Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G0101 Tripterygium wilfordii HOM05D005242 ORTHO05D006778 1.3e-130 469.9 263 100.0
TWI60G1058 Tripterygium wilfordii HOM05D005242 ORTHO05D006778 5.8e-51 205.3 150 77.3
Potri.002G067700 Populus trichocarpa HOM05D005242 ORTHO05D006778 1.6e-45 187.2 197 54.3
PGR042G2442 Punica granatum HOM05D005242 ORTHO05D006778 2.6e-43 179.9 312 41.7
Atru.chr13.2099 Acer truncatum HOM05D005242 ORTHO05D006778 4.4e-43 179.1 239 46.4
Haze_17757 Corylus avellana HOM05D005242 ORTHO05D006778 5.8e-43 178.7 196 50.0
Eucgr.F02701 Eucalyptus grandis HOM05D005242 ORTHO05D006778 5.8e-43 178.7 280 43.6
Potri.005G192700 Populus trichocarpa HOM05D005242 ORTHO05D006778 5.8e-43 178.7 231 50.6
QL02p039039 Quercus lobata HOM05D005242 ORTHO05D006778 7.5e-43 178.3 207 49.3
Lj5g0003985 Lotus japonicus HOM05D005242 ORTHO05D006778 9.9e-43 177.9 265 43.8
arahy.Tifrunner.gnm1.ann1.661UAU Arachis hypogaea HOM05D005242 ORTHO05D006778 1.3e-42 177.6 207 48.8
arahy.Tifrunner.gnm1.ann1.3DXP20 Arachis hypogaea HOM05D005242 ORTHO05D006778 2.2e-42 176.8 214 47.2
arahy.Tifrunner.gnm1.ann1.BM3N3L Arachis hypogaea HOM05D005242 ORTHO05D006778 3.7e-42 176.0 261 42.9
CiPaw.16G012200 Carya illinoinensis HOM05D005242 ORTHO05D006778 6.4e-42 175.3 242 46.3
Duzib041G0461 Durio zibethinus HOM05D005242 ORTHO05D006778 1.4e-41 174.1 147 60.5
Sabra05G0147300 Salix brachista HOM05D005242 ORTHO05D006778 1.4e-41 174.1 222 49.1
Lalb_Chr21g0305491 Lupinus albus HOM05D005242 ORTHO05D006778 5.4e-41 172.2 262 43.5
arahy.Tifrunner.gnm1.ann1.H39N2I Arachis hypogaea HOM05D005242 ORTHO05D006778 7.1e-41 171.8 261 41.0
Cfa018319 Carpinus fangiana HOM05D005242 ORTHO05D006778 9.2e-41 171.4 192 48.4
Ciclev10003945m.g Citrus clementina HOM05D005242 ORTHO05D006778 2.1e-40 170.2 228 46.5
COL.COLO4_08566 Corchorus olitorius HOM05D005242 ORTHO05D006778 2.1e-40 170.2 144 60.4
Manes.02G179900 Manihot esculenta HOM05D005242 ORTHO05D006778 2.1e-40 170.2 195 50.3
Thecc.08G153500 Theobroma cacao HOM05D005242 ORTHO05D006778 7.8e-40 168.3 152 59.2
Rhsim11G0083400 Rhododendron simsii HOM05D005242 ORTHO05D006778 1.0e-39 167.9 234 43.2
MD05G1026800 Malus domestica HOM05D005242 ORTHO05D006778 1.7e-39 167.2 226 42.5
MD10G1026100 Malus domestica HOM05D005242 ORTHO05D006778 2.3e-39 166.8 224 45.1
Aa31LG4G6850 Aethionema arabicum HOM05D005242 ORTHO05D006778 6.6e-39 165.2 226 47.8
Glyma.10G224400 Glycine max HOM05D005242 ORTHO05D006778 1.1e-38 164.5 263 41.4
CANSAT25G1562 Cannabis sativa HOM05D005242 ORTHO05D006778 2.5e-38 163.3 321 36.8
CARHR070310 Cardamine hirsuta HOM05D005242 ORTHO05D006778 4.3e-38 162.5 143 56.6
Gorai.009G254600 Gossypium raimondii HOM05D005242 ORTHO05D006778 9.5e-38 161.4 143 58.7
Psat6g192600 Pisum sativum HOM05D005242 ORTHO05D006778 1.6e-37 160.6 263 38.8
AT1G76770 Arabidopsis thaliana HOM05D005242 ORTHO05D006778 2.1e-37 160.2 142 56.3
