Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 4.4e-129 464.9 285 100.0
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 6.1e-107 391.3 282 81.9
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 1.5e-60 237.3 308 54.5
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 7.4e-60 235.0 306 48.7
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 1.2e-57 227.6 285 58.6
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 2.2e-56 223.4 289 49.1
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 8.4e-56 221.5 314 56.1
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 4.2e-55 219.2 325 50.5
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 5.5e-55 218.8 317 55.8
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 2.1e-54 216.9 299 53.8
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 2.1e-54 216.9 319 49.2
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 6.0e-54 215.3 308 53.6
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 3.0e-53 213.0 321 54.2
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 3.0e-53 213.0 289 51.6
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 1.6e-51 207.2 302 51.7
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 2.1e-51 206.8 288 56.2
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 4.8e-51 205.7 324 50.3
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 6.2e-51 205.3 308 54.2
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 8.2e-51 204.9 311 54.0
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 1.4e-50 204.1 307 56.0
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 1.8e-50 203.8 293 50.5
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 2.4e-50 203.4 133 69.2
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 2.4e-50 203.4 317 55.5
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 2.4e-50 203.4 294 59.9
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 3.1e-50 203.0 338 45.3
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 4.0e-50 202.6 293 57.7
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 5.3e-50 202.2 309 45.3
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 6.9e-50 201.8 296 50.7
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 1.5e-49 200.7 315 51.1
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 2.0e-49 200.3 322 53.1
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 4.5e-49 199.1 289 47.8
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 5.8e-49 198.7 138 72.5
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 1.7e-48 197.2 299 49.5
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 2.2e-48 196.8 290 49.7
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 2.9e-48 196.4 351 41.9
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 3.8e-48 196.1 297 56.2
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 4.9e-48 195.7 311 51.4
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.9e-48 195.7 298 48.3
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 1.4e-47 194.1 351 43.0
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 1.4e-47 194.1 334 44.6
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 1.9e-47 193.7 284 52.8
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 4.2e-47 192.6 303 47.9
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 9.3e-47 191.4 306 50.7
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 1.2e-46 191.0 308 56.2
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.6e-46 190.7 298 48.0
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 3.5e-46 189.5 325 53.2
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 3.5e-46 189.5 133 62.4
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 4.6e-46 189.1 294 51.0
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 4.6e-46 189.1 319 45.5
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 7.9e-46 188.3 286 43.0
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 1.0e-45 188.0 125 69.6
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 1.8e-45 187.2 310 51.6
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 2.3e-45 186.8 304 53.6
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 3.0e-45 186.4 125 68.8
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 3.0e-45 186.4 139 63.3
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 3.9e-45 186.0 313 49.2
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 6.7e-45 185.3 129 63.6
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 1.5e-44 184.1 132 65.2
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 1.5e-44 184.1 129 68.2
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 1.5e-44 184.1 121 70.2
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.5e-44 184.1 290 42.8
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 1.9e-44 183.7 132 65.2
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 5.7e-44 182.2 385 39.7
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 9.7e-44 181.4 120 72.5
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 9.7e-44 181.4 291 52.9
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 2.2e-43 180.3 282 50.0
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 2.2e-43 180.3 197 60.9
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 2.8e-43 179.9 121 68.6
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 2.8e-43 179.9 332 45.5
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.8e-43 179.9 285 54.4
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 4.8e-43 179.1 282 54.3
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 4.8e-43 179.1 285 53.3
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 6.3e-43 178.7 130 67.7
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 8.2e-43 178.3 287 49.5
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 8.2e-43 178.3 130 67.7
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 1.1e-42 177.9 129 62.0
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 1.4e-42 177.6 124 62.9
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 1.8e-42 177.2 279 39.8
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 3.1e-42 176.4 124 66.1
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 3.1e-42 176.4 121 71.1
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 6.9e-42 175.3 303 41.6
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 9.0e-42 174.9 328 39.9
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 2.0e-41 173.7 127 64.6
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 2.0e-41 173.7 127 64.6
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 2.0e-41 173.7 127 64.6
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 3.4e-41 172.9 113 68.1
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 3.4e-41 172.9 155 56.8
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 7.7e-41 171.8 120 64.2
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 7.7e-41 171.8 116 64.7
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 1.0e-40 171.4 308 50.0
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.0e-40 171.4 307 51.1
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 1.3e-40 171.0 277 46.9
