Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 1.9e-153 546.6 476 100.0
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 1.3e-125 454.1 479 81.8
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 4.8e-96 355.9 479 48.9
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 3.1e-95 353.2 481 64.0
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 6.9e-95 352.1 480 66.0
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 6.9e-95 352.1 474 66.9
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 1.2e-94 351.3 452 68.8
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 2.6e-94 350.1 474 69.4
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 5.8e-94 349.0 486 68.5
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.0e-93 348.2 474 69.2
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 1.3e-93 347.8 487 55.2
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.7e-93 347.4 474 68.4
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 2.2e-93 347.1 477 65.6
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 2.2e-93 347.1 477 71.9
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.4e-92 344.4 479 47.2
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 4.2e-92 342.8 478 43.5
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 5.5e-92 342.4 481 43.5
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 5.5e-92 342.4 479 47.0
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.6e-91 340.9 481 43.5
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 3.5e-91 339.7 486 61.5
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 6.0e-91 339.0 478 44.1
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 2.3e-90 337.0 450 46.9
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 4.3e-89 332.8 492 69.7
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 1.3e-88 331.3 493 44.0
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 3.7e-88 329.7 480 44.2
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 4.8e-88 329.3 478 43.7
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 6.3e-88 328.9 487 63.2
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 1.4e-87 327.8 481 71.1
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 1.8e-87 327.4 487 42.1
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 1.5e-86 324.3 484 43.6
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 3.4e-86 323.2 470 43.0
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 6.5e-85 318.9 480 42.3
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 8.5e-85 318.5 476 44.3
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 1.9e-84 317.4 488 55.1
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 2.5e-84 317.0 479 45.7
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 1.6e-83 314.3 493 62.1
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 3.6e-83 313.2 508 65.2
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 4.6e-83 312.8 489 68.3
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 4.6e-83 312.8 489 68.3
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 4.6e-83 312.8 449 67.3
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 7.9e-83 312.0 481 67.2
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 1.0e-82 311.6 496 68.8
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 1.3e-82 311.2 460 41.3
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.8e-82 310.8 446 55.4
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 2.3e-82 310.5 478 42.3
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 3.0e-82 310.1 487 56.5
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 3.9e-82 309.7 451 43.5
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 1.1e-81 308.1 495 64.8
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 1.5e-81 307.8 471 41.8
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 3.3e-81 306.6 479 44.3
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 7.4e-81 305.4 529 39.3
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 9.7e-81 305.1 487 66.5
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 1.4e-79 301.2 472 49.6
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 1.4e-79 301.2 508 66.9
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 5.3e-79 299.3 488 53.3
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.5e-78 297.7 523 53.5
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 3.4e-78 296.6 484 43.4
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 1.3e-77 294.7 518 66.8
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 2.9e-77 293.5 481 42.0
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 1.4e-76 291.2 481 40.5
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 3.2e-76 290.0 487 46.0
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 9.4e-76 288.5 480 41.7
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 1.6e-75 287.7 465 40.2
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 7.9e-75 285.4 482 39.2
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 1.0e-74 285.0 475 48.6
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 6.7e-74 282.3 488 42.6
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 1.5e-73 281.2 416 51.2
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 5.7e-73 279.3 499 62.1
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 2.8e-72 276.9 455 42.6
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 3.7e-72 276.6 471 38.0
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 3.1e-71 273.5 453 40.0
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 4.1e-71 273.1 475 50.7
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 4.1e-71 273.1 481 53.8
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 3.4e-70 270.0 461 38.0
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 1.0e-69 268.5 475 50.1
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 5.5e-68 262.7 437 39.1
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 7.2e-68 262.3 475 48.8
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 1.6e-67 261.2 475 43.6
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 1.6e-67 261.2 475 43.6
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 4.7e-67 259.6 475 46.1
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 7.9e-67 258.8 416 39.4
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 7.9e-67 258.8 409 44.3
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 3.9e-66 256.5 478 40.2
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 1.1e-65 255.0 476 56.5
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 1.1e-65 255.0 475 48.2
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 2.6e-65 253.8 496 49.0
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 3.3e-65 253.4 483 36.2
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 7.4e-65 252.3 476 57.1
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 1.3e-64 251.5 499 47.5
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 1.7e-64 251.1 486 45.5
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 3.7e-64 250.0 499 43.9
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 5.3e-63 246.1 166 75.3
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 5.3e-63 246.1 418 38.8
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 1.6e-62 244.6 476 58.6
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 2.0e-62 244.2 455 36.9
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 5.9e-62 242.7 436 40.1
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 3.8e-61 240.0 475 42.3
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 5.0e-61 239.6 414 54.1
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.1e-60 238.4 173 70.5
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 4.2e-60 236.5 476 46.6
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 2.1e-59 234.2 476 33.4
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 5.3e-55 219.5 416 56.7
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 9.1e-55 218.8 136 78.7
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 9.1e-55 218.8 569 50.4
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 1.2e-54 218.4 485 42.3
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 2.9e-53 213.8 417 50.8
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 5.0e-53 213.0 458 51.7
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 5.0e-53 213.0 458 51.7
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 2.5e-52 210.7 574 51.7
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 5.5e-52 209.5 408 43.1
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 2.1e-51 207.6 510 44.3
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 6.1e-51 206.1 453 33.6
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 6.1e-51 206.1 487 36.8
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 1.5e-49 201.4 485 32.8
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.7e-48 198.0 147 71.4
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 2.8e-48 197.2 130 76.2
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 1.6e-46 191.4 450 32.9
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 5.9e-46 189.5 492 30.9
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 2.5e-44 184.1 491 34.6
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 4.7e-43 179.9 412 40.0
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 3.4e-41 173.7 441 37.6
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 3.3e-36 157.1 154 53.9
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 9.5e-36 155.6 107 74.8
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 3.7e-32 143.7 175 47.4
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 1.0e-29 135.6 442 28.3
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 5.8e-25 119.8 421 34.9
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 3.9e-21 107.1 158 44.3
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 4.7e-19 100.1 74 63.5
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 6.2e-19 99.8 126 42.1
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 4.0e-18 97.1 109 49.5
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 6.6e-13 79.7 75 53.3
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 1.5e-12 78.6 94 44.7
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 7.3e-12 76.3 172 32.0


User provided reference genes

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