Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0909 Tripterygium wilfordii HOM05D004886 ORTHO05D005868 3.6e-94 348.2 173 100.0
TWI14G0309 Tripterygium wilfordii HOM05D004886 ORTHO05D005868 4.4e-84 314.7 173 89.0
VMungo0331G0020 Vigna mungo HOM05D004886 ORTHO05D005868 5.4e-74 281.2 173 81.5
vmacro13553 Vaccinium macrocarpon HOM05D004886 ORTHO05D005868 7.1e-74 280.8 173 82.1
Phvul.010G040200 Phaseolus vulgaris HOM05D004886 ORTHO05D005868 1.6e-73 279.6 173 80.9
Ciclev10022551m.g Citrus clementina HOM05D004886 ORTHO05D005868 2.7e-73 278.9 173 80.9
Psat4g216480 Pisum sativum HOM05D004886 ORTHO05D005868 2.7e-73 278.9 176 81.2
Rhsim07G0040800 Rhododendron simsii HOM05D004886 ORTHO05D005868 7.8e-73 277.3 173 80.9
Rhsim07G0041300 Rhododendron simsii HOM05D004886 ORTHO05D005868 7.8e-73 277.3 173 80.9
RhsimUnG0113600 Rhododendron simsii HOM05D004886 ORTHO05D005868 7.8e-73 277.3 173 80.9
Glyma.03G100700 Glycine max HOM05D004886 ORTHO05D005868 1.0e-72 276.9 175 80.6
TPR.G17348 Trifolium pratense HOM05D004886 ORTHO05D005868 1.0e-72 276.9 181 79.0
Hund26556 Selenicereus undatus HOM05D004886 ORTHO05D005868 1.7e-72 276.2 173 76.9
MELO3C022467.2 Cucumis melo HOM05D004886 ORTHO05D005868 3.9e-72 275.0 173 79.8
Medtr8g009670 Medicago truncatula HOM05D004886 ORTHO05D005868 5.1e-72 274.6 178 78.7
Actinidia05803 Actinidia chinensis HOM05D004886 ORTHO05D005868 1.1e-71 273.5 173 80.3
Gorai.012G082000 Gossypium raimondii HOM05D004886 ORTHO05D005868 1.1e-71 273.5 174 79.9
CSS0044670 Camellia sinensis var. sinensis HOM05D004886 ORTHO05D005868 1.5e-71 273.1 178 78.1
CiPaw.13G020500 Carya illinoinensis HOM05D004886 ORTHO05D005868 2.5e-71 272.3 174 81.0
Lj3g0025670 Lotus japonicus HOM05D004886 ORTHO05D005868 2.5e-71 272.3 173 79.2
Lalb_Chr07g0194931 Lupinus albus HOM05D004886 ORTHO05D005868 2.5e-71 272.3 175 78.3
Gohir.A05G333500 Gossypium hirsutum HOM05D004886 ORTHO05D005868 3.3e-71 271.9 174 78.7
Hma1.2p1_0021F.1_g014430 Hydrangea macrophylla HOM05D004886 ORTHO05D005868 3.3e-71 271.9 171 77.8
Oeu002885.1 Olea europaea HOM05D004886 ORTHO05D005868 3.3e-71 271.9 173 78.6
Atru.chr5.18 Acer truncatum HOM05D004886 ORTHO05D005868 7.3e-71 270.8 173 79.8
Gohir.D04G073000 Gossypium hirsutum HOM05D004886 ORTHO05D005868 7.3e-71 270.8 174 79.3
Potri.014G179500 Populus trichocarpa HOM05D004886 ORTHO05D005868 7.3e-71 270.8 172 82.0
CiPaw.14G014400 Carya illinoinensis HOM05D004886 ORTHO05D005868 9.6e-71 270.4 173 78.6
Sed0007303 Sechium edule HOM05D004886 ORTHO05D005868 9.6e-71 270.4 173 79.8
AT2G44525 Arabidopsis thaliana HOM05D004886 ORTHO05D005868 1.3e-70 270.0 173 75.7
BcaB02g08829 Brassica carinata HOM05D004886 ORTHO05D005868 2.1e-70 269.2 173 74.0
AL4G43550 Arabidopsis lyrata HOM05D004886 ORTHO05D005868 2.8e-70 268.9 173 75.7
CANSAT21G0345 Cannabis sativa HOM05D004886 ORTHO05D005868 3.6e-70 268.5 181 76.2
