Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 4.4e-83 311.2 154 100.0
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 2.5e-46 189.1 154 56.5
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 8.1e-45 184.1 157 59.9
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 4.9e-42 174.9 155 57.4
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 4.9e-42 174.9 151 61.6
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 4.9e-42 174.9 151 61.6
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 3.2e-41 172.2 150 60.7
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 3.2e-41 172.2 154 53.9
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 4.1e-41 171.8 139 61.2
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 7.1e-41 171.0 154 56.5
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 4.6e-40 168.3 154 56.5
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 6.0e-40 167.9 154 56.5
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 7.8e-40 167.5 154 56.5
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 1.7e-39 166.4 154 56.5
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 2.3e-39 166.0 155 52.9
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 5.1e-39 164.9 154 53.9
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 8.6e-39 164.1 144 57.6
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 2.5e-38 162.5 154 51.9
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 5.6e-38 161.4 154 53.9
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 7.3e-38 161.0 150 53.3
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 7.3e-38 161.0 152 54.6
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 1.2e-37 160.2 154 53.9
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 1.6e-37 159.8 154 55.8
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 3.6e-37 158.7 131 62.6
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 4.7e-37 158.3 134 60.4
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 4.7e-37 158.3 154 50.6
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 6.2e-37 157.9 108 66.7
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 1.4e-36 156.8 155 51.6
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 2.3e-36 156.0 135 61.5
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.2e-36 154.8 161 53.4
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 6.8e-36 154.5 108 69.4
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 6.8e-36 154.5 162 54.9
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 8.9e-36 154.1 108 68.5
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 8.9e-36 154.1 154 50.0
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 8.9e-36 154.1 154 50.6
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 8.9e-36 154.1 150 55.3
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.2e-35 153.7 161 53.4
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 2.6e-35 152.5 140 57.1
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 7.6e-35 151.0 133 57.9
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 2.2e-34 149.4 157 50.3
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 2.9e-34 149.1 97 69.1
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 3.7e-34 148.7 115 61.7
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 3.7e-34 148.7 115 60.9
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 4.9e-34 148.3 154 49.4
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 4.9e-34 148.3 158 50.0
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 4.9e-34 148.3 161 47.8
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 6.4e-34 147.9 156 49.4
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 6.4e-34 147.9 108 66.7
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 8.4e-34 147.5 101 68.3
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 1.4e-33 146.7 161 49.7
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 1.9e-33 146.4 160 48.8
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 3.2e-33 145.6 158 47.5
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 4.1e-33 145.2 158 46.8
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 5.4e-33 144.8 160 46.9
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 5.4e-33 144.8 115 58.3
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 7.1e-33 144.4 139 48.9
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 7.1e-33 144.4 154 49.4
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 7.1e-33 144.4 115 58.3
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 9.2e-33 144.1 142 50.0
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 2.1e-32 142.9 160 50.6
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 2.7e-32 142.5 158 49.4
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 2.7e-32 142.5 144 52.8
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 2.7e-32 142.5 115 57.4
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 3.5e-32 142.1 160 46.2
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 4.6e-32 141.7 160 46.2
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 4.6e-32 141.7 160 46.2
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 6.0e-32 141.4 115 56.5
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 7.8e-32 141.0 164 50.6
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 3.0e-31 139.0 140 50.7
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 3.0e-31 139.0 90 68.9
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 3.9e-31 138.7 154 49.4
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 5.1e-31 138.3 88 68.2
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 6.6e-31 137.9 98 63.3
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 6.6e-31 137.9 111 59.5
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 6.6e-31 137.9 111 59.5
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 8.6e-31 137.5 93 64.5
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 1.5e-30 136.7 160 45.0
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 1.5e-30 136.7 160 45.0
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 4.3e-30 135.2 87 71.3
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 4.3e-30 135.2 97 62.9
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 9.6e-30 134.0 129 51.2
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 2.1e-29 132.9 105 59.0
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 3.6e-29 132.1 90 66.7
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 8.1e-29 131.0 81 72.8
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 2.4e-28 129.4 93 62.4
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 8.9e-28 127.5 88 68.2
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 1.2e-27 127.1 75 74.7
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 7.6e-27 124.4 84 61.9
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 2.2e-26 122.9 127 51.2
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 7.3e-22 107.8 113 50.4
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.3e-21 107.1 160 40.0
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.3e-21 107.1 160 40.0
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 1.6e-21 106.7 111 51.4
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 6.9e-20 101.3 79 51.9
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 2.6e-19 99.4 78 51.3
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 2.6e-19 99.4 77 53.2
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.7e-18 96.7 92 52.2
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 4.9e-18 95.1 97 49.5
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 4.2e-17 92.0 120 40.8
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 5.1e-15 85.1 62 61.3
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 2.0e-11 73.2 49 65.3


User provided reference genes

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