Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 3.7e-104 381.7 217 100.0
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 6.6e-53 211.5 225 57.8
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 6.2e-51 204.9 234 55.1
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 8.4e-48 194.5 242 50.4
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 8.4e-48 194.5 224 52.7
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 1.4e-47 193.7 233 53.6
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 9.3e-47 191.0 238 50.0
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 9.3e-47 191.0 228 52.6
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 2.1e-46 189.9 227 51.1
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 6.0e-46 188.3 224 50.4
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 2.3e-45 186.4 244 48.8
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 6.7e-45 184.9 238 48.7
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 4.3e-44 182.2 227 49.8
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 2.1e-43 179.9 227 53.3
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 2.8e-43 179.5 227 56.8
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 2.8e-43 179.5 237 55.3
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 2.8e-43 179.5 236 49.2
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 6.2e-43 178.3 227 56.8
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 1.8e-42 176.8 231 48.5
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 4.0e-42 175.6 225 48.4
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 6.9e-42 174.9 144 79.2
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 1.2e-41 174.1 224 50.0
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 2.0e-41 173.3 229 53.3
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 2.6e-41 172.9 231 51.9
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 3.4e-41 172.6 240 47.1
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 3.4e-41 172.6 234 48.3
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 4.5e-41 172.2 225 55.1
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 5.8e-41 171.8 230 50.0
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 2.2e-40 169.9 215 53.0
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 2.9e-40 169.5 229 52.8
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 2.9e-40 169.5 226 51.3
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 3.8e-40 169.1 216 47.2
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 1.1e-39 167.5 231 48.1
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 2.4e-39 166.4 230 47.4
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 2.4e-39 166.4 214 52.3
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 5.5e-39 165.2 235 45.5
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 7.1e-39 164.9 231 53.7
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 1.2e-38 164.1 228 46.9
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 2.7e-38 162.9 238 45.4
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 1.0e-37 161.0 230 47.0
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 1.0e-37 161.0 241 45.6
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 1.0e-37 161.0 235 45.5
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 1.3e-37 160.6 238 49.6
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.0e-37 159.5 226 48.2
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 3.0e-37 159.5 232 53.4
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 3.9e-37 159.1 218 48.6
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 3.9e-37 159.1 233 51.9
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 6.7e-37 158.3 236 46.2
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 2.5e-36 156.4 227 48.5
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.5e-36 156.4 227 48.5
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.5e-36 156.4 227 48.5
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 2.5e-36 156.4 221 51.6
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 5.6e-36 155.2 226 46.9
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 5.6e-36 155.2 242 43.0
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 7.4e-36 154.8 235 49.4
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 1.6e-35 153.7 232 44.8
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 2.1e-35 153.3 229 45.0
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 4.8e-35 152.1 233 44.2
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 1.1e-34 151.0 235 48.5
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 1.4e-34 150.6 232 44.4
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 1.4e-34 150.6 244 45.5
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 3.1e-34 149.4 233 43.8
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.0e-34 149.1 227 46.7
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 2.0e-33 146.7 223 50.2
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 5.8e-33 145.2 235 42.6
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 7.6e-33 144.8 232 43.5
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 7.6e-33 144.8 227 47.1
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.7e-32 143.7 237 44.3
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.2e-32 143.3 227 45.4
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 2.9e-32 142.9 224 42.9
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 2.9e-32 142.9 236 42.8
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 8.4e-32 141.4 212 47.2
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 8.4e-32 141.4 232 44.4
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 1.1e-31 141.0 229 41.9
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 1.1e-31 141.0 216 45.4
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 1.4e-31 140.6 216 44.9
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 1.9e-31 140.2 274 38.7
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 3.2e-31 139.4 230 43.5
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 5.5e-31 138.7 236 42.4
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 7.1e-31 138.3 217 42.9
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 9.3e-31 137.9 233 41.6
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 1.2e-30 137.5 228 40.8
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 7.9e-30 134.8 218 42.2
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 1.8e-29 133.7 233 43.8
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 3.9e-29 132.5 222 45.5
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 6.3e-27 125.2 228 41.2
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 8.2e-27 124.8 206 45.1
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 1.4e-26 124.0 247 38.5
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 3.1e-26 122.9 227 40.1
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 4.1e-26 122.5 352 30.4
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 7.6e-25 118.2 233 39.5
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 7.6e-25 118.2 177 46.3
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 1.7e-24 117.1 113 54.0
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 8.5e-24 114.8 244 37.7
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 1.9e-23 113.6 194 40.7
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 5.5e-23 112.1 230 45.7
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 1.0e-21 107.8 68 75.0
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 5.1e-21 105.5 74 66.2
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 6.7e-21 105.1 193 41.5
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 3.3e-20 102.8 236 41.5
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 4.3e-20 102.4 73 64.4
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 7.4e-20 101.7 151 42.4
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 2.2e-19 100.1 74 66.2
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 6.3e-19 98.6 140 48.6
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 1.2e-17 94.4 145 43.4
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 2.0e-17 93.6 142 49.3
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 2.6e-17 93.2 141 42.6
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 3.4e-17 92.8 172 39.0
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 8.5e-16 88.2 69 55.1
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 2.5e-15 86.7 180 38.9
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 1.5e-12 77.4 231 32.5
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 2.0e-12 77.0 134 41.8
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 9.7e-12 74.7 67 58.2
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 1.7e-11 73.9 207 33.8
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 6.3e-11 72.0 151 36.4
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 6.9e-10 68.6 245 29.0
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 2.2e-08 63.5 205 29.3
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 2.9e-08 63.2 235 31.1
Hma1.2p1_0053F.1_g030890 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 2.5e-07 60.1 124 41.9


User provided reference genes

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