Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G1520 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 7.7e-83 310.5 160 100.0
TWI34G1341 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 3.7e-53 211.8 152 75.0
Ciclev10019191m.g Citrus clementina HOM05D004311 ORTHO05D005145 1.1e-31 140.6 107 68.2
vmacro00589 Vaccinium macrocarpon HOM05D004311 ORTHO05D005145 3.1e-31 139.0 105 67.6
Manes.11G116001 Manihot esculenta HOM05D004311 ORTHO05D005145 9.0e-31 137.5 150 54.7
Rhsim09G0031800 Rhododendron simsii HOM05D004311 ORTHO05D005145 9.0e-31 137.5 147 53.7
Potri.017G036200 Populus trichocarpa HOM05D004311 ORTHO05D005145 2.6e-30 136.0 153 52.3
Lj6A60T46 Lonicera japonica HOM05D004311 ORTHO05D005145 1.7e-29 133.3 150 54.0
Cpa.g.sc73.18 Carica papaya HOM05D004311 ORTHO05D005145 2.9e-29 132.5 149 50.3
CiPaw.01G102900 Carya illinoinensis HOM05D004311 ORTHO05D005145 2.9e-29 132.5 150 51.3
Cc03_g13030 Coffea canephora HOM05D004311 ORTHO05D005145 2.9e-29 132.5 123 60.2
Potri.007G124150 Populus trichocarpa HOM05D004311 ORTHO05D005145 4.9e-29 131.7 153 51.6
Haze_00714 Corylus avellana HOM05D004311 ORTHO05D005145 1.1e-28 130.6 150 52.0
Haze_00722 Corylus avellana HOM05D001997 ORTHO05D004620 2.4e-28 129.4 150 51.3
Actinidia35905 Actinidia chinensis HOM05D004311 ORTHO05D005145 3.2e-28 129.0 145 51.7
QL10p045440 Quercus lobata HOM05D004311 ORTHO05D005145 4.2e-28 128.6 150 51.3
Atru.chr3.1596 Acer truncatum HOM05D004311 ORTHO05D005145 5.4e-28 128.3 114 62.3
Gohir.D10G132100 Gossypium hirsutum HOM05D004311 ORTHO05D005145 5.4e-28 128.3 106 62.3
Atru.chr5.2612 Acer truncatum HOM05D004311 ORTHO05D005145 7.1e-28 127.9 164 48.2
Duzib268G0197 Durio zibethinus HOM05D004311 ORTHO05D005145 7.1e-28 127.9 147 50.3
Eucgr.A00251 Eucalyptus grandis HOM05D004311 ORTHO05D005145 7.1e-28 127.9 111 62.2
Gorai.011G145800 Gossypium raimondii HOM05D004311 ORTHO05D005145 7.1e-28 127.9 106 62.3
Sabra17G0023900 Salix brachista HOM05D004311 ORTHO05D005145 9.3e-28 127.5 152 51.3
Sc19g0002150 Simmondsia chinensis HOM05D004311 ORTHO05D005145 9.3e-28 127.5 108 63.9
Os11g0293300 Oryza sativa ssp. japonica HOM05D004311 ORTHO05D005145 1.2e-27 127.1 96 64.6
Peaxi162Scf00319g00915 Petunia axillaris HOM05D004311 ORTHO05D005145 1.2e-27 127.1 98 65.3
Prupe.1G189100 Prunus persica HOM05D004311 ORTHO05D005145 1.6e-27 126.7 108 61.1
COL.COLO4_24387 Corchorus olitorius HOM05D004311 ORTHO05D005145 2.7e-27 125.9 108 59.3
Sabra17G0023400 Salix brachista HOM05D004311 ORTHO05D005145 2.7e-27 125.9 152 48.7
