Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 3.5e-80 301.6 155 100.0
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 4.9e-34 148.3 92 78.3
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.1e-33 147.1 92 77.2
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.1e-33 147.1 92 77.2
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.9e-33 146.4 92 77.2
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.9e-33 146.4 94 75.5
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 5.4e-33 144.8 92 77.2
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 5.4e-33 144.8 92 77.2
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 5.4e-33 144.8 92 77.2
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.6e-32 143.3 92 76.1
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 4.6e-32 141.7 101 68.3
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 7.9e-32 141.0 92 73.9
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 2.3e-31 139.4 92 72.8
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 3.0e-31 139.0 92 75.0
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 3.9e-31 138.7 93 75.3
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 3.9e-31 138.7 93 74.2
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 3.9e-31 138.7 92 73.9
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 3.9e-31 138.7 92 73.9
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 8.7e-31 137.5 92 71.7
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.1e-30 137.1 92 71.7
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 1.1e-30 137.1 92 72.8
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 1.1e-30 137.1 93 74.2
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 4.3e-30 135.2 92 71.7
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 4.3e-30 135.2 92 71.7
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 7.4e-30 134.4 92 70.7
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 9.6e-30 134.0 92 71.7
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 1.6e-29 133.3 93 72.0
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 2.1e-29 132.9 84 76.2
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 2.8e-29 132.5 93 71.0
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 2.8e-29 132.5 92 68.5
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 2.8e-29 132.5 92 68.5
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 4.8e-29 131.7 92 71.7
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 4.8e-29 131.7 92 69.6
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 4.8e-29 131.7 92 69.6
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 4.8e-29 131.7 92 68.5
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 4.8e-29 131.7 92 68.5
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 6.2e-29 131.3 93 71.0
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 6.2e-29 131.3 92 70.7
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 6.2e-29 131.3 94 68.1
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 8.1e-29 131.0 92 69.6
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 8.1e-29 131.0 92 70.7
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.1e-28 130.6 92 69.6
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 1.4e-28 130.2 92 68.5
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 1.4e-28 130.2 92 69.6
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 1.4e-28 130.2 92 69.6
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.4e-28 129.4 92 67.4
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 2.4e-28 129.4 92 69.6
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 4.0e-28 128.6 96 66.7
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 4.0e-28 128.6 92 69.6
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 5.3e-28 128.3 92 67.4
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 5.3e-28 128.3 93 69.9
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 5.3e-28 128.3 92 67.4
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 5.3e-28 128.3 92 65.2
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 6.9e-28 127.9 92 67.4
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.2e-27 127.1 90 70.0
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.2e-27 127.1 90 70.0
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 1.5e-27 126.7 92 67.4
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 4.5e-27 125.2 80 76.2
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 5.8e-27 124.8 92 67.4
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 5.8e-27 124.8 97 62.9
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 7.6e-27 124.4 89 66.3
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.0e-26 124.0 92 65.2
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.0e-26 124.0 93 65.6
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.3e-26 123.6 97 61.9
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 2.2e-26 122.9 92 63.0
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 2.2e-26 122.9 91 67.0
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 2.2e-26 122.9 94 62.8
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 2.9e-26 122.5 92 66.3
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 3.8e-26 122.1 84 69.0
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 2.5e-25 119.4 88 67.0
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 3.2e-25 119.0 94 62.8
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 4.2e-25 118.6 92 64.1
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 5.5e-25 118.2 85 67.1
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 7.1e-25 117.9 94 66.0
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 2.7e-24 115.9 84 69.0
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 1.0e-23 114.0 84 64.3
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 1.8e-23 113.2 92 62.0
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 3.0e-23 112.5 93 63.4
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 8.7e-23 110.9 92 58.7
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.1e-22 110.5 75 69.3
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 5.7e-22 108.2 93 59.1
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.7e-22 108.2 93 59.1
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.7e-22 108.2 93 59.1
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 1.6e-21 106.7 70 77.1
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.1e-21 106.3 68 73.5
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 6.2e-21 104.8 84 61.9
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 8.2e-21 104.4 93 57.0
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 8.2e-21 104.4 93 58.1
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 4.0e-20 102.1 73 61.6
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 6.9e-20 101.3 92 52.2
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 6.9e-20 101.3 92 52.2
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 6.9e-20 101.3 87 60.9
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 1.5e-19 100.1 92 51.1
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 1.5e-19 100.1 92 51.1
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 1.5e-19 100.1 92 51.1
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 1.5e-19 100.1 92 51.1
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 4.5e-19 98.6 80 60.0
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 5.8e-19 98.2 66 74.2
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.2e-18 96.3 68 64.7
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 3.8e-18 95.5 84 58.3
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 5.0e-18 95.1 82 57.3
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.4e-17 93.6 85 54.1
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 2.1e-16 89.7 92 45.7
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.3e-15 87.0 67 65.7
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 1.5e-14 83.6 82 57.3
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 1.8e-12 76.6 67 55.2
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.0e-10 68.6 93 43.0
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 6.5e-10 68.2 50 62.0
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 7.9e-08 61.2 97 42.3
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 1.8e-07 60.1 98 40.8
ECA236G1637 Erigeron canadensis HOM05D000015 ORTHO05D009146 2.3e-07 59.7 101 38.6
PSO541G1228 Papaver somniferum HOM05D000015 ORTHO05D009146 3.9e-07 58.9 134 32.8
Manes.17G027600 Manihot esculenta HOM05D000015 ORTHO05D009146 1.5e-06 57.0 95 37.9
GSVIVG01004808001 Vitis vinifera HOM05D000015 ORTHO05D009146 2.5e-06 56.2 98 39.8
CiPaw.10G074200 Carya illinoinensis HOM05D000015 ORTHO05D009146 5.7e-06 55.1 100 36.0
QL03p004924 Quercus lobata HOM05D000015 ORTHO05D009146 5.7e-06 55.1 98 37.8
QL05p071991 Quercus lobata HOM05D000015 ORTHO05D009146 5.7e-06 55.1 98 37.8
Sabra11G0008100 Salix brachista HOM05D000015 ORTHO05D009146 7.4e-06 54.7 103 35.0


User provided reference genes

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