Aqoxy5G02077 Aquilegia oxysepala HOM05D005242 ORTHO05D006778 3.6e-37 159.5 188 45.2
Medtr1g098690 Medicago truncatula HOM05D005242 ORTHO05D006778 4.7e-37 159.1 264 40.5
Prupe.8G031300 Prunus persica HOM05D005242 ORTHO05D006778 4.7e-37 159.1 228 41.2
TPR.G31185 Trifolium pratense HOM05D004559 ORTHO05D005283 6.2e-37 158.7 170 49.4
CiPaw.15G015900 Carya illinoinensis HOM05D005242 ORTHO05D006778 1.8e-36 157.1 177 48.0
Oeu011949.1 Olea europaea HOM05D005242 ORTHO05D006778 1.8e-36 157.1 286 37.8
Carub.0002s2368 Capsella rubella HOM05D005242 ORTHO05D006778 3.1e-36 156.4 162 50.6
DCAR_001139 Daucus carota HOM05D005242 ORTHO05D006778 4.0e-36 156.0 271 39.1
AL2G36920 Arabidopsis lyrata HOM05D005242 ORTHO05D006778 5.2e-36 155.6 154 53.9
BraA02t07119Z Brassica rapa HOM05D005242 ORTHO05D006778 5.2e-36 155.6 150 52.0
CSS0002508 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 8.9e-36 154.8 235 43.8
Medtr1246s0010 Medicago truncatula HOM05D005242 ORTHO05D006778 1.2e-35 154.5 151 51.7
Peaxi162Scf00599g00049 Petunia axillaris HOM05D005242 ORTHO05D006778 1.2e-35 154.5 310 38.7
CSS0020035 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 1.5e-35 154.1 235 43.8
CSS0021128 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 1.5e-35 154.1 263 38.8
Dinv25870 Davidia involucrata HOM05D005242 ORTHO05D006778 1.5e-35 154.1 223 48.0
Lalb_Chr19g0130231 Lupinus albus HOM05D005242 ORTHO05D006778 1.5e-35 154.1 226 43.8
Nn5g28757 Nelumbo nucifera HOM05D005242 ORTHO05D006778 1.5e-35 154.1 242 43.4
Glyma.20G167400 Glycine max HOM05D005242 ORTHO05D006778 3.4e-35 152.9 262 40.8
FAN20G3127 Fragaria x ananassa HOM05D005242 ORTHO05D006778 4.4e-35 152.5 235 41.3
FAN24G0150 Fragaria x ananassa HOM05D005242 ORTHO05D006778 4.4e-35 152.5 228 42.5
Glyma.16G166700 Glycine max HOM05D005242 ORTHO05D006778 5.8e-35 152.1 236 42.4
A02p20880 Brassica napus HOM05D005242 ORTHO05D006778 7.6e-35 151.8 146 51.4
SalBow6G1825 Salvia bowleyana HOM05D005242 ORTHO05D006778 7.6e-35 151.8 212 46.2
AT1G76780 Arabidopsis thaliana HOM05D005242 ORTHO05D006778 9.9e-35 151.4 232 42.2
SGA_v2.0_scaffold19G08682 Striga asiatica HOM05D001302 ORTHO05D001107 1.3e-34 151.0 273 39.2
BraA02t07120Z Brassica rapa HOM05D005242 ORTHO05D018625 1.7e-34 150.6 237 40.5
Lj2g0024086 Lotus japonicus HOM05D005242 ORTHO05D006778 1.7e-34 150.6 215 42.8
vmacro01456 Vaccinium macrocarpon HOM05D005242 ORTHO05D006778 1.7e-34 150.6 210 43.3
C02p32790 Brassica napus HOM05D005242 ORTHO05D006778 2.2e-34 150.2 146 51.4
VMungo0464G2160 Vigna mungo HOM05D005242 ORTHO05D006778 2.2e-34 150.2 246 39.8
BcaC03g15701 Brassica carinata HOM05D005242 ORTHO05D006778 2.9e-34 149.8 146 51.4
THA.LOC104813717 Tarenaya hassleriana HOM05D005242 ORTHO05D006778 2.9e-34 149.8 169 52.1
FAN15G2695 Fragaria x ananassa HOM05D005242 ORTHO05D006778 3.8e-34 149.4 228 42.5
