 56.3
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 2.2e-29 132.9 142 51.4
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 6.4e-29 131.3 153 45.1
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 1.9e-28 129.8 153 47.1
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 1.9e-28 129.8 125 52.8
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 2.1e-27 126.3 152 48.7
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 2.7e-27 125.9 104 57.7
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 3.5e-27 125.6 144 48.6
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 1.3e-26 123.6 151 49.0
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 1.3e-26 123.6 105 56.2
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 6.6e-26 121.3 156 50.0
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.9e-25 119.8 158 48.7
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 2.5e-25 119.4 124 53.2
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 2.5e-25 119.4 121 53.7
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 4.3e-25 118.6 101 59.4
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 5.6e-25 118.2 111 54.1
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 7.3e-25 117.9 121 52.9
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 9.6e-25 117.5 151 47.7
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 9.6e-25 117.5 134 47.8
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 1.2e-24 117.1 133 49.6
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 6.8e-23 111.3 154 40.9
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 6.8e-23 111.3 154 40.9
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 2.0e-22 109.8 156 44.2
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 2.6e-22 109.4 95 57.9
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 7.6e-22 107.8 145 45.5
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 4.9e-21 105.1 106 53.8
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 1.4e-20 103.6 139 46.0
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 1.9e-20 103.2 119 46.2
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 2.4e-20 102.8 74 66.2
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 1.6e-19 100.1 125 45.6
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.6e-19 100.1 141 46.8
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 3.5e-19 99.0 115 47.8
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 1.3e-18 97.1 114 40.4
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 5.1e-18 95.1 143 39.2
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.3e-16 90.5 106 51.9
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 2.1e-16 89.7 101 48.5
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 4.8e-16 88.6 80 57.5
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 4.0e-15 85.5 160 37.5
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 4.0e-15 85.5 160 36.9
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 5.3e-15 85.1 124 38.7
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 4.4e-14 82.0 112 41.1
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 7.6e-14 81.3 126 34.9
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 1.7e-13 80.1 116 39.7
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 1.2e-11 73.9 114 38.6
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 3.0e-10 69.3 115 33.0
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.8e-07 60.1 62 43.5
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 1.8e-07 60.1 106 31.1
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 3.1e-07 59.3 62 43.5
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 3.1e-07 59.3 149 30.2


User provided reference genes

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