Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G1552 Tripterygium wilfordii HOM05D006024 ORTHO05D007505 1.5e-206 722.6 360 100.0
CiPaw.13G165500 Carya illinoinensis HOM05D006024 ORTHO05D007505 4.8e-165 584.7 355 80.3
Potri.T085501 Populus trichocarpa HOM05D006024 ORTHO05D007505 3.8e-162 575.1 356 78.4
Potri.003G210900 Populus trichocarpa HOM05D006024 ORTHO05D007505 3.5e-160 568.5 356 78.1
Cfa009695 Carpinus fangiana HOM05D006024 ORTHO05D007505 1.3e-159 566.6 358 77.4
Thecc.09G223300 Theobroma cacao HOM05D006024 ORTHO05D007505 1.3e-159 566.6 360 77.2
GSVIVG01025335001 Vitis vinifera HOM05D006024 ORTHO05D007505 1.8e-159 566.2 360 76.1
Eucgr.J00813 Eucalyptus grandis HOM05D006024 ORTHO05D007505 3.3e-158 562.0 360 74.7
Prupe.6G018500 Prunus persica HOM05D006024 ORTHO05D007505 4.3e-158 561.6 359 76.3
Ciclev10015756m.g Citrus clementina HOM05D006024 ORTHO05D007505 1.3e-157 560.1 356 77.8
MD11G1022800 Malus domestica HOM05D006024 ORTHO05D007505 1.3e-157 560.1 356 77.8
RcHm_v2.0_Chr5g0078111 Rosa chinensis HOM05D006024 ORTHO05D007505 2.2e-157 559.3 360 76.7
Manes.14G014400 Manihot esculenta HOM05D006024 ORTHO05D007505 8.2e-157 557.4 361 77.3
Cpa.g.sc84.110 Carica papaya HOM05D006024 ORTHO05D007505 1.1e-156 557.0 360 75.6
FvH4_3g43551 Fragaria vesca HOM05D006024 ORTHO05D007505 1.1e-156 557.0 360 76.4
PGR119G1295 Punica granatum HOM05D006024 ORTHO05D007505 1.4e-156 556.6 361 76.2
CANSAT54G0336 Cannabis sativa HOM05D006024 ORTHO05D007505 3.1e-156 555.4 356 77.0
Gohir.D06G112300 Gossypium hirsutum HOM05D006024 ORTHO05D007505 3.4e-155 552.0 360 75.3
Gorai.010G128200 Gossypium raimondii HOM05D006024 ORTHO05D007505 3.4e-155 552.0 360 75.3
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla HOM05D006024 ORTHO05D007505 1.0e-154 550.4 359 75.2
COL.COLO4_09894 Corchorus olitorius HOM05D006024 ORTHO05D007505 5.5e-153 544.7 360 73.6
Aqoxy1G00184 Aquilegia oxysepala HOM05D006024 ORTHO05D007505 9.4e-153 543.9 360 73.9
Atru.chr3.2505 Acer truncatum HOM05D006024 ORTHO05D007505 7.9e-152 540.8 362 74.6
Cc01_g04140 Coffea canephora HOM05D006024 ORTHO05D007505 1.0e-151 540.4 360 74.7
PSO339G6331 Papaver somniferum HOM05D006024 ORTHO05D007505 1.1e-150 537.0 361 72.3
Sed0023125 Sechium edule HOM05D006024 ORTHO05D007505 1.1e-150 537.0 360 75.6
CsaV3_4G023790 Cucumis sativus L. HOM05D006024 ORTHO05D007505 4.3e-150 535.0 360 75.0
CSS0019947 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 5.7e-150 534.6 360 75.3
CSS0045029 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 5.7e-150 534.6 360 75.3
FAN11G3540 Fragaria x ananassa HOM05D006024 ORTHO05D007505 7.4e-150 534.3 363 74.4
Oeu042179.3 Olea europaea HOM05D006024 ORTHO05D007505 7.4e-150 534.3 360 71.7
A05p27990 Brassica napus HOM05D006024 ORTHO05D007505 1.7e-149 533.1 359 73.8
Sopen01g002620 Solanum pennellii HOM05D006024 ORTHO05D007505 3.7e-149 531.9 360 71.7