Cc10_g14420 Coffea canephora HOM05D005242 ORTHO05D006778 4.9e-34 149.1 286 36.7
PSO210G0022 Papaver somniferum HOM05D005242 ORTHO05D006778 4.9e-34 149.1 215 43.3
Phvul.007G080300 Phaseolus vulgaris HOM05D005242 ORTHO05D006778 1.1e-33 147.9 261 37.5
Actinidia29532 Actinidia chinensis HOM05D005242 ORTHO05D006778 1.9e-33 147.1 223 42.6
Glyma.02G081300 Glycine max HOM05D005242 ORTHO05D006778 1.9e-33 147.1 224 43.3
A07p42410 Brassica napus HOM05D005242 ORTHO05D006778 4.1e-33 146.0 140 54.3
Gohir.A05G243801 Gossypium hirsutum HOM05D005242 ORTHO05D006778 5.4e-33 145.6 230 42.2
FAN27G0674 Fragaria x ananassa HOM05D005242 ORTHO05D006778 7.1e-33 145.2 212 40.1
A02p20890 Brassica napus HOM05D005242 ORTHO05D018625 9.2e-33 144.8 233 42.1
Psat1g101840 Pisum sativum HOM05D005242 ORTHO05D006778 9.2e-33 144.8 225 42.2
BolC2t09420H Brassica oleracea HOM05D005242 ORTHO05D018625 1.6e-32 144.1 154 48.7
RcHm_v2.0_Chr6g0275301 Rosa chinensis HOM05D005242 ORTHO05D006778 3.5e-32 142.9 214 39.7
CAN.G268.26 Capsicum annuum HOM05D005242 ORTHO05D006778 4.6e-32 142.5 309 35.6
C06p50980 Brassica napus HOM05D005242 ORTHO05D006778 1.0e-31 141.4 135 54.8
BraA07t31767Z Brassica rapa HOM05D005242 ORTHO05D006778 1.0e-31 141.4 141 53.9
THA.LOC104812037 Tarenaya hassleriana HOM05D005242 ORTHO05D006778 1.0e-31 141.4 144 50.0
PSO447G0326 Papaver somniferum HOM05D005242 ORTHO05D006778 1.3e-31 141.0 215 41.9
Aa31LG4G6840 Aethionema arabicum HOM05D005242 ORTHO05D006778 1.7e-31 140.6 132 50.8
Sc26g0002570 Simmondsia chinensis HOM05D005242 ORTHO05D006778 2.3e-31 140.2 281 36.7
VMungo0720G2917 Vigna mungo HOM05D005242 ORTHO05D006778 3.9e-31 139.4 170 48.2
BolC6t40122H Brassica oleracea HOM05D005242 ORTHO05D006778 5.1e-31 139.0 133 54.9
PGSC0003DMG400024099 Solanum tuberosum HOM05D005242 ORTHO05D006778 6.6e-31 138.7 288 35.1
Solyc04g071490.3 Solanum lycopersicum HOM05D005242 ORTHO05D006778 1.5e-30 137.5 144 50.7
AUR62026703 Chenopodium quinoa HOM05D005242 ORTHO05D006778 2.5e-30 136.7 293 36.5
Peaxi162Scf01294g00121 Petunia axillaris HOM05D005242 ORTHO05D006778 7.3e-30 135.2 309 35.3
Nitab4.5_0001062g0060 Nicotiana tabacum HOM05D005242 ORTHO05D006778 9.6e-30 134.8 151 50.3
Actinidia17789 Actinidia chinensis HOM05D005242 ORTHO05D006778 2.1e-29 133.7 304 32.6
Nitab4.5_0010749g0010 Nicotiana tabacum HOM05D005242 ORTHO05D006778 2.8e-29 133.3 320 35.0
EL10Ac1g01555 Beta vulgaris HOM05D005242 ORTHO05D006778 3.6e-29 132.9 275 36.7
GSVIVG01034538001 Vitis vinifera HOM05D005242 ORTHO05D006778 4.7e-29 132.5 220 39.5
AUR62013591 Chenopodium quinoa HOM05D005242 ORTHO05D006778 6.2e-29 132.1 281 35.2
Sopen04g027460 Solanum pennellii HOM05D005242 ORTHO05D006778 6.2e-29 132.1 297 33.3
CAN.G18.12 Capsicum annuum HOM05D005242 ORTHO05D006778 5.2e-28 129.0 272 34.9
BcaB05g25009 Brassica carinata HOM05D005242 ORTHO05D006778 9.9e-27 124.8 146 49.3
