Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 2.4e-92 342.0 161 100.0
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 8.1e-80 300.4 161 85.1
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 3.1e-79 298.5 161 85.7
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.2e-78 296.6 161 83.2
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.4e-78 294.7 161 83.2
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 4.4e-78 294.7 161 82.6
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 7.5e-78 293.9 160 81.9
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.7e-77 291.6 161 79.5
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 3.7e-77 291.6 162 83.3
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 6.4e-77 290.8 160 81.2
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 8.3e-77 290.4 161 80.1
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 8.3e-77 290.4 161 83.2
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.9e-76 289.3 158 82.9
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 2.4e-76 288.9 161 82.0
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 3.2e-76 288.5 161 80.1
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 3.2e-76 288.5 158 81.6
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 4.1e-76 288.1 162 80.9
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 4.1e-76 288.1 161 83.9
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 5.4e-76 287.7 158 81.0
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 5.4e-76 287.7 161 82.6
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 5.4e-76 287.7 161 80.1
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 7.1e-76 287.3 158 81.6
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 7.1e-76 287.3 160 81.9
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.1e-76 287.3 160 81.9
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.1e-76 287.3 160 81.9
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 9.2e-76 287.0 158 81.0
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.2e-75 286.6 161 78.9
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.6e-75 286.2 159 83.0
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.6e-75 286.2 159 83.0
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.7e-75 285.4 162 82.1
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 3.5e-75 285.0 162 80.9
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 4.6e-75 284.6 161 81.4
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 6.0e-75 284.3 158 81.6
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 6.0e-75 284.3 160 80.0
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 6.0e-75 284.3 159 82.4
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 6.0e-75 284.3 162 79.6
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 80.7
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 79.5
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.3e-74 282.3 158 81.0
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 2.3e-74 282.3 161 79.5
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.0e-74 282.0 161 75.8
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 3.9e-74 281.6 161 77.6
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 3.9e-74 281.6 155 82.6
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 5.1e-74 281.2 160 77.5
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 6.6e-74 280.8 160 78.8
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 8.6e-74 280.4 152 82.2
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 8.6e-74 280.4 159 78.0
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 8.6e-74 280.4 154 82.5
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.1e-73 280.0 161 78.9
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.1e-73 280.0 161 78.9
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.5e-73 279.6 161 80.1
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.5e-73 279.6 156 81.4
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 1.9e-73 279.3 162 77.8
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 5.6e-73 277.7 161 77.6
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 5.6e-73 277.7 161 77.0
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 7.3e-73 277.3 161 75.2
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 7.3e-73 277.3 161 74.5
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 7.3e-73 277.3 161 74.5
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 7.3e-73 277.3 158 77.2
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 9.5e-73 276.9 161 74.5
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.2e-72 276.6 161 77.6
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 1.6e-72 276.2 161 77.0
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 2.1e-72 275.8 161 73.9
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.8e-72 275.4 161 73.3
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.8e-72 275.4 161 77.0
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.8e-72 275.4 151 82.1
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 2.8e-72 275.4 161 80.7
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 3.6e-72 275.0 161 73.9
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 77.0
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 6.2e-72 274.2 158 77.8
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 8.1e-72 273.9 161 73.9
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.1e-71 273.5 161 72.7
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 1.1e-71 273.5 154 79.9
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.4e-71 273.1 161 77.0
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.4e-71 273.1 161 77.6
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.4e-71 272.3 158 76.6
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.4e-71 272.3 158 77.2
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 5.2e-71 271.2 158 74.7
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 71.4
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.2e-70 270.0 169 71.6
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 1.2e-70 270.0 162 74.7
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 2.0e-70 269.2 161 72.7
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 3.4e-70 268.5 148 83.8
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 4.4e-70 268.1 161 76.4
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 5.8e-70 267.7 167 71.3
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 7.6e-70 267.3 160 77.5
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.7e-69 266.2 154 76.6
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 3.8e-69 265.0 154 76.6
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 4.9e-69 264.6 214 61.2
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 8.4e-69 263.8 158 74.1
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 1.4e-68 263.1 161 77.0
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.4e-68 263.1 152 77.0
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 4.1e-68 261.5 149 76.5
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 1.9e-65 252.7 161 75.2
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 4.3e-65 251.5 156 74.4
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 3.1e-63 245.4 140 78.6
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 3.1e-63 245.4 157 67.5
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 5.2e-63 244.6 138 80.4
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 9.0e-63 243.8 137 77.4
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 4.4e-62 241.5 135 80.0
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.3e-61 240.0 135 80.0
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 6.4e-61 237.7 138 78.3
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 4.8e-56 221.5 152 69.7
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 3.1e-55 218.8 117 83.8
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 6.9e-55 217.6 114 84.2
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 9.9e-54 213.8 137 70.8
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 2.2e-53 212.6 122 81.1
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 2.9e-53 212.2 183 57.9
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.8e-53 211.8 142 62.7
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 4.9e-53 211.5 116 81.0
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.2e-51 206.8 142 61.3
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.1e-51 206.1 158 64.6
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 4.6e-51 204.9 146 57.5
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 1.3e-50 203.4 140 67.1
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 7.4e-49 197.6 161 59.0
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.6e-48 196.4 114 74.6
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.4e-46 188.7 102 77.5
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 3.5e-43 178.7 96 78.1
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 5.6e-41 171.4 95 78.9
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 5.8e-38 161.4 157 54.8
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 1.7e-37 159.8 102 68.6
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 8.4e-37 157.5 167 49.7
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 8.4e-37 157.5 135 60.7
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 6.7e-34 147.9 85 80.0
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 4.8e-32 141.7 86 76.7
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 4.3e-25 118.6 73 75.3
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 5.5e-20 101.7 52 80.8
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.7e-16 90.1 60 63.3
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 5.7e-09 65.1 71 43.7


User provided reference genes

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