Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 4.1e-187 657.9 330 100.0
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 9.9e-125 450.7 330 67.3
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 2.4e-123 446.0 330 67.3
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 3.2e-123 445.7 330 66.4
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 5.4e-123 444.9 330 67.0
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 2.7e-122 442.6 327 66.7
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 3.0e-121 439.1 342 64.9
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.5e-120 436.8 330 64.5
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.5e-120 436.0 328 64.3
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 4.3e-120 435.3 330 65.8
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.6e-119 433.3 330 65.5
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.6e-119 433.3 330 65.5
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 2.1e-119 433.0 330 67.6
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 4.8e-119 431.8 328 65.9
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 3.8e-116 422.2 328 65.5
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 8.4e-116 421.0 330 62.7
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 2.4e-115 419.5 330 62.1
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.5e-112 410.2 330 60.9
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 1.5e-112 410.2 330 61.2
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 9.6e-112 407.5 330 62.4
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 4.8e-111 405.2 331 61.0
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 4.0e-110 402.1 337 59.1
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 6.9e-110 401.4 330 64.5
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 2.6e-109 399.4 330 61.5
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 7.6e-109 397.9 330 59.7
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 1.7e-108 396.7 330 60.9
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 1.7e-108 396.7 332 61.1
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.7e-108 396.7 330 60.0
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 3.8e-108 395.6 331 63.7
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 3.8e-108 395.6 327 61.2
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 4.9e-108 395.2 345 56.8
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 4.9e-108 395.2 330 58.2
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.4e-107 393.7 330 63.9
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 1.4e-107 393.7 331 60.1
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 3.2e-107 392.5 330 60.3
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 4.2e-107 392.1 330 59.1
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 5.4e-107 391.7 328 59.1
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 5.4e-107 391.7 330 60.6
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 7.1e-107 391.3 330 60.0
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 7.1e-107 391.3 330 60.0
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.2e-106 390.6 329 59.6
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 1.2e-106 390.6 330 60.0
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 2.1e-106 389.8 328 59.1
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 3.5e-106 389.0 299 65.9
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 3.5e-106 389.0 330 59.4
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 4.6e-106 388.7 320 60.6
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 7.9e-106 387.9 332 61.4
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 6.7e-105 384.8 338 62.7
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 6.7e-105 384.8 327 59.3
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 8.7e-105 384.4 334 58.7
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 8.7e-105 384.4 332 59.0
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.1e-104 384.0 338 62.4
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 1.1e-104 384.0 330 59.1
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 2.5e-104 382.9 330 59.4
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 4.3e-104 382.1 333 58.0
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 4.3e-104 382.1 330 60.3
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 4.3e-104 382.1 333 58.3
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 9.6e-104 380.9 330 57.3
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 1.4e-102 377.1 326 58.9
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 2.4e-102 376.3 334 56.9
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 6.9e-102 374.8 328 58.5
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 9.0e-102 374.4 330 57.3
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 9.0e-102 374.4 330 57.3
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 1.2e-101 374.0 333 57.1
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 1.5e-101 373.6 330 59.1
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 4.5e-101 372.1 335 57.0
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 6.5e-100 368.2 339 60.5
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 6.5e-100 368.2 367 55.3
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.1e-99 367.5 330 56.7
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 7.1e-99 364.8 335 56.4
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 1.6e-98 363.6 330 57.0
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 3.9e-97 359.0 328 55.5
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 1.5e-96 357.1 330 57.9
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 2.5e-96 356.3 297 60.3
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 4.3e-96 355.5 332 57.5
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 4.3e-96 355.5 332 57.5
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 4.3e-96 355.5 329 55.9
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 5.7e-96 355.1 332 56.6
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 5.7e-96 355.1 330 56.7
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 3.7e-95 352.4 267 65.5
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 4.8e-95 352.1 330 55.5
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 6.2e-95 351.7 328 55.8
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 8.2e-95 351.3 332 58.4
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 2.4e-94 349.7 303 60.4
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 6.9e-94 348.2 331 54.7
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 9.0e-94 347.8 329 55.9
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 3.4e-93 345.9 291 60.5
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 3.8e-92 342.4 294 59.5
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 1.9e-88 330.1 335 52.2
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.1e-86 324.3 332 52.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.4e-83 313.9 334 51.8
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 6.1e-82 308.5 335 53.4
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 3.9e-81 305.8 328 51.5
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 5.5e-75 285.4 332 45.5
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 2.1e-74 283.5 330 47.6
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 4.7e-74 282.3 269 57.6
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.8e-73 280.4 260 55.8
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 7.4e-72 275.0 339 45.1
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 1.0e-68 264.6 332 46.1
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 5.5e-67 258.8 348 42.0
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 3.6e-66 256.1 218 58.7
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 7.7e-61 238.4 340 40.6
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.0e-60 238.0 384 37.5
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 2.7e-58 229.9 268 48.1
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 4.7e-58 229.2 383 36.0
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 8.8e-49 198.4 134 70.9
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 6.6e-44 182.2 133 66.9
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.8e-42 176.8 164 56.1
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 8.3e-39 165.2 124 65.3
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 6.6e-36 155.6 113 69.0
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.5e-35 154.5 134 56.0
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.4e-33 147.9 223 40.8
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 2.3e-33 147.1 349 30.4
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 3.4e-32 143.3 117 60.7
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 4.0e-25 119.8 87 66.7
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 1.5e-24 117.9 120 54.2
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 3.7e-23 113.2 146 46.6
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.4e-22 111.3 100 57.0
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 2.0e-16 90.9 120 45.8
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.4e-16 90.1 59 72.9
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 4.4e-16 89.7 105 51.4
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.6e-13 81.3 69 56.5
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 6.6e-12 75.9 105 38.1
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 7.3e-11 72.4 53 67.9
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 6.8e-09 65.9 49 61.2


User provided reference genes

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