Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G0847 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 0.0e+00 2010.3 1096 100.0
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 3.3e-116 424.1 1325 31.5
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 6.9e-114 416.4 1335 31.5
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 2.7e-110 404.4 1324 31.0
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 2.7e-86 324.7 1318 29.1
Atru.chr9.2147 Acer truncatum HOM05D006627 ORTHO05D007753 2.5e-84 318.2 915 33.8
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 4.1e-82 310.8 1201 29.1
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 1.6e-78 298.9 1166 28.2
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 6.1e-70 270.4 1424 26.1
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 4.5e-65 254.2 1432 25.5
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 2.1e-62 245.4 1280 27.3
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 2.4e-58 231.9 1319 25.9
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 2.7e-54 218.4 1416 24.9
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 2.6e-52 211.8 1399 25.2
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 6.5e-48 197.2 1249 25.2
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 1.2e-44 186.4 1250 24.1
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 2.8e-43 181.8 1216 25.3
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 3.1e-42 178.3 1303 22.9
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 5.4e-42 177.6 1126 26.0
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 2.9e-40 171.8 1246 24.6
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 6.6e-40 170.6 1244 24.0
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 6.6e-40 170.6 1213 24.2
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 1.2e-38 166.4 1242 25.2
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 2.8e-38 165.2 1184 25.0
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 2.0e-36 159.1 1147 25.5
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 2.9e-35 155.2 1188 26.1
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 2.5e-31 142.1 781 25.5
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 1.2e-30 139.8 1357 23.6
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 6.2e-30 137.5 324 34.3
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 6.0e-25 120.9 1099 24.1
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 1.7e-24 119.4 1146 25.3
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 2.5e-23 115.5 1162 25.1
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 4.3e-23 114.8 1041 25.5
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 4.3e-23 114.8 1179 23.3
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 4.3e-23 114.8 1187 23.8
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 2.8e-22 112.1 1155 24.4
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 1.1e-21 110.2 930 24.6
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 1.1e-21 110.2 930 24.6
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 3.4e-20 105.1 1044 25.7
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 5.8e-20 104.4 1197 24.0
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 7.5e-20 104.0 1049 25.4
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 5.4e-18 97.8 1148 23.9
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 1.2e-17 96.7 335 29.6
Atru.chr9.2148 Acer truncatum HOM05D006627 ORTHO05D007753 2.7e-17 95.5 139 42.4
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 2.3e-16 92.4 1181 25.1
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 3.0e-16 92.0 1033 24.3
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 3.0e-16 92.0 1221 22.9
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 3.9e-16 91.7 1117 23.5
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 2.5e-15 89.0 279 32.3
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 4.3e-15 88.2 261 33.3
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 5.6e-15 87.8 327 30.3
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 7.3e-15 87.4 327 30.3
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.1e-14 85.9 273 32.6
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.8e-14 85.5 327 30.3
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.6e-14 85.1 279 31.9
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 3.6e-14 85.1 276 31.9
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 8.1e-14 84.0 265 33.2
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.3e-13 82.4 275 32.4
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.1e-13 82.0 275 32.4
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 3.1e-13 82.0 302 28.1
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 3.1e-13 82.0 913 23.3
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 5.2e-13 81.3 362 29.3
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 1.2e-12 80.1 264 29.9
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 1.2e-12 80.1 384 26.3
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 1.5e-12 79.7 1117 22.8
CDE04G0350 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 2.0e-12 79.3 305 26.6
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 5.8e-12 77.8 1026 24.1
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 6.4e-11 74.3 619 26.7
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 8.4e-11 73.9 1056 23.4
CDE07G1237 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 1.1e-10 73.6 292 26.0
Os08g0430000 Oryza sativa ssp. japonica HOM05D006627 ORTHO05D007753 5.4e-10 71.2 316 29.1
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 9.2e-10 70.5 286 26.9
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 1.6e-09 69.7 286 29.0
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 2.1e-09 69.3 286 26.9
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 2.1e-09 69.3 286 26.9
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 4.6e-09 68.2 339 28.3
BcaC07g38204 Brassica carinata HOM05D008661 ORTHO05D010872 1.3e-08 66.6 300 28.7
BolC8t48627H Brassica oleracea HOM05D008661 ORTHO05D010872 1.3e-08 66.6 300 28.7
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 1.3e-08 66.6 997 23.6
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 1.3e-08 66.6 340 27.6
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 2.3e-08 65.9 310 26.1
C08p09590 Brassica napus HOM05D008661 ORTHO05D010872 3.0e-08 65.5 300 29.0
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 8.6e-08 63.9 265 28.7
A08p21040 Brassica napus HOM05D008661 ORTHO05D010872 1.1e-07 63.5 300 29.0
BraA08t34056Z Brassica rapa HOM05D008661 ORTHO05D010872 1.1e-07 63.5 300 29.0
CARHR233080 Cardamine hirsuta HOM05D008661 ORTHO05D010872 1.5e-07 63.2 349 28.4
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 2.5e-07 62.4 322 24.5
A08p21060 Brassica napus HOM05D008661 ORTHO05D010872 3.3e-07 62.0 300 28.3
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 4.3e-07 61.6 266 27.1
AL7G27440 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 1.6e-06 59.7 287 27.9
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 1.6e-06 59.7 649 23.6
AL8G26990 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 4.7e-06 58.2 162 31.5
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 4.7e-06 58.2 317 27.4
Dinv35244 Davidia involucrata HOM05D006627 ORTHO05D007753 6.2e-06 57.8 201 28.9


User provided reference genes

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