Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 3.2e-87 325.1 167 100.0
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 3.2e-87 325.1 167 100.0
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 7.4e-52 207.6 181 63.0
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 3.7e-51 205.3 174 64.9
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 2.4e-50 202.6 176 63.1
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 3.1e-50 202.2 172 62.2
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 4.0e-50 201.8 180 63.3
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 4.0e-50 201.8 180 63.3
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 1.2e-49 200.3 176 61.9
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 1.2e-49 200.3 152 68.4
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 2.6e-49 199.1 140 71.4
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 4.5e-49 198.4 180 62.2
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 1.0e-48 197.2 161 65.8
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 1.0e-48 197.2 179 62.0
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.3e-48 196.8 152 67.8
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 2.2e-48 196.1 164 64.6
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 2.9e-48 195.7 174 64.4
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 3.8e-48 195.3 167 64.7
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 8.4e-48 194.1 152 67.1
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 2.5e-47 192.6 178 62.9
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 4.2e-47 191.8 181 61.3
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 4.2e-47 191.8 158 63.9
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 5.5e-47 191.4 111 82.9
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 7.1e-47 191.0 173 60.7
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 7.1e-47 191.0 127 78.0
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 7.1e-47 191.0 152 68.4
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 1.6e-46 189.9 160 65.6
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 2.1e-46 189.5 141 69.5
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 3.5e-46 188.7 160 63.1
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 3.5e-46 188.7 184 58.7
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 3.5e-46 188.7 147 68.0
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 3.5e-46 188.7 139 69.8
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 1.0e-45 187.2 130 73.8
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 1.0e-45 187.2 154 67.5
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 2.3e-45 186.0 144 66.0
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 2.3e-45 186.0 167 61.1
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 3.0e-45 185.7 103 86.4
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 3.9e-45 185.3 162 63.0
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 6.7e-45 184.5 112 80.4
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 8.7e-45 184.1 172 62.8
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 1.9e-44 183.0 177 59.9
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 1.9e-44 183.0 161 61.5
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 2.5e-44 182.6 165 61.2
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 3.3e-44 182.2 166 61.4
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 3.3e-44 182.2 166 61.4
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 3.3e-44 182.2 166 61.4
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 3.3e-44 182.2 134 67.9
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 7.4e-44 181.0 146 61.6
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 7.4e-44 181.0 111 80.2
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 7.4e-44 181.0 103 83.5
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 9.7e-44 180.6 134 71.6
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 1.6e-43 179.9 141 63.1
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 1.6e-43 179.9 120 75.0
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 1.6e-43 179.9 103 86.4
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 2.2e-43 179.5 143 60.1
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 3.7e-43 178.7 178 53.4
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 3.7e-43 178.7 178 53.4
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 3.7e-43 178.7 153 64.1
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 4.8e-43 178.3 141 63.1
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 6.3e-43 177.9 124 73.4
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 6.3e-43 177.9 141 61.7
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 6.3e-43 177.9 128 69.5
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 1.1e-42 177.2 144 63.2
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 1.8e-42 176.4 140 62.9
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.8e-42 176.4 102 84.3
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 1.8e-42 176.4 142 64.8
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 2.4e-42 176.0 138 68.1
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 3.1e-42 175.6 174 58.0
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 4.1e-42 175.3 130 68.5
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 4.1e-42 175.3 103 80.6
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 5.3e-42 174.9 133 65.4
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 6.9e-42 174.5 102 80.4
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 9.0e-42 174.1 102 81.4
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 1.2e-41 173.7 121 71.9
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 2.0e-41 172.9 105 80.0
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 3.4e-41 172.2 133 66.9
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 3.4e-41 172.2 134 66.4
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 3.4e-41 172.2 106 78.3
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 5.9e-41 171.4 172 53.5
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 1.3e-40 170.2 176 53.4
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 1.3e-40 170.2 111 75.7
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 1.7e-40 169.9 104 76.0
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 2.2e-40 169.5 157 58.0
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 2.2e-40 169.5 104 75.0
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 2.2e-40 169.5 159 58.5
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 3.8e-40 168.7 104 75.0
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 1.9e-39 166.4 126 67.5
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 1.2e-38 163.7 105 73.3
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 3.6e-38 162.2 109 66.1
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 4.6e-38 161.8 112 67.9
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 1.4e-37 160.2 170 55.3
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 3.9e-37 158.7 114 70.2
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 1.9e-36 156.4 106 70.8
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 4.3e-36 155.2 207 46.9
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 9.7e-36 154.1 87 85.1
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 9.7e-36 154.1 88 83.0
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 2.2e-35 152.9 102 69.6
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 3.1e-34 149.1 89 79.8
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 2.1e-30 136.3 110 56.4
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 2.1e-30 136.3 110 56.4
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.0e-29 134.0 85 75.3
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 2.6e-28 129.4 109 53.2
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 2.8e-27 125.9 100 58.0
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 1.2e-25 120.6 111 55.0
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 1.5e-12 77.0 38 89.5


User provided reference genes

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