Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G0712 Tripterygium wilfordii HOM05D004041 ORTHO05D004564 4.8e-94 347.8 176 100.0
TWI15G0012 Tripterygium wilfordii HOM05D004041 ORTHO05D004564 1.8e-77 292.7 169 88.8
Manes.03G046500 Manihot esculenta HOM05D004041 ORTHO05D004564 1.6e-57 226.5 166 69.9
PGR119G2538 Punica granatum HOM05D004041 ORTHO05D004564 4.7e-57 224.9 170 69.4
GSVIVG01035595001 Vitis vinifera HOM05D004041 ORTHO05D004564 8.0e-57 224.2 171 70.8
Lj8C419G2 Lonicera japonica HOM05D004041 ORTHO05D004564 5.2e-56 221.5 148 77.7
arahy.Tifrunner.gnm1.ann1.1H4CIU Arachis hypogaea HOM05D004041 ORTHO05D004564 8.9e-56 220.7 177 66.7
CiPaw.07G050600 Carya illinoinensis HOM05D004041 ORTHO05D004564 1.2e-55 220.3 161 70.8
Glyma.14G131900 Glycine max HOM05D004041 ORTHO05D004564 2.0e-55 219.5 167 68.3
Atru.chr4.1391 Acer truncatum HOM05D004041 ORTHO05D004564 2.2e-54 216.1 153 71.9
Eucgr.H02470 Eucalyptus grandis HOM05D004041 ORTHO05D004564 2.9e-54 215.7 161 69.6
Glyma.17G200600 Glycine max HOM05D004041 ORTHO05D004564 4.9e-54 214.9 152 72.4
MD15G1111100 Malus domestica HOM05D004041 ORTHO05D004564 4.9e-54 214.9 172 65.7
Prupe.1G463200 Prunus persica HOM05D004041 ORTHO05D004564 1.8e-53 213.0 160 68.8
Lj1g0018267 Lotus japonicus HOM05D004041 ORTHO05D004564 2.4e-53 212.6 154 75.3
Potri.006G233000 Populus trichocarpa HOM05D004041 ORTHO05D004564 2.4e-53 212.6 168 69.6
Sabra06G0181500 Salix brachista HOM05D004041 ORTHO05D004564 9.2e-53 210.7 168 69.0
VMungo1383G3608 Vigna mungo HOM05D004041 ORTHO05D004564 1.2e-52 210.3 157 69.4
Actinidia12476 Actinidia chinensis HOM05D004041 ORTHO05D004564 3.5e-52 208.8 169 66.3
Sed0021561 Sechium edule HOM05D004041 ORTHO05D004564 4.6e-52 208.4 177 62.1
CiPaw.07G215400 Carya illinoinensis HOM05D004041 ORTHO05D004564 7.8e-52 207.6 161 66.5
Phvul.001G088700 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 3.0e-51 205.7 152 69.7
CsaV3_2G031560 Cucumis sativus L. HOM05D004041 ORTHO05D004564 5.0e-51 204.9 177 62.1
MD08G1133100 Malus domestica HOM05D004041 ORTHO05D004564 6.6e-51 204.5 169 63.3
DCAR_004521 Daucus carota HOM05D004041 ORTHO05D004564 8.6e-51 204.1 169 64.5
FAN15G2764 Fragaria x ananassa HOM05D004041 ORTHO05D004564 1.5e-50 203.4 167 65.3
FAN27G0182 Fragaria x ananassa HOM05D004041 ORTHO05D004564 1.5e-50 203.4 167 65.3
Hund03240 Selenicereus undatus HOM05D004041 ORTHO05D004564 1.9e-50 203.0 171 62.0
ClCG08G012810 Citrullus lanatus HOM05D004041 ORTHO05D004564 2.5e-50 202.6 160 66.9
Lsat_1_v5_gn_4_74560 Lactuca sativa HOM05D004041 ORTHO05D004564 2.5e-50 202.6 147 71.4
Ciclev10007432m.g Citrus clementina HOM05D004041 ORTHO05D004564 3.3e-50 202.2 168 65.5
FAN20G2913 Fragaria x ananassa HOM05D004041 ORTHO05D004564 3.3e-50 202.2 167 65.3
