Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.6e-261 905.6 465 100.0
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.7e-203 711.1 472 81.8
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 8.3e-186 654.1 468 76.1
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 9.7e-102 374.8 439 51.7
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 1.2e-99 367.9 443 49.7
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 7.7e-99 365.2 456 49.6
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 1.2e-96 357.8 441 49.2
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 1.6e-96 357.5 448 48.2
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 5.2e-95 352.4 444 49.1
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 4.4e-94 349.4 446 48.7
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 4.8e-93 345.9 425 48.9
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 8.2e-93 345.1 445 47.6
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 2.4e-92 343.6 442 48.6
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 3.1e-92 343.2 474 47.7
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 3.5e-91 339.7 445 47.0
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 2.2e-90 337.0 440 48.0
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 1.9e-89 334.0 440 47.3
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.6e-88 330.9 442 47.5
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 6.1e-88 328.9 452 45.4
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 8.0e-88 328.6 445 45.6
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.4e-87 327.8 445 45.8
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 1.4e-87 327.8 445 45.8
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 5.2e-87 325.9 445 44.9
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.0e-86 323.9 445 45.8
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 5.7e-86 322.4 445 45.6
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.8e-85 320.1 445 44.7
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 3.7e-85 319.7 475 44.4
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 4.8e-85 319.3 441 47.6
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.3e-85 318.9 443 45.1
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 8.3e-85 318.5 443 44.0
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.7e-83 313.5 447 45.0
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 7.7e-83 312.0 440 45.0
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.3e-82 311.2 443 43.6
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 1.7e-82 310.8 446 44.8
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 1.7e-82 310.8 443 44.9
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.1e-81 308.1 443 46.3
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 4.2e-81 306.2 443 46.5
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 4.2e-81 306.2 443 43.3
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 7.2e-81 305.4 441 46.9
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 9.4e-81 305.1 444 44.1
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 2.1e-80 303.9 445 45.4
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 3.6e-80 303.1 442 44.1
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 1.0e-79 301.6 449 43.4
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 1.4e-79 301.2 443 44.5
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 1.4e-79 301.2 443 44.7
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 4.0e-79 299.7 449 43.9
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.6e-78 297.0 367 49.6
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 4.9e-77 292.7 445 42.7
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 1.6e-75 287.7 442 43.7
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 4.5e-75 286.2 444 43.2
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 3.8e-74 283.1 439 42.6
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 1.1e-73 281.6 446 41.5
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 2.1e-72 277.3 442 43.0
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 4.7e-72 276.2 329 49.5
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 6.1e-72 275.8 442 41.9
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 3.0e-71 273.5 443 41.5
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 4.0e-71 273.1 444 41.0
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 5.2e-71 272.7 444 42.3
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 6.8e-71 272.3 386 43.3
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 8.9e-71 271.9 446 41.0
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 1.5e-70 271.2 444 40.8
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 1.5e-70 271.2 478 39.3
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 4.6e-67 259.6 443 38.6
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 5.9e-67 259.2 444 40.5
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.3e-66 257.3 534 36.3
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 1.5e-65 254.6 378 42.6
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 4.0e-63 246.5 438 37.7
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 6.8e-63 245.7 441 37.9
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 8.9e-63 245.4 442 40.5
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 3.7e-61 240.0 438 39.0
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 1.1e-60 238.4 442 39.8
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.1e-60 236.5 449 38.8
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 4.1e-60 236.5 583 33.6
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 2.3e-58 230.7 447 38.3
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 3.0e-58 230.3 473 38.3
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 1.1e-57 228.4 449 37.9
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 1.6e-56 224.6 448 37.7
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 1.6e-56 224.6 441 37.9
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 1.4e-55 221.5 454 38.3
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 3.1e-55 220.3 364 41.8
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 4.0e-55 219.9 365 41.6
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 5.2e-55 219.5 365 42.5
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 5.2e-55 219.5 377 41.9
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 6.8e-55 219.2 364 41.5
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 1.5e-54 218.0 366 41.8
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 2.6e-54 217.2 358 43.0
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 5.8e-54 216.1 437 38.0
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 7.5e-54 215.7 364 41.2
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 1.7e-53 214.5 364 42.0
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 6.4e-53 212.6 365 41.6
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 8.3e-53 212.2 382 40.1
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 3.2e-52 210.3 435 35.4
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 3.5e-51 206.8 364 40.9
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 2.3e-50 204.1 395 37.2
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 1.6e-48 198.0 383 39.4
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 3.6e-48 196.8 402 37.3
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 4.4e-46 189.9 460 34.8
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 7.6e-46 189.1 486 32.7
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 9.9e-46 188.7 436 35.3
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 1.1e-44 185.3 385 35.3
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 4.6e-43 179.9 450 34.0
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 1.0e-42 178.7 408 34.6
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 3.9e-42 176.8 408 34.3
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 3.9e-42 176.8 443 33.9
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 6.6e-42 176.0 446 33.6
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 1.5e-41 174.9 432 35.2
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 9.6e-41 172.2 448 35.0
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 1.2e-40 171.8 424 34.9
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 4.4e-38 163.3 296 38.2
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 3.2e-36 157.1 262 39.3
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 6.0e-35 152.9 469 31.6
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 6.6e-34 149.4 246 36.6
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 8.7e-34 149.1 212 42.9
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 8.7e-34 149.1 484 30.0
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 3.1e-23 114.0 236 33.9
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 2.6e-22 110.9 218 35.3
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 6.4e-21 106.3 441 27.7
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 1.3e-08 65.5 341 23.8
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 2.0e-06 58.2 146 34.2
Zm00001eb203960 Zea mays HOM05D006267 ORTHO05D007490 1.0e-05 55.8 181 28.7


User provided reference genes

Program Settings