GSVIVG01013563001 Vitis vinifera HOM05D004311 ORTHO05D005145 3.5e-27 125.6 110 59.1
Actinidia33018 Actinidia chinensis HOM05D004311 ORTHO05D005145 4.6e-27 125.2 158 47.5
arahy.Tifrunner.gnm1.ann1.D3CYL9 Arachis hypogaea HOM05D004311 ORTHO05D005145 6.0e-27 124.8 95 65.3
arahy.Tifrunner.gnm1.ann1.TTS68P Arachis hypogaea HOM05D004311 ORTHO05D005145 6.0e-27 124.8 95 65.3
Gohir.A10G134400 Gossypium hirsutum HOM05D004311 ORTHO05D005145 6.0e-27 124.8 106 61.3
MD04G1038300 Malus domestica HOM05D004311 ORTHO05D005145 7.9e-27 124.4 153 49.0
Psat6g241440 Pisum sativum HOM05D004311 ORTHO05D005145 7.9e-27 124.4 95 66.3
Cfa015780 Carpinus fangiana HOM05D004311 ORTHO05D005145 1.3e-26 123.6 146 48.6
Thecc.04G184200 Theobroma cacao HOM05D004311 ORTHO05D005145 1.8e-26 123.2 108 59.3
Solyc09g098560.2 Solanum lycopersicum HOM05D004311 ORTHO05D005145 3.0e-26 122.5 151 44.4
TAR375G1135 Trochodendron aralioides HOM05D004311 ORTHO05D005145 3.0e-26 122.5 97 62.9
Zm00001eb248350 Zea mays HOM05D004311 ORTHO05D005145 3.9e-26 122.1 116 56.0
Glyma.20G245800 Glycine max HOM05D004311 ORTHO05D005145 5.1e-26 121.7 124 53.2
Sopen09g036480 Solanum pennellii HOM05D004311 ORTHO05D005145 5.1e-26 121.7 151 44.4
CAN.G710.65 Capsicum annuum HOM05D004311 ORTHO05D005145 6.7e-26 121.3 95 64.2
Lalb_Chr21g0307601 Lupinus albus HOM05D004311 ORTHO05D005145 8.7e-26 120.9 138 49.3
Medtr1g116530 Medicago truncatula HOM05D004311 ORTHO05D005145 8.7e-26 120.9 137 52.6
PGR083G0820 Punica granatum HOM05D004311 ORTHO05D005145 8.7e-26 120.9 102 58.8
Lj5g0018220 Lotus japonicus HOM05D004311 ORTHO05D005145 1.1e-25 120.6 95 62.1
MSTRG.20570 Avicennia marina HOM05D004311 ORTHO05D005145 1.5e-25 120.2 113 53.1
FAN17G0085 Fragaria x ananassa HOM05D004311 ORTHO05D005145 1.5e-25 120.2 128 53.1
SGA_v2.0_scaffold12G06156 Striga asiatica HOM05D004311 ORTHO05D005145 1.5e-25 120.2 102 58.8
Aqoxy5G04052 Aquilegia oxysepala HOM05D004311 ORTHO05D005145 1.9e-25 119.8 104 61.5
Glyma.10G295800 Glycine max HOM05D004311 ORTHO05D005145 1.9e-25 119.8 149 47.0
Nitab4.5_0000526g0040 Nicotiana tabacum HOM05D004311 ORTHO05D005145 1.9e-25 119.8 106 57.5
ClCG07G015850 Citrullus lanatus HOM05D004311 ORTHO05D005145 2.5e-25 119.4 137 49.6
Dinv44218 Davidia involucrata HOM05D004311 ORTHO05D005145 2.5e-25 119.4 106 61.3
Lsat_1_v5_gn_6_54900 Lactuca sativa HOM05D004311 ORTHO05D005145 2.5e-25 119.4 96 63.5
MBI08_g33649_MAGBIO Magnolia biondii HOM05D004311 ORTHO05D005145 2.5e-25 119.4 124 53.2
DCAR_028443 Daucus carota HOM05D004311 ORTHO05D005145 4.3e-25 118.6 90 65.6