Nn7g36060 Nelumbo nucifera HOM05D006024 ORTHO05D007505 8.2e-149 530.8 360 72.5
QL01p006224 Quercus lobata HOM05D006024 ORTHO05D007505 8.2e-149 530.8 387 69.8
Solyc01g006630.3 Solanum lycopersicum HOM05D006024 ORTHO05D007505 1.1e-148 530.4 360 71.4
Lj4g0026168 Lotus japonicus HOM05D006024 ORTHO05D007505 1.8e-148 529.6 358 72.9
Glyma.13G342800 Glycine max HOM05D006024 ORTHO05D007505 5.3e-148 528.1 356 73.3
Lj3g0007180 Lotus japonicus HOM05D006024 ORTHO05D007505 6.9e-148 527.7 358 72.9
Duzib168G0763 Durio zibethinus HOM05D006024 ORTHO05D007505 1.2e-147 526.9 360 72.8
MELO3C014640.2 Cucumis melo HOM05D006024 ORTHO05D007505 1.5e-147 526.6 361 74.0
Sp3g18810 Schrenkiella parvula HOM05D006024 ORTHO05D007505 1.5e-147 526.6 356 73.6
Phvul.005G150400 Phaseolus vulgaris HOM05D006024 ORTHO05D007505 2.6e-147 525.8 356 74.4
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 1.3e-146 523.5 356 74.4
CARHR096620 Cardamine hirsuta HOM05D006024 ORTHO05D007505 1.7e-146 523.1 356 73.3
Thhalv10021019m.g Eutrema salsugineum HOM05D006024 ORTHO05D007505 2.2e-146 522.7 356 73.6
AL3G34710 Arabidopsis lyrata HOM05D006024 ORTHO05D007505 8.5e-146 520.8 356 73.0
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea HOM05D006024 ORTHO05D007505 8.5e-146 520.8 354 73.4
Ca_01271_v3 Cicer arietinum L. HOM05D006024 ORTHO05D007505 8.5e-146 520.8 356 74.2
AT3G20790 Arabidopsis thaliana HOM05D006024 ORTHO05D007505 1.9e-145 519.6 356 72.5
Carub.0003s2075 Capsella rubella HOM05D006024 ORTHO05D007505 9.4e-145 517.3 356 72.2
THA.LOC104816910 Tarenaya hassleriana HOM05D006024 ORTHO05D007505 1.2e-144 516.9 357 71.4
TPR.G18832 Trifolium pratense HOM05D006024 ORTHO05D007505 2.7e-144 515.8 360 73.9
HanXRQChr02g0056471 Helianthus annuus HOM05D006024 ORTHO05D007505 1.0e-143 513.8 357 71.7
BcaC05g28281 Brassica carinata HOM05D006024 ORTHO05D007505 3.0e-143 512.3 356 72.2
BolC5t33061H Brassica oleracea HOM05D006024 ORTHO05D007505 6.7e-143 511.1 356 72.2
BraA05t21682Z Brassica rapa HOM05D006024 ORTHO05D007505 6.7e-143 511.1 359 71.6
Lalb_Chr24g0396941 Lupinus albus HOM05D006024 ORTHO05D007505 8.8e-143 510.8 356 71.9
BcaB06g26149 Brassica carinata HOM05D006024 ORTHO05D007505 2.0e-142 509.6 356 71.9
DCAR_002037 Daucus carota HOM05D006024 ORTHO05D007505 2.0e-142 509.6 356 71.1
C05p43290 Brassica napus HOM05D006024 ORTHO05D007505 7.4e-142 507.7 356 71.3
MSTRG.21409 Avicennia marina HOM05D006024 ORTHO05D007505 4.8e-141 505.0 356 71.1
Nitab4.5_0003796g0050 Nicotiana tabacum HOM05D006024 ORTHO05D007505 1.2e-139 500.4 356 70.8
Lsat_1_v5_gn_6_50101 Lactuca sativa HOM05D006024 ORTHO05D007505 1.0e-138 497.3 358 69.6
Medtr2g098500 Medicago truncatula HOM05D006024 ORTHO05D007505 2.2e-138 496.1 356 72.8
Peaxi162Scf00559g00415 Petunia axillaris HOM05D006024 ORTHO05D007505 6.5e-138 494.6 359 68.8