Manes.05G060800 Manihot esculenta HOM05D004886 ORTHO05D005868 3.6e-70 268.5 171 79.5
GSVIVG01018384001 Vitis vinifera HOM05D004886 ORTHO05D005868 4.8e-70 268.1 171 78.9
Carub.0004s2709 Capsella rubella HOM05D004886 ORTHO05D005868 8.1e-70 267.3 173 74.6
arahy.Tifrunner.gnm1.ann1.FT2T1Y Arachis hypogaea HOM05D004886 ORTHO05D005868 1.1e-69 266.9 176 78.4
Nitab4.5_0001476g0110 Nicotiana tabacum HOM05D004886 ORTHO05D005868 1.1e-69 266.9 175 76.6
Sp4g26620 Schrenkiella parvula HOM05D004886 ORTHO05D005868 1.1e-69 266.9 173 74.6
Aa31LG1G26120 Aethionema arabicum HOM05D004886 ORTHO05D005868 1.4e-69 266.5 173 74.6
MSTRG.28124 Avicennia marina HOM05D004886 ORTHO05D005868 1.4e-69 266.5 173 76.3
CARHR139740 Cardamine hirsuta HOM05D004886 ORTHO05D005868 1.4e-69 266.5 173 74.0
COL.COLO4_20817 Corchorus olitorius HOM05D004886 ORTHO05D005868 1.4e-69 266.5 175 77.7
Duzib128G0726 Durio zibethinus HOM05D004886 ORTHO05D005868 1.4e-69 266.5 174 78.2
BraA05t19444Z Brassica rapa HOM05D004886 ORTHO05D005868 1.8e-69 266.2 173 74.0
A05p04680 Brassica napus HOM05D004886 ORTHO05D005868 2.4e-69 265.8 173 73.4
Nitab4.5_0004264g0010 Nicotiana tabacum HOM05D004886 ORTHO05D005868 2.4e-69 265.8 175 76.0
BcaC02g12300 Brassica carinata HOM05D004886 ORTHO05D005868 3.1e-69 265.4 173 73.4
C04p05420 Brassica napus HOM05D004886 ORTHO05D005868 3.1e-69 265.4 173 73.4
THA.LOC104817165 Tarenaya hassleriana HOM05D004886 ORTHO05D005868 3.1e-69 265.4 173 75.1
BolC4t22182H Brassica oleracea HOM05D004886 ORTHO05D005868 6.9e-69 264.2 173 72.8
Lsat_1_v5_gn_6_101400 Lactuca sativa HOM05D004886 ORTHO05D005868 6.9e-69 264.2 171 77.8
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 1.2e-68 263.5 158 81.6
Cc02_g25880 Coffea canephora HOM05D004886 ORTHO05D005868 1.2e-68 263.5 170 77.1
Thhalv10006276m.g Eutrema salsugineum HOM05D004886 ORTHO05D005868 1.2e-68 263.5 173 74.6
HanXRQChr05g0162431 Helianthus annuus HOM05D004886 ORTHO05D005868 1.2e-68 263.5 173 77.5
Thhalv10001659m.g Eutrema salsugineum HOM05D004886 ORTHO05D005868 2.6e-68 262.3 173 73.4
PGR044G2350 Punica granatum HOM05D004886 ORTHO05D005868 2.6e-68 262.3 173 76.9
QL04p024857 Quercus lobata HOM05D004886 ORTHO05D005868 2.6e-68 262.3 175 76.0
arahy.Tifrunner.gnm1.ann1.U68WY7 Arachis hypogaea HOM05D004886 ORTHO05D005868 3.4e-68 261.9 176 77.8
RcHm_v2.0_Chr3g0487321 Rosa chinensis HOM05D004886 ORTHO05D005868 3.4e-68 261.9 159 81.1
Migut.N01703 Erythranthe guttata HOM05D004886 ORTHO05D005868 9.9e-68 260.4 173 75.7
FAN28G1372 Fragaria x ananassa HOM05D004886 ORTHO05D005868 9.9e-68 260.4 159 80.5
Prupe.3G009000 Prunus persica HOM05D004886 ORTHO05D005868 9.9e-68 260.4 172 77.3
FAN23G1419 Fragaria x ananassa HOM05D004886 ORTHO05D005868 1.7e-67 259.6 159 79.9
Thecc.10G000600 Theobroma cacao HOM05D004886 ORTHO05D005868 1.7e-67 259.6 197 70.6
