Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 1.1e-193 679.9 357 100.0
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 6.7e-103 378.3 357 57.7
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 9.1e-100 367.9 357 57.7
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 3.5e-99 365.9 348 58.0
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 2.5e-97 359.8 361 57.1
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.2e-96 357.5 357 55.7
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 1.6e-96 357.1 324 59.0
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 2.1e-96 356.7 357 55.7
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 4.7e-96 355.5 352 57.7
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 8.0e-96 354.8 356 55.9
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 3.0e-95 352.8 352 57.1
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.0e-94 350.1 357 55.2
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 2.0e-94 350.1 316 59.8
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 3.4e-94 349.4 362 56.9
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 1.4e-92 344.0 357 57.4
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 1.4e-92 344.0 352 55.4
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 2.4e-92 343.2 346 54.9
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 4.1e-92 342.4 360 53.6
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 5.4e-92 342.0 365 55.1
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 2.7e-91 339.7 316 59.2
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.2e-90 336.7 367 53.4
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 8.5e-90 334.7 348 55.7
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 3.2e-89 332.8 354 53.1
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.0e-87 326.2 315 55.9
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 8.8e-87 324.7 315 55.6
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 2.6e-86 323.2 352 51.7
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 7.5e-86 321.6 356 52.5
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.7e-85 320.5 355 50.1
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 1.7e-85 320.5 357 52.4
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.7e-85 319.3 315 54.6
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 3.5e-83 312.8 358 49.2
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 1.9e-81 307.0 374 50.5
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 5.2e-79 298.9 355 49.6
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 3.4e-78 296.2 356 49.7
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 9.8e-78 294.7 355 49.3
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.3e-77 294.3 377 49.1
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 4.9e-77 292.4 357 47.6
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 6.4e-77 292.0 357 49.9
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 4.1e-76 289.3 355 48.7
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 5.4e-76 288.9 358 48.3
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 3.5e-75 286.2 268 60.1
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 7.8e-75 285.0 377 48.5
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 5.0e-74 282.3 360 46.1
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 8.6e-74 281.6 361 47.4
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 5.6e-73 278.9 362 47.2
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 3.6e-72 276.2 319 49.8
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 8.0e-72 275.0 357 46.8
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 8.9e-71 271.6 336 47.3
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 2.2e-69 266.9 352 45.7
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 1.4e-68 264.2 364 46.7
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 7.0e-68 261.9 357 43.7
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 7.0e-68 261.9 355 45.9
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 9.2e-68 261.5 314 51.3
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 3.9e-66 256.1 355 44.2
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.5e-65 254.2 349 45.8
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 1.6e-64 250.8 342 45.3
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 6.2e-64 248.8 277 51.6
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.1e-63 248.1 268 55.2
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.1e-63 248.1 268 55.2
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 1.4e-63 247.7 339 44.5
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 2.3e-63 246.9 326 46.6
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 2.3e-63 246.9 346 44.5
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 6.8e-63 245.4 352 43.8
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 2.9e-61 240.0 318 44.7
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 1.1e-60 238.0 278 48.6
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 1.1e-60 238.0 327 44.3
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 7.1e-60 235.3 328 41.5
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 4.6e-59 232.6 319 44.5
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 4.6e-59 232.6 349 42.1
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 5.1e-58 229.2 315 42.5
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 5.6e-57 225.7 340 44.4
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 3.2e-52 209.9 290 44.8
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 9.2e-52 208.4 215 54.9
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 2.1e-51 207.2 292 42.8
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.7e-51 206.8 346 41.6
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.7e-51 206.8 346 41.6
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.7e-51 206.8 254 47.6
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 6.6e-50 202.2 211 55.5
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 2.5e-49 200.3 275 46.2
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 2.1e-48 197.2 205 57.1
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 6.2e-48 195.7 261 43.7
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 5.2e-47 192.6 302 43.7
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 2.6e-46 190.3 346 36.4
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 8.4e-45 185.3 370 36.8
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 2.1e-43 180.6 346 36.1
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 1.3e-42 177.9 281 41.3
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 2.3e-42 177.2 353 35.7
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 3.0e-42 176.8 338 37.9
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 2.5e-41 173.7 359 35.7
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 2.5e-41 173.7 359 35.7
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 5.6e-41 172.6 359 35.4
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 2.8e-40 170.2 350 36.0
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 3.6e-40 169.9 346 35.8
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 4.8e-40 169.5 348 35.1
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 4.0e-39 166.4 348 34.8
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 9.0e-39 165.2 346 35.0
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 2.6e-38 163.7 354 35.6
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 9.9e-38 161.8 354 35.3
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 1.6e-35 154.5 347 32.9
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 1.6e-35 154.5 150 57.3
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 8.1e-32 142.1 108 65.7
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 2.0e-30 137.5 295 34.6
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 5.8e-30 136.0 236 38.1
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 8.7e-26 122.1 287 33.1
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 8.7e-26 122.1 282 33.3
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 9.6e-25 118.6 282 31.9
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.4e-20 104.8 95 55.8
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 7.1e-20 102.4 315 28.9
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 3.5e-19 100.1 324 27.5
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 2.3e-18 97.4 319 27.9
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 3.9e-18 96.7 293 29.7
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.8e-15 87.8 125 39.2
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.8e-15 87.8 125 39.2
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 1.1e-12 78.6 140 36.4
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 1.6e-11 74.7 83 50.6
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 5.1e-10 69.7 70 48.6
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 4.5e-06 56.6 233 26.2


User provided reference genes

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