FvH4_2g30620 Fragaria vesca HOM05D004041 ORTHO05D004564 4.3e-50 201.8 167 64.7
FAN24G0669 Fragaria x ananassa HOM05D004041 ORTHO05D004564 4.3e-50 201.8 167 64.7
HanXRQChr10g0299041 Helianthus annuus HOM05D004041 ORTHO05D004564 4.3e-50 201.8 147 70.7
Psat6g031640 Pisum sativum HOM05D004041 ORTHO05D004564 1.2e-49 200.3 169 65.1
Phvul.006G038688 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 2.1e-49 199.5 152 69.7
Lalb_Chr11g0064071 Lupinus albus HOM05D004041 ORTHO05D004564 4.7e-49 198.4 167 65.3
Peaxi162Scf00213g01515 Petunia axillaris HOM05D004041 ORTHO05D004564 2.3e-48 196.1 148 70.9
Sc06g0000040 Simmondsia chinensis HOM05D004041 ORTHO05D004564 2.3e-48 196.1 175 61.7
Sc06g0001360 Simmondsia chinensis HOM05D004041 ORTHO05D004564 2.3e-48 196.1 175 61.7
Ca_12887_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 3.1e-48 195.7 160 66.9
RcHm_v2.0_Chr6g0312381 Rosa chinensis HOM05D004041 ORTHO05D004564 4.0e-48 195.3 168 61.9
CSS0017741 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 5.2e-48 194.9 169 63.3
SalBow8G3032 Salvia bowleyana HOM05D004041 ORTHO05D004564 2.6e-47 192.6 163 66.3
Migut.E01401 Erythranthe guttata HOM05D004041 ORTHO05D004564 9.8e-47 190.7 168 62.5
EL10Ac2g03659 Beta vulgaris HOM05D004041 ORTHO05D004564 1.3e-46 190.3 170 61.2
TAR383G1094 Trochodendron aralioides HOM05D004041 ORTHO05D004564 1.7e-46 189.9 171 64.3
Lalb_Chr23g0268921 Lupinus albus HOM05D004041 ORTHO05D004564 2.2e-46 189.5 173 61.8
Nitab4.5_0000288g0130 Nicotiana tabacum HOM05D004041 ORTHO05D004564 2.2e-46 189.5 170 63.5
QL12p024601 Quercus lobata HOM05D004041 ORTHO05D004564 2.2e-46 189.5 165 61.2
Aa31LG4G18100 Aethionema arabicum HOM05D004041 ORTHO05D004564 6.4e-46 188.0 153 66.0
Nitab4.5_0008752g0030 Nicotiana tabacum HOM05D004041 ORTHO05D004564 2.4e-45 186.0 168 62.5
THA.LOC104799001 Tarenaya hassleriana HOM05D004041 ORTHO05D004564 2.4e-45 186.0 163 63.8
Cc03_g09420 Coffea canephora HOM05D004041 ORTHO05D004564 3.2e-45 185.7 149 67.8
Thhalv10010217m.g Eutrema salsugineum HOM05D004041 ORTHO05D004564 4.1e-45 185.3 164 61.6
BcaC07g39425 Brassica carinata HOM05D004041 ORTHO05D004564 5.4e-45 184.9 181 59.7
C08p24610 Brassica napus HOM05D004041 ORTHO05D004564 5.4e-45 184.9 181 59.7
BolC8t50077H Brassica oleracea HOM05D004041 ORTHO05D004564 5.4e-45 184.9 181 59.7
Gohir.A06G171600 Gossypium hirsutum HOM05D004041 ORTHO05D004564 1.6e-44 183.3 156 64.7
Gorai.010G210300 Gossypium raimondii HOM05D004041 ORTHO05D004564 1.6e-44 183.3 156 64.1
AUR62020692 Chenopodium quinoa HOM05D004041 ORTHO05D004564 2.0e-44 183.0 147 67.3
Gohir.D06G179700 Gossypium hirsutum HOM05D004041 ORTHO05D004564 2.0e-44 183.0 156 63.5
Solyc08g074440.4 Solanum lycopersicum HOM05D004041 ORTHO05D004564 7.8e-44 181.0 169 62.1