Prupe.2G110500 Prunus persica HOM05D004886 ORTHO05D005868 2.9e-67 258.8 164 78.7
A04p01810 Brassica napus HOM05D004886 ORTHO05D005868 3.8e-67 258.5 173 72.3
BraA04t15905Z Brassica rapa HOM05D004886 ORTHO05D005868 3.8e-67 258.5 173 72.3
ECA246G0884 Erigeron canadensis HOM05D004886 ORTHO05D005868 3.8e-67 258.5 173 75.1
FvH4_1g27010 Fragaria vesca HOM05D004886 ORTHO05D005868 3.8e-67 258.5 159 79.9
MBI04_g13864_MAGBIO Magnolia biondii HOM05D004886 ORTHO05D005868 3.8e-67 258.5 170 75.9
EL10Ac8g19580 Beta vulgaris HOM05D004886 ORTHO05D005868 4.9e-67 258.1 173 73.4
Eucgr.D01136 Eucalyptus grandis HOM05D004886 ORTHO05D005868 6.4e-67 257.7 174 74.7
CsaV3_6G004620 Cucumis sativus L. HOM05D004886 ORTHO05D005868 1.1e-66 256.9 202 67.8
MD07G1082600 Malus domestica HOM05D004886 ORTHO05D005868 1.1e-66 256.9 174 73.6
Peaxi162Scf01124g00012 Petunia axillaris HOM05D004886 ORTHO05D005868 2.4e-66 255.8 170 75.9
CsaV3_6G021750 Cucumis sativus L. HOM05D004886 ORTHO05D005868 3.2e-66 255.4 202 67.3
CsaV3_6G037000 Cucumis sativus L. HOM05D004886 ORTHO05D005868 3.2e-66 255.4 202 67.3
Solyc01g088350.4 Solanum lycopersicum HOM05D004886 ORTHO05D005868 4.2e-66 255.0 173 72.3
Sopen01g035180 Solanum pennellii HOM05D004886 ORTHO05D005868 4.2e-66 255.0 173 72.3
MD09G1285000 Malus domestica HOM05D004886 ORTHO05D005868 7.1e-66 254.2 183 69.9
SalBow4G2359 Salvia bowleyana HOM05D004886 ORTHO05D005868 7.1e-66 254.2 169 76.3
BcaB02g08189 Brassica carinata HOM05D004886 ORTHO05D005868 9.3e-66 253.8 171 71.3
FAN26G2919 Fragaria x ananassa HOM05D004886 ORTHO05D005868 9.3e-66 253.8 159 78.6
Nn1g07674 Nelumbo nucifera HOM05D004886 ORTHO05D005868 1.2e-65 253.4 172 73.8
PSO782G3769 Papaver somniferum HOM05D004886 ORTHO05D005868 1.2e-65 253.4 174 73.0
Aqoxy3G02476 Aquilegia oxysepala HOM05D004886 ORTHO05D005868 2.1e-65 252.7 173 71.7
PSO063G1771 Papaver somniferum HOM05D004886 ORTHO05D005868 2.1e-65 252.7 174 72.4
AT3G60150 Arabidopsis thaliana HOM05D004886 ORTHO05D005868 3.5e-65 251.9 173 72.3
Sp5g03060 Schrenkiella parvula HOM05D004886 ORTHO05D005868 4.6e-65 251.5 173 71.7
CAN.G74.36 Capsicum annuum HOM05D004886 ORTHO05D005868 6.0e-65 251.1 172 70.3
TAR375G0952 Trochodendron aralioides HOM05D004886 ORTHO05D005868 6.0e-65 251.1 159 77.4
unitig_85.g27219 Utricularia gibba HOM05D004886 ORTHO05D005868 3.9e-64 248.4 174 71.8
C04p32550 Brassica napus HOM05D004886 ORTHO05D005868 8.7e-64 247.3 166 71.7
FAN19G1058 Fragaria x ananassa HOM05D004886 ORTHO05D005868 1.5e-63 246.5 159 78.0
Carub.0005s2688 Capsella rubella HOM05D004886 ORTHO05D005868 2.5e-63 245.7 174 71.8
BcaC02g10116 Brassica carinata HOM05D004886 ORTHO05D005868 3.3e-63 245.4 166 71.1
BolC4t24818H Brassica oleracea HOM05D004886 ORTHO05D005868 3.3e-63 245.4 166 71.1
AUR62034033 Chenopodium quinoa HOM05D004886 ORTHO05D005868 1.3e-62 243.4 173 70.5