Dinv36303 Davidia involucrata HOM05D006024 ORTHO05D007505 1.1e-137 493.8 317 76.0
FAN11G0987 Fragaria x ananassa HOM05D006024 ORTHO05D007505 9.4e-137 490.7 363 70.0
CAN.G388.68 Capsicum annuum HOM05D006024 ORTHO05D007505 2.1e-136 489.6 388 64.9
Gohir.A06G108500 Gossypium hirsutum HOM05D006024 ORTHO05D007505 6.1e-136 488.0 360 68.6
MSTRG.12483 Avicennia marina HOM05D006024 ORTHO05D007505 5.2e-135 485.0 356 68.3
EL10Ac4g10317 Beta vulgaris HOM05D006024 ORTHO05D007505 1.8e-132 476.5 360 66.7
AUR62000078 Chenopodium quinoa HOM05D006024 ORTHO05D007505 7.0e-132 474.6 360 66.9
AUR62019251 Chenopodium quinoa HOM05D006024 ORTHO05D007505 3.5e-131 472.2 360 66.4
Os09g0280300 Oryza sativa ssp. japonica HOM05D006024 ORTHO05D007505 5.9e-131 471.5 356 66.0
Aa31LG8G7600 Aethionema arabicum HOM05D006024 ORTHO05D007505 6.5e-130 468.0 355 68.5
Hund22080 Selenicereus undatus HOM05D006024 ORTHO05D007505 5.5e-129 464.9 360 66.1
Migut.N02293 Erythranthe guttata HOM05D006024 ORTHO05D007505 1.6e-128 463.4 358 64.5
Migut.D00559 Erythranthe guttata HOM05D006024 ORTHO05D007505 4.0e-127 458.8 362 65.2
ATR0605G294 Amborella trichopoda HOM05D006024 ORTHO05D007505 7.5e-126 454.5 356 62.9
Lju1319A3G40 Lonicera japonica HOM05D006024 ORTHO05D007505 9.8e-126 454.1 375 64.0
MBI04_g27131_MAGBIO Magnolia biondii HOM05D006024 ORTHO05D007505 2.8e-125 452.6 356 64.0
Lj1A365G18 Lonicera japonica HOM05D006024 ORTHO05D007505 4.8e-125 451.8 379 63.1
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea HOM05D006024 ORTHO05D007505 1.2e-123 447.2 352 66.2
vmacro04169 Vaccinium macrocarpon HOM05D006024 ORTHO05D007505 1.6e-123 446.8 473 53.5
VMungo0251G0909 Vigna mungo HOM05D006024 ORTHO05D007505 2.0e-123 446.4 356 63.8
VMungo1080G1390 Vigna mungo HOM05D006024 ORTHO05D007505 1.7e-122 443.4 356 62.6
SEGI_39854 Sequoiadendron giganteum HOM05D006024 ORTHO05D007505 2.5e-113 412.9 356 59.0
SGA_v2.0_scaffold1G00800 Striga asiatica HOM05D006024 ORTHO05D007505 1.7e-109 400.2 361 59.0
TAR636G0774 Trochodendron aralioides HOM05D006024 ORTHO05D007505 9.5e-105 384.4 252 74.2
unitig_8.g3081 Utricularia gibba HOM05D006024 ORTHO05D007505 1.2e-102 377.5 359 57.1
Sc06g0004470 Simmondsia chinensis HOM05D006024 ORTHO05D007505 2.6e-102 376.3 257 70.8
Rhsim13G0225400 Rhododendron simsii HOM05D006024 ORTHO05D007505 2.2e-101 373.2 258 70.5
Pp3c6_24290 Physcomitrium patens HOM05D006024 ORTHO05D007505 7.0e-100 368.2 350 51.7
Mapoly0150s0011 Marchantia polymorpha HOM05D006024 ORTHO05D007505 2.8e-96 356.3 357 49.0
Haze_23046 Corylus avellana HOM05D006024 ORTHO05D007505 4.4e-94 349.0 296 61.8
ECA233G0904 Erigeron canadensis HOM05D006024 ORTHO05D007505 5.8e-94 348.6 251 68.9
Pp3c16_13070 Physcomitrium patens HOM05D006024 ORTHO05D007505 2.9e-93 346.3 374 48.1
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis HOM05D006024 ORTHO05D007505 1.5e-86 323.9 358 47.2