AL5G29450 Arabidopsis lyrata HOM05D004041 ORTHO05D004564 1.3e-43 180.3 146 66.4
Duzib128G1534 Durio zibethinus HOM05D004041 ORTHO05D004564 1.3e-43 180.3 155 63.9
Duzib106G1246 Durio zibethinus HOM05D004041 ORTHO05D004564 3.0e-43 179.1 165 60.6
CAN.G195.14 Capsicum annuum HOM05D004041 ORTHO05D004564 3.9e-43 178.7 147 67.3
Lj8C415T2 Lonicera japonica HOM05D004041 ORTHO05D004564 5.0e-43 178.3 120 77.5
PGSC0003DMG401029567 Solanum tuberosum HOM05D004041 ORTHO05D004564 5.0e-43 178.3 169 60.9
Thecc.10G128100 Theobroma cacao HOM05D004041 ORTHO05D004564 5.0e-43 178.3 156 62.8
Sp5g12500 Schrenkiella parvula HOM05D004041 ORTHO05D004564 6.6e-43 177.9 147 66.7
Thecc.10G127600 Theobroma cacao HOM05D004041 ORTHO05D004564 1.1e-42 177.2 157 63.7
BcaB01g00690 Brassica carinata HOM05D004041 ORTHO05D004564 1.5e-42 176.8 181 58.0
AUR62028033 Chenopodium quinoa HOM05D004041 ORTHO05D004564 2.5e-42 176.0 147 64.6
BraA06t24900Z Brassica rapa HOM05D004041 ORTHO05D004564 3.3e-42 175.6 181 57.5
ECA234G4028 Erigeron canadensis HOM05D004041 ORTHO05D004564 3.3e-42 175.6 169 56.8
Sopen08g023080 Solanum pennellii HOM05D004041 ORTHO05D004564 4.3e-42 175.3 168 60.7
COL.COLO4_09287 Corchorus olitorius HOM05D004041 ORTHO05D004564 5.6e-42 174.9 175 57.1
CARHR158630 Cardamine hirsuta HOM05D004041 ORTHO05D004564 7.3e-42 174.5 146 63.0
MBI11_g09070_MAGBIO Magnolia biondii HOM05D004041 ORTHO05D004564 7.3e-42 174.5 169 59.8
A06p18110 Brassica napus HOM05D004041 ORTHO05D004564 1.2e-41 173.7 153 63.4
Thecc.10G128300 Theobroma cacao HOM05D004041 ORTHO05D004564 3.6e-41 172.2 156 60.9
Glyma.11G174282 Glycine max HOM05D004041 ORTHO05D004564 4.7e-41 171.8 132 66.7
PSO210G2134 Papaver somniferum HOM05D004041 ORTHO05D004564 4.7e-41 171.8 149 64.4
Gohir.D06G179400 Gossypium hirsutum HOM05D004041 ORTHO05D004564 8.1e-41 171.0 156 61.5
PSO541G4756 Papaver somniferum HOM05D004041 ORTHO05D004564 1.4e-40 170.2 180 57.8
Aqoxy7G02570 Aquilegia oxysepala HOM05D004041 ORTHO05D004564 2.3e-40 169.5 171 56.1
AT3G49601 Arabidopsis thaliana HOM05D004041 ORTHO05D004564 2.3e-40 169.5 146 62.3
SGA_v2.0_scaffold121G33039 Striga asiatica HOM05D003985 ORTHO05D005253 4.0e-40 168.7 153 60.8
Gorai.010G210000 Gossypium raimondii HOM05D004041 ORTHO05D004564 1.5e-39 166.8 156 60.3
Ah.10g033610 Amaranthus hybridus HOM05D004041 ORTHO05D004564 4.4e-39 165.2 146 61.0
Nitab4.5_0000648g0040 Nicotiana tabacum HOM05D004041 ORTHO05D004564 9.9e-39 164.1 158 60.1
PSO832G4585 Papaver somniferum HOM05D004041 ORTHO05D004564 1.3e-38 163.7 146 61.0
vmacro00640 Vaccinium macrocarpon HOM05D004041 ORTHO05D004564 3.7e-38 162.2 114 68.4
ATR0665G601 Amborella trichopoda HOM05D004041 ORTHO05D004564 6.4e-38 161.4 149 60.4
Cpa.g.sc117.15 Carica papaya HOM05D004041 ORTHO05D004564 8.3e-38 161.0 115 69.6
