Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.5e-175 619.4 312 100.0
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 9.7e-122 440.7 286 80.1
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 1.3e-73 280.8 327 49.8
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 6.4e-73 278.5 317 48.9
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 3.5e-71 272.7 319 49.2
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 3.0e-70 269.6 319 48.9
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 1.1e-69 267.7 317 48.3
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 1.4e-67 260.8 334 45.2
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 2.6e-66 256.5 320 48.4
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.7e-65 253.8 319 46.4
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 3.7e-65 252.7 316 46.2
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.4e-64 250.0 319 45.8
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 3.2e-64 249.6 316 45.6
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 5.4e-64 248.8 314 48.1
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 1.2e-63 247.7 340 46.2
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 3.5e-63 246.1 321 48.0
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 2.3e-62 243.4 320 44.7
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 3.0e-62 243.0 317 45.4
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 6.6e-62 241.9 319 47.0
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 6.6e-62 241.9 319 46.1
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 7.3e-61 238.4 320 47.2
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 9.5e-61 238.0 255 48.6
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.6e-60 237.3 320 47.2
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 1.6e-60 237.3 319 45.1
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 3.1e-59 233.0 314 47.1
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 1.5e-58 230.7 334 43.1
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 3.4e-58 229.6 320 46.6
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 5.8e-58 228.8 319 43.9
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.9e-57 225.7 314 43.6
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 4.9e-57 225.7 321 45.8
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 9.5e-53 211.5 324 41.0
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 2.8e-52 209.9 255 47.5
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 4.7e-52 209.1 312 42.9
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 1.8e-51 207.2 309 40.1
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 4.0e-51 206.1 320 40.6
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 2.4e-48 196.8 323 41.5
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 5.4e-48 195.7 325 43.1
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 1.6e-47 194.1 313 39.3
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 2.3e-46 190.3 314 39.2
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 3.9e-46 189.5 332 38.0
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 3.9e-46 189.5 332 38.0
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 5.1e-46 189.1 316 38.6
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 6.6e-46 188.7 313 39.0
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 8.6e-46 188.3 315 41.9
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 2.5e-45 186.8 326 41.7
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 2.1e-44 183.7 285 42.1
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 2.1e-44 183.7 319 36.7
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 1.4e-43 181.0 251 46.6
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 7.6e-42 175.3 303 39.6
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 1.3e-41 174.5 328 39.6
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 2.9e-41 173.3 310 42.3
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 4.9e-41 172.6 347 37.8
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 4.9e-41 172.6 328 39.9
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 8.4e-41 171.8 312 38.1
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 2.4e-40 170.2 316 38.6
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 5.4e-40 169.1 316 38.6
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 9.3e-40 168.3 317 38.2
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 1.3e-38 164.5 307 38.4
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 1.7e-38 164.1 293 36.5
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 2.3e-38 163.7 305 36.1
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 5.1e-38 162.5 315 39.7
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 1.5e-37 161.0 272 39.7
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 2.5e-37 160.2 320 35.9
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 3.3e-37 159.8 301 35.9
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 5.6e-37 159.1 320 36.2
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 1.6e-36 157.5 300 35.7
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 2.8e-36 156.8 359 35.1
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 2.4e-35 153.7 314 35.4
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 2.2e-33 147.1 325 34.5
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 7.1e-32 142.1 317 35.3
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 1.6e-31 141.0 327 37.9
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 2.7e-31 140.2 327 34.6
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 1.3e-30 137.9 354 33.6
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 2.3e-30 137.1 252 40.1
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 3.0e-30 136.7 312 35.6
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 5.1e-30 136.0 345 33.9
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 1.9e-29 134.0 308 34.7
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 9.6e-29 131.7 317 34.7
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 1.4e-27 127.9 241 38.2
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 1.8e-27 127.5 315 34.3
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 5.1e-22 109.4 339 29.5
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 6.7e-22 109.0 208 37.5
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 6.7e-22 109.0 342 29.8
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 2.4e-19 100.5 273 33.3
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 4.0e-19 99.8 304 32.2
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 9.0e-19 98.6 342 32.7
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 3.8e-17 93.2 326 31.0
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 4.9e-17 92.8 162 34.6
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 2.1e-15 87.4 337 27.6
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 7.9e-15 85.5 291 30.9
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 3.0e-14 83.6 323 27.9
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 1.9e-13 80.9 155 39.4
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 8.5e-09 65.5 82 50.0
Aqoxy1G00983 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 9.3e-08 62.0 184 28.8
ATR0829G194 Amborella trichopoda HOM05D007538 ORTHO05D009464 2.7e-07 60.5 50 56.0
SHI07413 Sapria himalayana HOM05D007538 ORTHO05D009464 6.7e-06 55.8 109 35.8


User provided reference genes

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