Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G0009 Tripterygium wilfordii HOM05D008483 ORTHO05D010726 7.5e-158 562.0 283 100.0
Cpa.g.sc137.16 Carica papaya HOM05D008483 ORTHO05D010726 9.2e-55 219.5 261 44.1
Potri.015G036400 Populus trichocarpa HOM05D008483 ORTHO05D010726 1.6e-54 218.8 262 46.2
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 5.2e-50 203.8 251 42.6
Duzib213G0258 Durio zibethinus HOM05D008483 ORTHO05D010726 8.9e-50 203.0 257 42.8
Thecc.07G080600 Theobroma cacao HOM05D008483 ORTHO05D010726 1.2e-49 202.6 258 40.7
CSS0019242 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 3.4e-49 201.1 265 42.3
CSS0039397 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 3.4e-49 201.1 265 42.3
Sabra15G0030100 Salix brachista HOM05D008483 ORTHO05D010726 4.9e-48 197.2 256 43.4
Sabra15G0031000 Salix brachista HOM05D008483 ORTHO05D010726 2.4e-47 194.9 256 42.6
Cfa012968 Carpinus fangiana HOM05D008483 ORTHO05D010726 7.0e-47 193.4 245 42.9
MD12G1033400 Malus domestica HOM05D008483 ORTHO05D010726 4.6e-46 190.7 252 41.3
Hma1.2p1_1933F.1_g308065 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 7.3e-44 183.3 254 39.8
GSVIVG01022790001 Vitis vinifera HOM05D008483 ORTHO05D010726 2.3e-42 178.3 245 39.2
DCAR_008181 Daucus carota HOM05D008483 ORTHO05D010726 3.0e-37 161.4 232 40.1
THA.LOC104812723 Tarenaya hassleriana HOM05D008483 ORTHO05D010726 5.1e-37 160.6 286 35.3
Prupe.1G555500 Prunus persica HOM05D008483 ORTHO05D010726 1.2e-35 156.0 234 37.6
Cc08_g05050 Coffea canephora HOM05D008483 ORTHO05D010726 5.2e-34 150.6 290 34.1
Prupe.1G569400 Prunus persica HOM05D008483 ORTHO05D010726 2.0e-33 148.7 240 37.1
Sp1g27550 Schrenkiella parvula HOM05D008483 ORTHO05D010726 3.2e-31 141.4 261 34.9
Actinidia18161 Actinidia chinensis HOM05D008483 ORTHO05D010726 4.2e-31 141.0 265 34.7
AUR62027321 Chenopodium quinoa HOM05D008483 ORTHO05D010726 3.9e-29 134.4 218 37.6
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 3.9e-29 134.4 229 35.4
Aa31LG2G14190 Aethionema arabicum HOM05D008483 ORTHO05D010726 5.1e-29 134.0 247 34.8
Lsat_1_v5_gn_3_23061 Lactuca sativa HOM05D008483 ORTHO05D010726 5.6e-28 130.6 269 33.1
Nn8g41093 Nelumbo nucifera HOM05D008483 ORTHO05D010726 9.6e-28 129.8 234 35.9
AUR62007411 Chenopodium quinoa HOM05D008483 ORTHO05D010726 1.2e-27 129.4 205 37.1
Thhalv10009444m.g Eutrema salsugineum HOM05D008483 ORTHO05D010726 1.8e-26 125.6 209 34.4
AT1G31840 Arabidopsis thaliana HOM05D008483 ORTHO05D010726 3.1e-26 124.8 270 33.3
Gohir.A01G064800 Gossypium hirsutum HOM05D008483 ORTHO05D010726 4.0e-26 124.4 227 31.7
Nitab4.5_0002941g0070 Nicotiana tabacum HOM05D008483 ORTHO05D010726 4.0e-26 124.4 218 33.5
Gohir.D01G051900 Gossypium hirsutum HOM05D008483 ORTHO05D010726 1.5e-25 122.5 222 32.0
Nitab4.5_0000030g0110 Nicotiana tabacum HOM05D008483 ORTHO05D010726 2.0e-25 122.1 220 33.6
Rhsim12G0158300 Rhododendron simsii HOM05D008483 ORTHO05D010726 2.0e-25 122.1 182 39.0
Carub.0001s3017 Capsella rubella HOM05D008483 ORTHO05D010726 4.4e-25 120.9 197 34.0
Gorai.002G071800 Gossypium raimondii HOM05D008483 ORTHO05D010726 5.8e-25 120.6 222 31.5
Oeu019187.1 Olea europaea HOM05D008483 ORTHO05D010726 7.6e-25 120.2 237 33.8
Eucgr.A00288 Eucalyptus grandis HOM05D008483 ORTHO05D010726 2.2e-24 118.6 207 31.9
Hma1.2p1_0560F.1_g178890 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 2.9e-24 118.2 176 37.5
Ciclev10003653m.g Citrus clementina HOM05D008483 ORTHO05D010726 6.4e-24 117.1 230 31.7
Ciclev10013671m.g Citrus clementina HOM05D008483 ORTHO05D010726 1.9e-23 115.5 197 34.0
TAR381G0371 Trochodendron aralioides HOM05D008483 ORTHO05D010726 4.2e-23 114.4 165 38.2
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 1.7e-21 109.0 251 32.7
EL10Ac5g11926 Beta vulgaris HOM05D008483 ORTHO05D010726 2.5e-20 105.1 205 33.2
ECA246G3844 Erigeron canadensis HOM05D008483 ORTHO05D010726 2.4e-15 88.6 177 29.9
MBI13_g10040_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 2.7e-14 85.1 178 29.8
AL1G45930 Arabidopsis lyrata HOM05D008483 ORTHO05D010726 7.9e-14 83.6 107 42.1
HanXRQChr08g0227881 Helianthus annuus HOM05D007212 ORTHO05D009094 3.4e-09 68.2 212 23.1
RcHm_v2.0_Chr2g0139321 Rosa chinensis HOM05D008483 ORTHO05D010726 1.6e-06 59.3 173 26.6


User provided reference genes

Program Settings