FAN07G0445 Fragaria x ananassa HOM05D004311 ORTHO05D005145 4.3e-25 118.6 128 53.1
FAN22G0235 Fragaria x ananassa HOM05D004311 ORTHO05D005820 4.3e-25 118.6 128 53.1
AUR62030033 Chenopodium quinoa HOM05D004311 ORTHO05D005145 5.6e-25 118.2 95 60.0
Nitab4.5_0006710g0020 Nicotiana tabacum HOM05D004311 ORTHO05D005145 5.6e-25 118.2 95 62.1
TPR.G10413 Trifolium pratense HOM05D004311 ORTHO05D005145 5.6e-25 118.2 95 64.2
CANSAT11G1749 Cannabis sativa HOM05D004311 ORTHO05D005145 7.4e-25 117.9 117 53.8
Hund12225 Selenicereus undatus HOM05D004311 ORTHO05D005145 7.4e-25 117.9 106 55.7
HPP92_009171 Vanilla planifolia HOM05D004311 ORTHO05D005145 1.3e-24 117.1 96 61.5
AUR62002610 Chenopodium quinoa HOM05D004311 ORTHO05D005145 1.6e-24 116.7 110 53.6
FvH4_4g11290 Fragaria vesca HOM05D004311 ORTHO05D005145 1.6e-24 116.7 128 52.3
Sed0012126 Sechium edule HOM05D004311 ORTHO05D005145 2.1e-24 116.3 113 57.5
RcHm_v2.0_Chr4g0407531 Rosa chinensis HOM05D004311 ORTHO05D005145 2.8e-24 115.9 108 56.5
THA.LOC104821356 Tarenaya hassleriana HOM05D004311 ORTHO05D005145 2.8e-24 115.9 99 58.6
Nn2g11494 Nelumbo nucifera HOM05D004311 ORTHO05D005145 1.1e-23 114.0 94 59.6
SHI06503 Sapria himalayana HOM05D004311 ORTHO05D005145 1.1e-23 114.0 103 57.3
VMungo0720G0448 Vigna mungo HOM05D004311 ORTHO05D005145 2.4e-23 112.8 115 51.3
MELO3C017696.2 Cucumis melo HOM05D004311 ORTHO05D005145 3.1e-23 112.5 133 50.4
Phvul.007G004100 Phaseolus vulgaris HOM05D004311 ORTHO05D005145 3.1e-23 112.5 115 52.2
Migut.G01038 Erythranthe guttata HOM05D004311 ORTHO05D005145 5.3e-23 111.7 143 42.7
Ca_11399_v3 Cicer arietinum L. HOM05D004311 ORTHO05D005145 6.9e-23 111.3 95 60.0
Ca_11402_v3 Cicer arietinum L. HOM05D004311 ORTHO05D005145 6.9e-23 111.3 95 60.0
Ca_29593_v3 Cicer arietinum L. HOM05D004311 ORTHO05D005145 6.9e-23 111.3 95 60.0
EL10Ac3g06308 Beta vulgaris HOM05D004311 ORTHO05D005145 9.0e-23 110.9 95 55.8
SalBow3G3821 Salvia bowleyana HOM05D004311 ORTHO05D005145 1.2e-22 110.5 142 46.5
HanXRQChr07g0186701 Helianthus annuus HOM05D004311 ORTHO05D005145 2.6e-22 109.4 96 58.3
CsaV3_4G003570 Cucumis sativus L. HOM05D004311 ORTHO05D005145 1.3e-21 107.1 135 46.7
CDE09G0340 Ceratophyllum demersum HOM05D004311 ORTHO05D005145 1.4e-20 103.6 95 53.7
unitig_8.g3035 Utricularia gibba HOM05D004311 ORTHO05D005145 5.5e-20 101.7 119 45.4
PSO675G5961 Papaver somniferum HOM05D004311 ORTHO05D005145 9.3e-20 100.9 101 52.5
CDE02G0781 Ceratophyllum demersum HOM05D004311 ORTHO05D005145 2.7e-19 99.4 95 53.7
PSO017G7323 Papaver somniferum HOM05D004311 ORTHO05D005145 2.7e-19 99.4 101 52.5