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 1.7e-40 170.6 111 70.3
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 5.0e-40 169.1 287 47.4
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 5.0e-40 169.1 131 62.6
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 6.5e-40 168.7 293 46.4
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 8.5e-40 168.3 338 49.1
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 1.4e-39 167.5 126 64.3
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.9e-39 167.2 287 48.8
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.5e-39 166.8 212 49.1
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.5e-39 166.8 126 64.3
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 3.2e-39 166.4 135 63.0
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 3.2e-39 166.4 134 62.7
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 4.2e-39 166.0 391 43.2
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 5.5e-39 165.6 293 52.2
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 9.4e-39 164.9 351 47.6
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 9.4e-39 164.9 122 67.2
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 9.4e-39 164.9 124 66.9
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 2.1e-38 163.7 312 49.4
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.4e-37 161.0 114 66.7
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 3.0e-37 159.8 352 42.9
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 3.9e-37 159.5 301 50.5
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 5.1e-37 159.1 396 42.9
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 8.8e-37 158.3 287 41.1
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 8.8e-37 158.3 114 66.7
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 1.5e-36 157.5 274 42.0
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 2.0e-36 157.1 315 42.9
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 2.5e-36 156.8 320 43.1
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 2.5e-36 156.8 267 46.1
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 3.3e-36 156.4 301 45.8
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 3.3e-36 156.4 301 45.8
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 3.3e-36 156.4 390 43.3
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 3.3e-36 156.4 301 45.8
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 3.3e-36 156.4 301 45.8
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 5.7e-36 155.6 115 67.8
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 7.4e-36 155.2 123 59.3
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 9.7e-36 154.8 306 43.1
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 1.3e-35 154.5 129 61.2
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 1.7e-35 154.1 150 56.7
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 4.8e-35 152.5 291 39.2
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 1.4e-34 151.0 253 47.4
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 4.1e-34 149.4 125 55.2
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 9.1e-34 148.3 107 63.6
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 3.4e-33 146.4 132 59.1
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 4.5e-33 146.0 120 58.3
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 5.9e-33 145.6 273 42.1
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 7.7e-33 145.2 135 59.3
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 7.7e-33 145.2 141 54.6
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 1.7e-32 144.1 393 39.2
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 5.0e-32 142.5 135 53.3
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 1.9e-31 140.6 134 50.0
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 2.5e-31 140.2 119 60.5
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 3.2e-31 139.8 193 45.1
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.2e-30 137.9 124 54.0
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 4.7e-30 136.0 113 59.3
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 1.4e-29 134.4 111 53.2
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 1.4e-29 134.4 126 57.9
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 1.8e-29 134.0 96 66.7
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 1.8e-29 134.0 114 58.8
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 1.8e-29 134.0 114 56.1
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 2.3e-29 133.7 114 58.8
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 2.3e-29 133.7 114 58.8
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 2.3e-29 133.7 114 58.8
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 3.9e-29 132.9 330 44.2
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 5.1e-29 132.5 127 57.5
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 4.4e-28 129.4 116 58.6
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 5.7e-28 129.0 111 51.4
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 5.7e-28 129.0 109 56.9
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 2.2e-27 127.1 116 54.3
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 2.2e-27 127.1 299 46.5
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 1.4e-26 124.4 272 51.5
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 5.3e-26 122.5 109 56.9
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 5.3e-26 122.5 320 39.1
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 4.5e-25 119.4 111 49.5
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 1.9e-23 114.0 289 38.4
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 9.4e-23 111.7 307 44.0
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 3.6e-22 109.8 115 47.8
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 2.3e-21 107.1 90 50.0
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 7.0e-18 95.5 109 46.8
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 2.9e-16 90.1 126 43.7
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 1.9e-15 87.4 131 39.7
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.2e-14 84.7 124 40.3
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 1.8e-13 80.9 69 56.5
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 4.0e-13 79.7 106 41.5
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 2.6e-12 77.0 109 41.3
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.2e-11 73.9 119 36.1
Hma1.2p1_0073F.1_g038610 Hydrangea macrophylla HOM05D003750 ORTHO05D004337 2.8e-11 73.6 212 47.2
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 6.3e-11 72.4 45 55.6
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 4.1e-10 69.7 114 36.8
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 7.0e-10 68.9 108 37.0
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 9.1e-10 68.6 117 37.6
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.7e-08 64.3 114 33.3
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 5.5e-07 59.3 87 35.6
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 8.0e-06 55.5 109 34.9


User provided reference genes

Program Settings