Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 2.3e-81 305.4 150 100.0
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 1.5e-64 249.6 152 83.6
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 6.0e-45 184.5 154 64.3
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 7.8e-45 184.1 155 64.5
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 7.8e-45 184.1 147 66.0
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 1.6e-42 176.4 153 61.4
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 3.6e-42 175.3 148 62.8
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 4.0e-41 171.8 156 61.5
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 6.9e-41 171.0 151 58.9
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 6.9e-41 171.0 154 63.0
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 1.5e-40 169.9 148 60.1
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 2.6e-40 169.1 152 61.8
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 1.7e-39 166.4 148 61.5
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 9.3e-38 160.6 156 56.4
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 1.2e-37 160.2 153 57.5
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 7.9e-37 157.5 157 56.7
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 1.3e-36 156.8 166 54.2
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 2.3e-36 156.0 141 60.3
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 3.0e-36 155.6 151 57.0
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 6.7e-36 154.5 151 55.0
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 8.7e-36 154.1 152 57.2
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 1.1e-35 153.7 150 54.0
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 1.5e-35 153.3 151 55.0
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 1.5e-35 153.3 121 64.5
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 2.5e-35 152.5 151 57.0
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 9.6e-35 150.6 154 57.1
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 1.3e-34 150.2 111 69.4
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 2.8e-34 149.1 106 68.9
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 2.8e-34 149.1 149 55.7
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 1.1e-33 147.1 119 63.0
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 6.9e-33 144.4 156 53.8
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 6.9e-33 144.4 104 69.2
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 9.0e-33 144.1 87 75.9
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 2.0e-32 142.9 148 56.1
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 7.6e-32 141.0 153 52.9
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 7.6e-32 141.0 150 54.7
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 1.7e-31 139.8 151 55.0
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 1.7e-31 139.8 102 68.6
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 1.7e-31 139.8 109 65.1
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 3.8e-31 138.7 160 53.1
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 3.8e-31 138.7 65 90.8
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 4.9e-31 138.3 68 88.2
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 8.4e-31 137.5 93 67.7
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 8.4e-31 137.5 155 49.7
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 1.1e-30 137.1 154 52.6
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 1.4e-30 136.7 149 53.0
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 1.4e-30 136.7 110 63.6
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 1.4e-30 136.7 160 53.8
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 1.9e-30 136.3 68 88.2
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 2.4e-30 136.0 155 52.9
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 2.4e-30 136.0 65 89.2
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 3.2e-30 135.6 124 58.1
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 5.5e-30 134.8 81 76.5
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 5.5e-30 134.8 163 52.8
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 7.1e-30 134.4 109 60.6
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 7.1e-30 134.4 75 77.3
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 7.1e-30 134.4 68 82.4
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 9.3e-30 134.0 103 66.0
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 9.3e-30 134.0 108 65.7
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 1.2e-29 133.7 102 64.7
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 2.1e-29 132.9 157 51.6
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 2.1e-29 132.9 71 81.7
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 3.5e-29 132.1 90 65.6
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 3.5e-29 132.1 90 65.6
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 3.5e-29 132.1 67 86.6
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 4.6e-29 131.7 119 57.1
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 6.0e-29 131.3 74 73.0
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 7.9e-29 131.0 93 64.5
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 7.9e-29 131.0 93 64.5
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 7.9e-29 131.0 93 64.5
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 7.9e-29 131.0 93 64.5
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 7.9e-29 131.0 104 62.5
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 1.0e-28 130.6 150 52.0
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.0e-28 130.6 150 52.0
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 1.3e-28 130.2 93 66.7
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 1.3e-28 130.2 69 79.7
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 1.3e-28 130.2 154 51.3
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.8e-28 129.8 150 52.0
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 2.3e-28 129.4 128 53.1
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 3.0e-28 129.0 64 85.9
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 3.0e-28 129.0 93 66.7
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 3.0e-28 129.0 93 66.7
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 3.9e-28 128.6 86 66.3
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 5.1e-28 128.3 150 50.7
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 6.7e-28 127.9 110 57.3
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 1.5e-27 126.7 117 58.1
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 2.5e-27 125.9 110 60.0
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 3.3e-27 125.6 65 81.5
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 3.3e-27 125.6 104 60.6
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 3.3e-27 125.6 143 49.0
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 7.4e-27 124.4 74 74.3
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 7.4e-27 124.4 69 79.7
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 9.6e-27 124.0 102 62.7
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 9.6e-27 124.0 69 79.7
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 4.8e-26 121.7 114 55.3
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 1.4e-25 120.2 76 68.4
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 1.4e-25 120.2 81 67.9
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 1.8e-25 119.8 111 56.8
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 6.9e-25 117.9 103 56.3
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 2.6e-24 115.9 112 54.5
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 1.3e-23 113.6 65 72.3
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 2.5e-22 109.4 149 40.3
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 4.6e-21 105.1 52 84.6
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 1.5e-19 100.1 106 47.2
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 3.8e-15 85.5 63 55.6
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 9.3e-14 80.9 65 50.8
MBI06_g44793_MAGBIO Magnolia biondii HOM05D007361 ORTHO05D009239 1.7e-10 70.1 88 47.7
Sabra03G0102200 Salix brachista HOM05D007361 ORTHO05D009239 1.5e-08 63.5 86 50.0
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 2.2e-07 59.7 49 49.0


User provided reference genes

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