Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 1.5e-228 795.8 406 100.0
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 2.1e-161 572.8 406 73.6
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 2.6e-159 565.8 405 72.8
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 6.4e-158 561.2 407 71.7
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 3.9e-155 552.0 410 70.2
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 3.9e-155 552.0 407 70.0
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 2.5e-154 549.3 405 68.9
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 4.0e-152 542.0 403 70.2
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 6.8e-152 541.2 407 69.8
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 2.6e-151 539.3 408 67.4
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 2.6e-151 539.3 410 68.3
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 4.4e-151 538.5 407 69.8
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 1.3e-150 537.0 409 67.7
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 8.4e-150 534.3 409 68.5
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 7.1e-149 531.2 405 70.6
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 9.2e-149 530.8 405 69.1
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 3.5e-148 528.9 440 65.0
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 7.8e-148 527.7 409 69.2
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 7.8e-148 527.7 407 68.8
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 1.3e-147 526.9 412 68.7
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 1.5e-146 523.5 407 68.3
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 1.2e-145 520.4 410 67.8
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 2.1e-145 519.6 413 67.8
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 4.7e-145 518.5 407 66.8
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 3.1e-144 515.8 399 67.7
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 5.2e-144 515.0 406 66.0
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 6.9e-144 514.6 386 71.2
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 9.0e-144 514.2 389 68.6
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 9.0e-144 514.2 376 69.9
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 7.6e-143 511.1 404 66.3
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 9.9e-143 510.8 401 68.3
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 8.4e-142 507.7 408 66.4
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 1.4e-141 506.9 408 66.7
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 2.4e-141 506.1 393 66.9
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 4.2e-141 505.4 438 63.0
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 9.3e-141 504.2 396 65.9
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 1.2e-140 503.8 401 65.1
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 2.7e-140 502.7 401 64.8
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 4.6e-140 501.9 411 65.7
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 6.0e-140 501.5 406 65.5
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 8.7e-139 497.7 406 64.0
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 4.3e-138 495.4 414 65.0
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 9.6e-138 494.2 411 65.7
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 2.4e-136 489.6 401 65.1
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 4.0e-136 488.8 396 65.9
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 5.3e-136 488.4 394 65.2
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 2.6e-135 486.1 399 65.4
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 4.5e-135 485.3 356 71.9
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 7.6e-135 484.6 393 64.1
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 2.1e-132 476.5 404 60.9
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 4.6e-132 475.3 401 64.1
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 7.9e-132 474.6 393 64.1
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 1.0e-131 474.2 404 62.1
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 5.1e-131 471.9 419 60.6
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 8.7e-131 471.1 400 63.5
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 2.5e-130 469.5 418 61.0
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 1.3e-129 467.2 400 64.0
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 1.6e-129 466.8 400 63.5
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 3.7e-129 465.7 367 67.0
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 4.8e-129 465.3 404 63.1
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 4.8e-129 465.3 401 60.8
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 8.1e-129 464.5 397 62.7
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 1.1e-128 464.2 402 61.7
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 1.8e-128 463.4 399 63.7
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 2.4e-128 463.0 400 62.2
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 4.0e-128 462.2 397 63.7
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 9.0e-128 461.1 399 63.2
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 1.2e-127 460.7 391 63.7
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 1.2e-127 460.7 357 68.6
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 7.6e-127 458.0 399 63.9
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 7.6e-127 458.0 399 63.9
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 1.3e-126 457.2 395 62.8
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 2.2e-126 456.4 480 55.6
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 1.4e-125 453.8 399 62.7
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 1.4e-125 453.8 399 62.7
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 1.4e-125 453.8 404 60.9
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 2.4e-125 453.0 392 63.5
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 3.2e-125 452.6 417 59.2
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 5.5e-125 451.8 403 59.3
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 5.5e-125 451.8 403 59.6
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 5.5e-125 451.8 417 59.2
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 2.7e-124 449.5 402 61.2
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 1.3e-123 447.2 389 62.7
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 1.3e-123 447.2 402 60.0
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 3.0e-123 446.0 370 64.9
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 1.5e-122 443.7 373 63.8
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 2.5e-122 443.0 392 63.3
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 2.5e-122 443.0 397 59.9
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 3.3e-122 442.6 400 59.8
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 9.6e-122 441.0 395 60.8
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 1.6e-121 440.3 395 60.5
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 1.1e-120 437.6 366 66.1
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 1.5e-119 433.7 404 57.2
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 1.1e-117 427.6 406 56.9
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 4.6e-116 422.2 394 58.1
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 4.6e-116 422.2 391 57.8
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 4.8e-113 412.1 394 57.4
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 6.5e-110 401.7 427 53.6
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 8.5e-110 401.4 353 62.6
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 3.6e-108 396.0 317 68.8
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 4.8e-105 385.6 436 51.4
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 2.5e-93 346.7 263 70.0
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 4.0e-83 312.8 313 54.0
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 1.2e-79 301.2 410 44.9
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 6.5e-78 295.4 348 49.4
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 1.0e-75 288.1 393 45.8
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 1.5e-74 284.3 406 42.9
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 1.5e-74 284.3 406 42.9
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 2.6e-66 256.9 157 82.2
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 7.3e-37 159.1 127 64.6
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 7.3e-37 159.1 383 33.2
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 2.8e-36 157.1 125 67.2
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 1.3e-30 138.3 139 53.2
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 2.3e-30 137.5 327 31.2
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 1.4e-19 101.7 114 50.0
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 7.6e-18 95.9 190 35.3
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 8.4e-17 92.4 146 39.0
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 1.2e-15 88.6 50 82.0
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 5.1e-14 83.2 50 74.0
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 5.1e-14 83.2 50 74.0
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 1.1e-13 82.0 52 75.0
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 5.3e-11 73.2 170 38.2
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 4.9e-09 66.6 45 66.7
Cfa027053 Carpinus fangiana HOM05D006541 ORTHO05D124901 3.2e-08 63.9 411 25.1
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.8e-06 58.2 100 43.0


User provided reference genes

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