Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 2.3e-117 425.6 219 100.0
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 2.6e-36 156.4 273 41.0
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 4.4e-36 155.6 239 46.0
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 6.3e-35 151.8 198 48.0
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 9.1e-34 147.9 200 46.5
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 1.2e-33 147.5 258 38.4
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 1.6e-33 147.1 266 38.3
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 4.5e-33 145.6 283 38.9
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 7.7e-33 144.8 254 39.8
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 7.7e-33 144.8 257 41.2
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 2.2e-32 143.3 261 40.6
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 2.2e-32 143.3 257 39.3
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 2.9e-32 142.9 257 39.3
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 6.5e-32 141.7 241 42.7
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 8.5e-32 141.4 261 41.0
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 1.1e-31 141.0 265 38.5
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 1.5e-31 140.6 292 36.6
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.5e-31 140.6 165 50.9
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 1.5e-31 140.6 165 52.7
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 3.2e-31 139.4 273 36.6
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 7.2e-31 138.3 255 37.3
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 9.4e-31 137.9 257 37.7
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 9.4e-31 137.9 167 49.1
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 1.6e-30 137.1 239 41.0
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 1.6e-30 137.1 165 49.7
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 4.7e-30 135.6 254 40.9
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 4.7e-30 135.6 264 39.4
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 1.4e-29 134.0 260 36.9
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 3.0e-29 132.9 263 38.4
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 6.7e-29 131.7 259 38.6
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 1.2e-28 131.0 258 38.0
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 1.2e-28 131.0 258 37.6
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 3.3e-28 129.4 171 44.4
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 7.5e-28 128.3 259 38.2
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 9.7e-28 127.9 271 37.3
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 1.3e-27 127.5 233 41.2
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 2.2e-27 126.7 264 36.7
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 2.8e-27 126.3 259 35.5
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 2.8e-27 126.3 207 43.5
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 4.8e-27 125.6 133 54.9
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 4.8e-27 125.6 140 50.7
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 4.8e-27 125.6 249 39.4
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 8.2e-27 124.8 256 36.7
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 1.1e-26 124.4 217 40.6
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 3.1e-26 122.9 166 45.8
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 4.1e-26 122.5 164 47.0
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 4.1e-26 122.5 116 58.6
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 9.1e-26 121.3 99 63.6
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 9.1e-26 121.3 136 50.0
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 1.2e-25 120.9 266 36.8
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 1.6e-25 120.6 250 39.6
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 2.0e-25 120.2 136 50.7
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 2.7e-25 119.8 163 45.4
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 3.5e-25 119.4 198 41.4
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 5.9e-25 118.6 194 41.8
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 5.9e-25 118.6 252 36.5
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 7.7e-25 118.2 261 35.2
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 7.7e-25 118.2 195 43.1
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 2.2e-24 116.7 147 50.3
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 2.2e-24 116.7 201 41.3
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 3.8e-24 115.9 217 41.5
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 6.5e-24 115.2 147 50.3
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 1.9e-23 113.6 271 32.5
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 1.9e-23 113.6 134 48.5
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 3.2e-23 112.8 256 36.3
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 7.2e-23 111.7 170 44.7
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 7.2e-23 111.7 209 37.8
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 9.4e-23 111.3 269 35.3
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 2.1e-22 110.2 125 51.2
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 8.0e-22 108.2 98 57.1
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 5.2e-21 105.5 101 58.4
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 5.2e-21 105.5 263 33.8
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 8.8e-21 104.8 141 46.1
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 4.4e-20 102.4 144 44.4
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 9.8e-20 101.3 294 29.9
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.3e-19 100.9 163 42.9
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 1.7e-19 100.5 193 36.8
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 2.2e-19 100.1 236 33.9
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 3.7e-19 99.4 142 45.8
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 3.7e-19 99.4 246 34.1
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 4.8e-19 99.0 109 56.0
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 6.3e-19 98.6 149 42.3
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 6.3e-19 98.6 201 37.8
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 8.3e-19 98.2 222 36.5
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 8.3e-19 98.2 202 38.1
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 3.1e-18 96.3 125 44.0
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 2.7e-17 93.2 267 33.7
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 3.5e-17 92.8 161 42.2
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 7.7e-17 91.7 184 39.1
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 5.0e-16 89.0 248 31.9
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 2.3e-13 80.1 109 47.7
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 2.0e-12 77.0 270 29.6
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 7.5e-12 75.1 59 59.3
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 1.3e-11 74.3 129 37.2
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.3e-08 64.3 77 51.9
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 2.3e-08 63.5 121 36.4
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 2.3e-08 63.5 161 34.8
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 2.9e-08 63.2 108 37.0
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.5e-07 60.8 66 50.0


User provided reference genes

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