Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 9.9e-118 426.8 214 100.0
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 1.4e-74 283.5 180 75.0
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 2.3e-74 282.7 182 75.3
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 2.3e-74 282.7 182 75.3
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 5.1e-74 281.6 195 71.8
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 8.8e-74 280.8 181 75.7
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 2.8e-72 275.8 182 74.2
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 1.2e-70 270.4 181 74.0
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 7.7e-70 267.7 180 71.7
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 1.3e-69 266.9 181 70.2
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 2.9e-69 265.8 181 71.3
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 2.9e-69 265.8 182 69.8
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 1.9e-68 263.1 183 69.4
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 2.1e-67 259.6 180 67.2
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 6.1e-67 258.1 207 61.8
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 1.0e-66 257.3 187 72.7
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 1.8e-66 256.5 182 74.2
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 3.0e-66 255.8 180 65.6
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 1.1e-65 253.8 185 72.4
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 2.0e-65 253.1 182 69.8
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 2.6e-65 252.7 181 70.2
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 1.7e-64 250.0 185 71.4
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 2.2e-64 249.6 181 68.5
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 4.8e-64 248.4 185 70.8
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 6.3e-64 248.1 188 68.6
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.4e-63 246.9 185 70.8
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.8e-63 246.5 185 70.3
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 3.1e-63 245.7 181 69.1
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 5.3e-63 245.0 184 69.0
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 7.0e-63 244.6 181 69.1
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 7.0e-63 244.6 182 67.0
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 2.0e-62 243.0 181 66.9
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 5.9e-62 241.5 181 68.0
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.0e-61 240.7 180 67.2
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 1.3e-61 240.4 182 67.6
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 2.2e-61 239.6 180 66.7
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 2.9e-61 239.2 180 69.4
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 6.5e-61 238.0 202 60.9
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 8.5e-61 237.7 185 67.6
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 3.2e-60 235.7 181 66.9
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 5.5e-60 235.0 182 65.9
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 7.2e-60 234.6 186 66.7
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 9.4e-60 234.2 180 65.0
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 1.6e-59 233.4 182 65.9
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 2.7e-59 232.6 182 64.3
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 3.6e-59 232.3 129 84.5
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 4.7e-59 231.9 181 67.4
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 8.0e-59 231.1 182 64.3
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 8.0e-59 231.1 182 64.8
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 4.0e-58 228.8 182 69.2
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 6.8e-58 228.0 182 69.2
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 8.8e-58 227.6 180 66.7
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 1.2e-57 227.3 181 64.6
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.2e-57 227.3 182 68.7
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 1.5e-57 226.9 180 66.7
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 1.5e-57 226.9 182 66.5
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 2.0e-57 226.5 182 65.4
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 2.6e-57 226.1 170 66.5
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 3.4e-57 225.7 184 62.5
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 3.4e-57 225.7 179 66.5
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 5.7e-57 224.9 181 66.3
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 8.3e-56 221.1 187 62.6
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 2.4e-55 219.5 146 72.6
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 5.4e-55 218.4 159 66.7
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 1.6e-54 216.9 180 63.9
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 1.6e-54 216.9 187 60.4
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 3.5e-54 215.7 175 61.7
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 3.5e-54 215.7 190 60.0
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 3.5e-54 215.7 187 63.1
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 4.5e-54 215.3 187 62.6
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 4.5e-54 215.3 187 62.6
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 4.5e-54 215.3 190 60.0
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 7.7e-54 214.5 187 62.0
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 7.7e-54 214.5 187 62.0
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 1.0e-53 214.2 187 62.0
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 1.3e-53 213.8 188 62.2
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 2.2e-53 213.0 189 61.4
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 5.0e-53 211.8 157 66.2
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 6.5e-53 211.5 207 53.6
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 8.5e-53 211.1 186 61.8
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 1.1e-52 210.7 186 61.3
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 1.1e-52 210.7 203 58.6
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.9e-52 209.9 187 60.4
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 1.9e-52 209.9 187 60.4
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 1.9e-52 209.9 129 74.4
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 1.9e-52 209.9 174 63.8
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 4.2e-52 208.8 187 61.0
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 4.2e-52 208.8 187 61.0
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 4.2e-52 208.8 122 81.1
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 7.2e-52 208.0 188 62.2
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 9.4e-52 207.6 119 79.8
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 9.4e-52 207.6 118 81.4
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 1.2e-51 207.2 184 62.0
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.8e-50 203.4 188 59.6
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 2.2e-48 196.4 186 60.2
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 8.3e-48 194.5 111 82.0
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 2.7e-46 189.5 118 74.6
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 2.2e-40 169.9 143 58.0
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 2.9e-40 169.5 147 57.8
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 1.1e-39 167.5 184 53.8
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 1.0e-37 161.0 123 63.4
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 1.4e-34 150.6 112 61.6
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 1.2e-33 147.5 138 55.8
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 2.6e-33 146.4 110 63.6
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 1.3e-32 144.1 174 48.3
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 4.9e-32 142.1 124 63.7
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 4.1e-23 112.5 143 42.7
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 2.7e-22 109.8 96 61.5
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 9.5e-20 101.3 100 48.0
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 2.8e-19 99.8 90 52.2
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 1.1e-18 97.8 180 38.9
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 2.3e-13 80.1 99 47.5
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 2.6e-09 66.6 51 74.5
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 1.2e-06 57.8 37 81.1


User provided reference genes

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