Cpa.g.sc21.205 Carica papaya HOM05D005242 ORTHO05D006778 3.8e-26 122.9 194 41.8
BcaC03g15702 Brassica carinata HOM05D005242 ORTHO05D018625 1.4e-25 120.9 142 45.8
Migut.N03213 Erythranthe guttata HOM05D005242 ORTHO05D006778 1.4e-25 120.9 144 49.3
Ca_27679_v3 Cicer arietinum L. HOM05D005242 ORTHO05D006778 1.1e-22 111.3 203 37.4
CDE02G4447 Ceratophyllum demersum HOM05D005242 ORTHO05D006778 3.3e-22 109.8 216 35.6
Hund17437 Selenicereus undatus HOM05D005242 ORTHO05D006778 1.3e-21 107.8 264 34.1
ClCG09G010170 Citrullus lanatus HOM05D005242 ORTHO05D006778 2.1e-21 107.1 223 36.8
Sc02g0004040 Simmondsia chinensis HOM05D005242 ORTHO05D006778 2.1e-21 107.1 220 36.8
DCAR_014441 Daucus carota HOM05D005242 ORTHO05D006778 4.8e-21 105.9 334 27.8
CDE08G0940 Ceratophyllum demersum HOM05D005242 ORTHO05D006778 1.1e-20 104.8 153 39.9
HanXRQChr05g0161961 Helianthus annuus HOM05D005242 ORTHO05D006778 1.1e-20 104.8 264 27.7
Lsat_1_v5_gn_6_100581 Lactuca sativa HOM05D005242 ORTHO05D006778 3.1e-20 103.2 252 31.7
Lsat_1_v5_gn_9_40940 Lactuca sativa HOM05D005242 ORTHO05D006778 9.9e-19 98.2 166 38.6
ATR0820G162 Amborella trichopoda HOM05D005242 ORTHO05D006778 1.7e-18 97.4 227 35.2
FvH4_2g13660 Fragaria vesca HOM05D005242 ORTHO05D006778 1.4e-17 94.4 178 39.9
PGSC0003DMG402010796 Solanum tuberosum HOM05D005242 ORTHO05D006778 5.4e-17 92.4 264 27.3
unitig_52.g17530 Utricularia gibba HOM05D005242 ORTHO05D006778 9.3e-17 91.7 257 31.5
Sopen12g029170 Solanum pennellii HOM05D005242 ORTHO05D006778 6.0e-16 89.0 262 26.0
BcaC03g15700 Brassica carinata HOM05D005242 ORTHO05D006778 7.9e-16 88.6 107 45.8
Solyc12g056560.2 Solanum lycopersicum HOM05D005242 ORTHO05D006778 1.3e-15 87.8 262 28.2
GSVIVG01034537001 Vitis vinifera HOM05D005242 ORTHO05D006778 3.9e-15 86.3 197 33.5
Carub.0002s2369 Capsella rubella HOM05D005242 ORTHO05D018625 1.9e-14 84.0 89 50.6
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.8e-13 80.1 212 30.7
Nitab4.5_0002487g0010 Nicotiana tabacum HOM05D001302 ORTHO05D001107 5.3e-12 75.9 260 28.5
Sed0006497 Sechium edule HOM05D005242 ORTHO05D006778 5.3e-12 75.9 141 38.3
Sp5g31920 Schrenkiella parvula HOM05D005242 ORTHO05D006778 3.4e-11 73.2 72 55.6
Ca_10684_v3 Cicer arietinum L. HOM05D005242 ORTHO05D006778 2.2e-10 70.5 182 31.9
Nitab4.5_0004505g0020 Nicotiana tabacum HOM05D005242 ORTHO05D006778 2.4e-09 67.0 151 33.8
ECA246G4795 Erigeron canadensis HOM05D000028 ORTHO05D001176 4.2e-09 66.2 223 28.7
Zm00001eb139380 Zea mays HOM05D005242 ORTHO05D006778 1.6e-08 64.3 100 36.0
Phvul.004G094700 Phaseolus vulgaris HOM05D005242 ORTHO05D006778 1.1e-06 58.2 131 37.4
MBI09_g45000_MAGBIO Magnolia biondii HOM05D005242 ORTHO05D006778 2.5e-06 57.0 73 38.4
ECA232G5004 Erigeron canadensis HOM05D005242 ORTHO05D006778 4.3e-06 56.2 166 28.3


User provided reference genes

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