Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 2.2e-51 205.3 102 100.0
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.4e-40 169.5 103 85.4
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 2.2e-38 162.2 102 80.4
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 4.1e-37 157.9 102 80.4
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 3.5e-36 154.8 102 77.5
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.3e-35 152.9 102 75.5
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 5.0e-35 151.0 101 76.2
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 5.0e-35 151.0 103 76.7
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 6.5e-35 150.6 103 76.7
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.5e-34 149.4 101 75.2
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.9e-34 149.1 102 74.5
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.9e-34 149.1 102 74.5
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 1.9e-34 149.1 102 74.5
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 3.2e-34 148.3 102 76.5
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 1.6e-33 146.0 101 77.2
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 1.6e-33 146.0 102 73.5
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 1.6e-33 146.0 101 74.3
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.6e-33 146.0 102 75.5
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.1e-33 145.6 102 75.5
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 3.6e-33 144.8 102 77.5
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 6.1e-33 144.1 102 73.5
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 6.1e-33 144.1 100 78.0
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 8.0e-33 143.7 102 73.5
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 2.3e-32 142.1 102 72.5
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 5.2e-32 141.0 102 73.5
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 5.2e-32 141.0 102 72.5
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 6.8e-32 140.6 102 73.5
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 8.8e-32 140.2 102 71.6
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 8.8e-32 140.2 102 72.5
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.2e-31 139.8 104 73.1
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 1.5e-31 139.4 102 71.6
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 1.5e-31 139.4 103 71.8
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 3.4e-31 138.3 102 72.5
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 3.4e-31 138.3 102 71.6
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 4.4e-31 137.9 102 75.5
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 5.7e-31 137.5 101 67.3
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 9.8e-31 136.7 102 66.7
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 9.8e-31 136.7 102 73.5
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 2.2e-30 135.6 97 71.1
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 3.7e-30 134.8 102 69.6
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 8.3e-30 133.7 101 68.3
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 1.4e-29 132.9 102 72.5
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 1.8e-29 132.5 100 68.0
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 1.8e-29 132.5 103 71.8
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 1.8e-29 132.5 103 69.9
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 2.4e-29 132.1 100 68.0
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 5.4e-29 131.0 95 73.7
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 9.1e-29 130.2 103 66.0
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 9.1e-29 130.2 103 66.0
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 1.2e-28 129.8 97 68.0
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 1.2e-28 129.8 102 69.6
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 2.7e-28 128.6 97 67.0
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 2.7e-28 128.6 99 67.7
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 2.7e-28 128.6 103 65.0
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 3.5e-28 128.3 99 67.7
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 5.9e-28 127.5 102 68.6
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 5.9e-28 127.5 99 67.7
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 5.9e-28 127.5 103 65.0
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 7.7e-28 127.1 102 68.6
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 1.0e-27 126.7 103 65.0
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 1.0e-27 126.7 92 73.9
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 2.9e-27 125.2 104 65.4
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 2.9e-27 125.2 104 65.4
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 6.5e-27 124.0 93 71.0
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 8.6e-27 123.6 104 64.4
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 8.6e-27 123.6 104 64.4
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 1.1e-26 123.2 100 62.0
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 1.1e-26 123.2 102 65.7
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 1.9e-26 122.5 101 67.3
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 2.5e-26 122.1 100 65.0
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 3.3e-26 121.7 95 66.3
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 5.5e-26 120.9 96 66.7
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 7.2e-26 120.6 104 62.5
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 9.5e-26 120.2 104 61.5
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 1.2e-25 119.8 104 62.5
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 2.1e-25 119.0 101 64.4
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 1.8e-24 115.9 95 64.2
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 1.8e-24 115.9 101 66.3
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 1.8e-24 115.9 102 58.8
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 2.3e-24 115.5 105 61.0
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 4.0e-24 114.8 103 62.1
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 4.0e-24 114.8 103 62.1
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 4.0e-24 114.8 103 62.1
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 5.2e-24 114.4 100 63.0
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 6.8e-24 114.0 100 62.0
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 8.9e-24 113.6 95 63.2
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.2e-23 113.2 98 66.3
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 1.5e-23 112.8 103 61.2
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 4.4e-23 111.3 103 61.2
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 2.9e-19 98.6 84 60.7
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 3.3e-18 95.1 80 63.8
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 1.2e-17 93.2 114 53.5
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 4.7e-17 91.3 102 53.9
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 1.4e-16 89.7 91 59.3
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 5.2e-16 87.8 88 58.0
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 2.6e-15 85.5 64 71.9
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 8.3e-14 80.5 76 60.5
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 2.4e-13 79.0 95 48.4
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 3.9e-11 71.6 105 46.7
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.5e-07 59.7 105 37.1


User provided reference genes

Program Settings