TPR.G10377 Trifolium pratense HOM05D004041 ORTHO05D004564 1.4e-37 160.2 102 78.4
Oeu026036.1 Olea europaea HOM05D004041 ORTHO05D004564 4.1e-37 158.7 119 67.2
TPR.G20436 Trifolium pratense HOM05D004041 ORTHO05D004564 4.1e-37 158.7 102 77.5
Medtr1g010100 Medicago truncatula HOM05D004041 ORTHO05D004564 5.4e-37 158.3 102 77.5
CDE07G1163 Ceratophyllum demersum HOM05D004041 ORTHO05D004564 1.2e-36 157.1 170 52.4
THA.LOC109116738 Tarenaya hassleriana HOM05D004041 ORTHO05D004564 7.8e-36 154.5 133 63.2
Pp3c3_10000 Physcomitrium patens HOM05D004041 ORTHO05D004564 1.3e-35 153.7 145 56.6
SEGI_30814 Sequoiadendron giganteum HOM05D004041 ORTHO05D004564 3.0e-35 152.5 145 56.6
CSS0020148 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 3.9e-35 152.1 103 72.8
CBR_g88579 Chara braunii HOM05D004041 ORTHO05D004564 6.6e-35 151.4 145 53.8
Nn5g27656 Nelumbo nucifera HOM05D004041 ORTHO05D004564 1.9e-34 149.8 113 71.7
Mapoly0057s0059 Marchantia polymorpha HOM05D004041 ORTHO05D004564 2.1e-33 146.4 145 53.1
AagrBONN_evm.TU.Sc2ySwM_344.5195 Anthoceros agrestis HOM05D004041 ORTHO05D004564 3.6e-33 145.6 145 54.5
BcaC09g49964 Brassica carinata HOM05D004041 ORTHO05D004564 8.9e-32 141.0 137 59.9
Gohir.A06G171302 Gossypium hirsutum HOM05D004041 ORTHO05D004564 2.6e-31 139.4 135 59.3
Zm00001eb344480 Zea mays HOM05D004041 ORTHO05D004564 7.6e-31 137.9 171 46.8
CANSAT21G2467 Cannabis sativa HOM05D004041 ORTHO05D004564 9.9e-31 137.5 124 62.1
Dinv09449 Davidia involucrata HOM05D003985 ORTHO05D005253 4.9e-30 135.2 123 66.7
TPR.G211 Trifolium pratense HOM05D004041 ORTHO05D004564 1.1e-29 134.0 89 75.3
Carub.0005s1594 Capsella rubella HOM05D004041 ORTHO05D004564 3.2e-29 132.5 145 53.8
C01p30700 Brassica napus HOM05D004041 ORTHO05D004564 9.2e-29 131.0 144 54.9
RcHm_v2.0_Chr4g0410401 Rosa chinensis HOM05D004041 ORTHO05D004564 1.6e-28 130.2 90 70.0
TAR626G0117 Trochodendron aralioides HOM05D002987 ORTHO05D003359 2.1e-28 129.8 96 68.8
Dinv37476 Davidia involucrata HOM05D000079 ORTHO05D000211 1.3e-27 127.1 123 61.8
Migut.A00845 Erythranthe guttata HOM05D004041 ORTHO05D004564 1.9e-26 123.2 147 51.0
Migut.A00847 Erythranthe guttata HOM05D004041 ORTHO05D004564 1.9e-26 123.2 147 51.0
Zm00001eb204710 Zea mays HOM05D004041 ORTHO05D004564 3.3e-26 122.5 193 40.4
Nn8g41252 Nelumbo nucifera HOM05D004041 ORTHO05D004564 4.7e-25 118.6 81 74.1
Cpa.g.c48129 Carica papaya HOM05D004041 ORTHO05D004564 6.2e-25 118.2 80 71.2
ATR0665G238 Amborella trichopoda HOM05D004041 ORTHO05D004564 4.0e-24 115.5 109 56.9
Ah.11g044190 Amaranthus hybridus HOM05D004041 ORTHO05D004564 5.2e-24 115.2 118 54.2
Gohir.D06G179300 Gossypium hirsutum HOM05D004041 ORTHO05D004564 7.6e-23 111.3 107 57.9