SMO146G0097 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 5.8e-86 322.0 343 48.7
Nitab4.5_0008137g0040 Nicotiana tabacum HOM05D006024 ORTHO05D007505 9.9e-86 321.2 356 51.7
SMO116G0160 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 1.4e-84 317.4 364 47.3
ClCG02G023630 Citrullus lanatus HOM05D006024 ORTHO05D007505 3.0e-82 309.7 201 77.6
Zm00001eb094580 Zea mays HOM05D006024 ORTHO05D007505 5.8e-78 295.4 204 70.1
SMO144G0113 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 4.2e-76 289.3 353 44.8
AagrBONN_evm.TU.Sc2ySwM_344.254 Anthoceros agrestis HOM05D006024 ORTHO05D007505 6.2e-72 275.4 354 41.2
Mapoly0033s0066 Marchantia polymorpha HOM05D006024 ORTHO05D007505 2.9e-69 266.5 354 41.8
Pp3c3_20310 Physcomitrium patens HOM05D006024 ORTHO05D007505 1.9e-68 263.8 356 41.0
FAN16G2307 Fragaria x ananassa HOM05D006024 ORTHO05D007505 8.1e-56 221.9 149 75.8
HPP92_000457 Vanilla planifolia HOM05D006024 ORTHO05D007505 2.0e-46 190.7 148 65.5
TAR636G1381 Trochodendron aralioides HOM05D006024 ORTHO05D007505 3.0e-42 176.8 187 54.5
Cre01.g023300 Chlamydomonas reinhardtii HOM05D006024 ORTHO05D007505 1.9e-41 174.1 402 32.3
Psat7g086040 Pisum sativum HOM05D006024 ORTHO05D007505 5.0e-37 159.5 228 44.7
Sc06g0004480 Simmondsia chinensis HOM05D006024 ORTHO05D007505 1.2e-35 154.8 104 73.1
Cfa023900 Carpinus fangiana HOM05D006024 ORTHO05D007505 2.0e-33 147.5 359 29.8
Psat6g204000 Pisum sativum HOM05D006024 ORTHO05D007505 3.3e-33 146.7 153 56.9
ECA233G1997 Erigeron canadensis HOM05D006024 ORTHO05D007505 4.1e-31 139.8 109 63.3
Psat5g288680 Pisum sativum HOM05D006024 ORTHO05D007505 9.1e-31 138.7 93 73.1
FAN25G0441 Fragaria x ananassa HOM05D006024 ORTHO05D007505 2.2e-29 134.0 128 56.2
Rhsim13G0225300 Rhododendron simsii HOM05D006024 ORTHO05D007505 2.9e-29 133.7 90 73.3
Glyma.15G031500 Glycine max HOM05D006024 ORTHO05D007505 1.3e-24 118.2 134 52.2
Actinidia16298 Actinidia chinensis HOM05D006024 ORTHO05D007505 1.1e-23 115.2 77 70.1
CSS0049558 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 5.3e-23 112.8 88 69.3
CSS0042824 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 7.0e-23 112.5 88 68.2
Medtr8g016390 Medicago truncatula HOM05D006024 ORTHO05D007505 2.0e-22 110.9 98 63.3
Psat5g288640 Pisum sativum HOM05D006024 ORTHO05D007505 6.1e-19 99.4 121 52.9
CSS0043067 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 6.7e-18 95.9 95 56.8
C01p43430 Brassica napus HOM05D006024 ORTHO05D007505 8.8e-18 95.5 100 53.0
BolC1t04302H Brassica oleracea HOM05D006024 ORTHO05D007505 8.8e-18 95.5 100 53.0
Oeu037561.1 Olea europaea HOM05D006024 ORTHO05D007505 1.7e-13 81.3 51 72.5
BcaC09g49021 Brassica carinata HOM05D006024 ORTHO05D007505 1.5e-09 68.2 82 51.2
Mapoly0041s0070 Marchantia polymorpha HOM05D057041 ORTHO05D018939 1.6e-06 58.2 212 22.6


User provided reference genes

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