Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 1.1e-104 383.3 186 100.0
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 1.9e-93 345.9 186 87.6
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 1.6e-92 342.8 186 87.6
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 1.1e-91 340.1 186 86.6
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.4e-91 339.7 186 86.0
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 1.8e-91 339.3 186 86.6
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 3.1e-91 338.6 186 85.5
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 5.3e-91 337.8 186 84.9
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 5.3e-91 337.8 186 84.9
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 1.5e-90 336.3 186 84.9
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 2.6e-90 335.5 186 82.8
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 3.4e-90 335.1 183 85.8
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 4.5e-90 334.7 186 83.9
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 4.5e-90 334.7 186 83.3
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 7.6e-90 334.0 186 82.8
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 2.2e-89 332.4 186 83.9
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 2.9e-89 332.0 186 84.9
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 3.8e-89 331.6 186 82.8
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 3.8e-89 331.6 186 82.8
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 4.9e-89 331.3 185 82.7
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 6.4e-89 330.9 186 82.3
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 6.4e-89 330.9 186 83.9
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 8.4e-89 330.5 186 83.3
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 8.4e-89 330.5 186 82.3
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 8.4e-89 330.5 186 82.8
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 1.1e-88 330.1 185 82.7
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 1.1e-88 330.1 186 83.3
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 1.4e-88 329.7 186 82.3
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 1.4e-88 329.7 186 82.8
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 1.9e-88 329.3 186 82.8
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.4e-88 328.9 186 81.2
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 5.4e-88 327.8 186 83.3
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 7.1e-88 327.4 186 81.2
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 7.1e-88 327.4 186 81.2
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 9.3e-88 327.0 183 82.0
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 9.3e-88 327.0 186 82.3
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 9.3e-88 327.0 185 82.2
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 9.3e-88 327.0 185 82.7
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 1.6e-87 326.2 182 83.0
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.6e-87 326.2 186 79.6
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.6e-87 326.2 185 81.6
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 2.1e-87 325.9 185 81.6
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 2.1e-87 325.9 183 85.2
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 2.1e-87 325.9 186 80.6
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 2.1e-87 325.9 172 89.5
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 2.7e-87 325.5 183 81.4
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 4.6e-87 324.7 183 81.4
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 4.6e-87 324.7 186 82.8
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 6.0e-87 324.3 186 81.7
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 7.9e-87 323.9 186 81.7
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 7.9e-87 323.9 186 80.6
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 1.0e-86 323.6 186 81.2
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.3e-86 323.2 181 81.2
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 3.0e-86 322.0 186 80.6
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 3.0e-86 322.0 182 81.3
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 3.0e-86 322.0 183 81.4
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 3.0e-86 322.0 186 79.0
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 3.9e-86 321.6 186 79.6
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 3.9e-86 321.6 185 80.0
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 6.7e-86 320.9 183 80.9
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 8.7e-86 320.5 186 79.6
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 8.7e-86 320.5 185 79.5
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 8.7e-86 320.5 186 79.6
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 8.7e-86 320.5 181 80.1
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 8.7e-86 320.5 183 80.9
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 1.1e-85 320.1 186 80.1
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 1.1e-85 320.1 175 86.3
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 1.5e-85 319.7 183 80.3
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.5e-85 319.7 183 80.3
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 1.5e-85 319.7 186 78.5
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 1.9e-85 319.3 185 77.8
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.9e-85 319.3 182 79.7
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 1.9e-85 319.3 182 79.7
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 5.6e-85 317.8 183 80.3
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 5.6e-85 317.8 183 80.3
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 5.6e-85 317.8 183 79.8
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 7.4e-85 317.4 183 79.8
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 7.4e-85 317.4 183 79.8
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 9.6e-85 317.0 183 79.8
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 9.6e-85 317.0 183 79.8
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 1.3e-84 316.6 183 79.8
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 1.6e-84 316.2 183 79.8
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 1.6e-84 316.2 183 79.8
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.1e-84 315.8 183 79.2
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 6.2e-84 314.3 185 78.4
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 8.1e-84 313.9 183 79.8
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 8.1e-84 313.9 183 79.8
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 1.8e-83 312.8 183 78.1
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 1.8e-83 312.8 183 78.1
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 1.8e-83 312.8 183 78.1
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.4e-83 312.4 183 79.2
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 4.0e-83 311.6 183 77.6
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 4.0e-83 311.6 183 78.7
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 4.0e-83 311.6 183 77.6
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 5.3e-83 311.2 183 78.7
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 9.0e-83 310.5 183 77.0
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 1.2e-82 310.1 183 77.6
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 1.2e-82 310.1 186 77.4
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 1.2e-82 310.1 183 77.0
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 1.7e-81 306.2 186 73.7
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 2.2e-81 305.8 181 76.8
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 4.9e-81 304.7 186 78.0
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 1.4e-80 303.1 187 77.0
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 1.9e-80 302.8 183 80.3
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 1.2e-79 300.1 187 76.5
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 1.0e-78 297.0 186 75.8
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 2.3e-78 295.8 186 75.3
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 4.3e-77 291.6 185 73.0
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 9.6e-77 290.4 173 76.9
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 4.8e-76 288.1 186 73.1
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 1.1e-75 287.0 186 73.1
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 2.4e-75 285.8 186 72.0
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 3.4e-74 282.0 183 71.6
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 7.6e-74 280.8 186 71.0
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 1.7e-73 279.6 186 70.4
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 2.9e-73 278.9 186 69.9
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 4.9e-73 278.1 186 69.4
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 1.1e-72 276.9 186 69.4
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 1.9e-72 276.2 186 69.4
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 5.7e-69 264.6 186 63.4
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 1.1e-61 240.4 183 53.6
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 5.0e-57 224.9 181 55.8
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 1.2e-55 220.3 172 63.4
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.2e-55 220.3 187 52.4
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 2.6e-53 212.6 177 50.8
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 3.3e-53 212.2 183 50.3
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 4.1e-51 205.3 187 49.2
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 2.4e-43 179.5 151 54.3
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 9.1e-43 177.6 180 51.1
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 1.1e-35 154.1 89 80.9
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 1.0e-33 147.5 172 47.1
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 5.9e-26 121.7 88 62.5
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 1.2e-21 107.5 54 88.9
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 1.2e-21 107.5 157 33.1
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 2.1e-07 60.1 88 34.1


User provided reference genes

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