Carub.0004s2496 Capsella rubella HOM05D004311 ORTHO05D005145 2.3e-18 96.3 91 53.8
Sp4g24640 Schrenkiella parvula HOM05D004311 ORTHO05D005145 3.9e-18 95.5 94 51.1
CARHR055450 Cardamine hirsuta HOM05D004311 ORTHO05D005145 1.5e-17 93.6 97 52.6
ATR0743G139 Amborella trichopoda HOM05D004311 ORTHO05D005145 2.5e-17 92.8 93 52.7
BcaC02g12437 Brassica carinata HOM05D004311 ORTHO05D005145 3.3e-17 92.4 94 47.9
Thhalv10017985m.g Eutrema salsugineum HOM05D004311 ORTHO05D005145 3.3e-17 92.4 94 51.1
BcaB06g29252 Brassica carinata HOM05D004311 ORTHO05D005145 4.3e-17 92.0 92 51.1
BcaNung05216 Brassica carinata HOM05D004311 ORTHO05D005145 4.3e-17 92.0 92 51.1
A05p03080 Brassica napus HOM05D004311 ORTHO05D005145 4.3e-17 92.0 94 46.8
BraA05t19299Z Brassica rapa HOM05D004311 ORTHO05D005145 4.3e-17 92.0 94 46.8
BcaNung03232 Brassica carinata HOM05D004311 ORTHO05D005145 5.6e-17 91.7 94 47.9
SEGI_09077 Sequoiadendron giganteum HOM05D004311 ORTHO05D005145 5.6e-17 91.7 95 49.5
C04p03710 Brassica napus HOM05D004311 ORTHO05D005145 2.1e-16 89.7 94 44.7
BolC4t22005H Brassica oleracea HOM05D004311 ORTHO05D005145 2.1e-16 89.7 94 44.7
AT1G54380 Arabidopsis thaliana HOM05D004311 ORTHO05D005145 2.8e-16 89.4 94 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1282 Anthoceros agrestis HOM05D004311 ORTHO05D005145 4.8e-16 88.6 95 45.3
BcaC02g07234 Brassica carinata HOM05D004311 ORTHO05D005145 4.8e-16 88.6 94 46.8
C04p69770 Brassica napus HOM05D004311 ORTHO05D005145 4.8e-16 88.6 94 46.8
Pp3c18_5230 Physcomitrium patens HOM05D004311 ORTHO05D005145 4.8e-16 88.6 146 39.0
Aa31LG2G1780 Aethionema arabicum HOM05D004311 ORTHO05D005145 1.1e-15 87.4 138 42.0
SMO273G0052 Selaginella moellendorffii HOM05D004311 ORTHO05D005145 2.4e-15 86.3 100 47.0
SMO351G0426 Selaginella moellendorffii HOM05D004311 ORTHO05D005145 2.4e-15 86.3 100 47.0
BcaNung00544 Brassica carinata HOM05D004311 ORTHO05D005145 2.2e-13 79.7 88 45.5
SMO174G0256 Selaginella moellendorffii HOM05D004311 ORTHO05D005145 6.5e-13 78.2 94 46.8
Lalb_Chr02g0144311 Lupinus albus HOM05D004311 ORTHO05D005145 3.2e-12 75.9 124 43.5
CBR_g48670 Chara braunii HOM05D004311 ORTHO05D005145 5.5e-12 75.1 100 43.0
Mapoly0064s0042 Marchantia polymorpha HOM05D004311 ORTHO05D005145 1.6e-08 63.5 110 35.5
Cre09.g405650 Chlamydomonas reinhardtii HOM05D004311 ORTHO05D005145 3.4e-06 55.8 66 43.9
SGA_v2.0_scaffold290G47298 Striga asiatica HOM05D002786 ORTHO05D003493 4.5e-06 55.5 59 50.8


User provided reference genes

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