Ca_11409_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 1.3e-22 110.5 104 61.5
Ca_11411_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 4.9e-22 108.6 104 60.6
Mapoly0057s0051 Marchantia polymorpha HOM05D004041 ORTHO05D004564 4.9e-22 108.6 124 48.4
BolC3t18797H Brassica oleracea HOM05D004041 ORTHO05D004564 5.4e-21 105.1 112 54.5
Rhsim07G0241300 Rhododendron simsii HOM05D004041 ORTHO05D004564 7.1e-21 104.8 103 57.3
Haze_21676 Corylus avellana HOM05D063909 ORTHO05D004564 2.1e-20 103.2 84 67.9
Mapoly0018s0007 Marchantia polymorpha HOM05D004041 ORTHO05D004564 6.0e-20 101.7 106 49.1
Zm00001eb204800 Zea mays HOM05D004041 ORTHO05D004564 6.0e-20 101.7 108 50.0
Zm00001eb204730 Zea mays HOM05D004041 ORTHO05D004564 1.0e-19 100.9 105 51.4
SalBow7G2142 Salvia bowleyana HOM05D004041 ORTHO05D004564 1.3e-19 100.5 102 51.0
RhsimUnG0236200 Rhododendron simsii HOM05D004041 ORTHO05D004564 1.7e-19 100.1 103 55.3
Zm00001eb204790 Zea mays HOM05D004041 ORTHO05D004564 3.9e-19 99.0 109 49.5
MCO09G628 Micromonas commoda HOM05D004041 ORTHO05D004564 5.1e-19 98.6 170 38.2
Zm00001eb204810 Zea mays HOM05D004041 ORTHO05D004564 1.1e-18 97.4 104 50.0
Zm00001eb204820 Zea mays HOM05D004041 ORTHO05D004564 1.1e-18 97.4 105 49.5
Gorai.010G209300 Gossypium raimondii HOM05D004041 ORTHO05D004564 1.9e-18 96.7 100 55.0
Gorai.010G209900 Gossypium raimondii HOM05D004041 ORTHO05D004564 2.5e-18 96.3 107 53.3
Zm00001eb204750 Zea mays HOM05D004041 ORTHO05D004564 4.3e-18 95.5 101 50.5
Zm00001eb204770 Zea mays HOM05D004041 ORTHO05D004564 5.6e-18 95.1 107 47.7
Zm00001eb204830 Zea mays HOM05D004041 ORTHO05D004564 9.6e-18 94.4 109 46.8
Manes.07G111004 Manihot esculenta HOM05D004041 ORTHO05D004564 2.8e-17 92.8 103 44.7
Dinv19111 Davidia involucrata HOM05D004041 ORTHO05D004564 4.5e-15 85.5 66 72.7
TPR.G14045 Trifolium pratense HOM05D004041 ORTHO05D004564 1.3e-14 84.0 52 76.9
Cre09.g409200 Chlamydomonas reinhardtii HOM05D004041 ORTHO05D004564 1.7e-14 83.6 147 40.1
PRCOL_00006922 Prasinoderma coloniale HOM05D004041 ORTHO05D004564 1.7e-14 83.6 108 44.4
BcaC01g02423 Brassica carinata HOM05D004041 ORTHO05D004564 2.9e-14 82.8 83 55.4
Zm00001eb204760 Zea mays HOM05D004041 ORTHO05D004564 2.7e-12 76.3 109 45.0
Cfa024514 Carpinus fangiana HOM05D004041 ORTHO05D004564 3.5e-12 75.9 145 33.8
Zm00001eb357810 Zea mays HOM05D004041 ORTHO05D004564 4.6e-12 75.5 99 38.4
TPR.G10966 Trifolium pratense HOM05D004041 ORTHO05D004564 1.0e-11 74.3 49 75.5
CARHR261000 Cardamine hirsuta HOM05D004041 ORTHO05D004564 7.4e-10 68.2 67 55.2
SGA_v2.0_scaffold7G03771 Striga asiatica HOM05D004041 ORTHO05D004564 1.3e-09 67.4 67 52.2
Gorai.010G211700 Gossypium raimondii HOM05D004041 ORTHO05D004564 4.8e-09 65.5 100 42.0


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