Haze_02935 Corylus avellana HOM05D004886 ORTHO05D005868 3.7e-62 241.9 177 71.2
vmacro21096 Vaccinium macrocarpon HOM05D004886 ORTHO05D005868 1.2e-60 236.9 220 60.5
DCAR_015764 Daucus carota HOM05D004886 ORTHO05D005868 4.5e-60 235.0 208 60.6
HPP92_003510 Vanilla planifolia HOM05D004886 ORTHO05D005868 5.8e-60 234.6 170 67.1
Zm00001eb024270 Zea mays HOM05D004886 ORTHO05D005868 5.8e-60 234.6 167 68.3
Zm00001eb390620 Zea mays HOM05D004886 ORTHO05D005868 3.8e-59 231.9 167 67.1
SGA_v2.0_scaffold77G25231 Striga asiatica HOM05D000012 ORTHO05D001060 1.1e-58 230.3 227 56.4
Sabra14G0137800 Salix brachista HOM05D004886 ORTHO05D005868 3.5e-57 225.3 265 51.3
CsaV3_UNG176370 Cucumis sativus L. HOM05D004886 ORTHO05D005868 1.3e-56 223.4 211 59.2
CsaV3_6G006530 Cucumis sativus L. HOM05D004886 ORTHO05D005868 3.0e-56 222.2 139 79.1
Sed0018381 Sechium edule HOM05D004886 ORTHO05D005868 1.5e-55 219.9 190 66.3
Dinv44001 Davidia involucrata HOM05D004886 ORTHO05D005868 7.4e-55 217.6 144 74.3
CDE11G0764 Ceratophyllum demersum HOM05D004886 ORTHO05D005868 3.1e-53 212.2 169 60.9
Ah.09g232340 Amaranthus hybridus HOM05D004886 ORTHO05D005868 1.3e-51 206.8 174 63.2
Actinidia30969 Actinidia chinensis HOM05D004886 ORTHO05D005868 1.4e-50 203.4 120 83.3
Lj9C547T8 Lonicera japonica HOM05D004886 ORTHO05D005868 1.6e-49 199.9 184 63.0
CAN.G1480.6 Capsicum annuum HOM05D004886 ORTHO05D005868 2.4e-45 186.0 113 77.0
HPP92_003514 Vanilla planifolia HOM05D004886 ORTHO05D005868 2.4e-45 186.0 170 56.5
ClCG06G000740 Citrullus lanatus HOM05D004886 ORTHO05D005868 2.6e-44 182.6 173 60.1
SGA_v2.0_scaffold95G28731 Striga asiatica HOM05D004886 ORTHO05D005868 1.3e-38 163.7 117 67.5
SHI13674 Sapria himalayana HOM05D004886 ORTHO05D005868 3.7e-38 162.2 113 67.3
Cpa.g.sc587.3 Carica papaya HOM05D004886 ORTHO05D005868 1.1e-37 160.6 109 76.1
Sabra14G0139700 Salix brachista HOM05D004886 ORTHO05D005868 5.9e-36 154.8 111 71.2
Mapoly0033s0133 Marchantia polymorpha HOM05D004886 ORTHO05D005868 1.7e-35 153.3 143 49.0
Dinv43568 Davidia involucrata HOM05D004886 ORTHO05D005868 2.9e-35 152.5 98 77.6
Nn1g07677 Nelumbo nucifera HOM05D004886 ORTHO05D005868 2.9e-35 152.5 109 69.7
Sc23g0004110 Simmondsia chinensis HOM05D004886 ORTHO05D005868 2.9e-35 152.5 119 65.5
Pp3c12_4990 Physcomitrium patens HOM05D004886 ORTHO05D005868 1.1e-34 150.6 139 50.4
Aa31LG10G14300 Aethionema arabicum HOM05D004886 ORTHO05D005868 2.1e-33 146.4 118 67.8
MD04G1140000 Malus domestica HOM05D004886 ORTHO05D005868 7.0e-29 131.3 103 66.0
Os10g0571100 Oryza sativa ssp. japonica HOM05D004886 ORTHO05D005868 1.2e-28 130.6 106 59.4
AUR62038597 Chenopodium quinoa HOM05D004886 ORTHO05D005868 7.7e-28 127.9 100 64.0
BraA05t19447Z Brassica rapa HOM05D004886 ORTHO05D005868 7.2e-26 121.3 74 75.7
BraA05t19448Z Brassica rapa HOM05D004886 ORTHO05D005868 7.2e-26 121.3 74 75.7
Sabra14G0139800 Salix brachista HOM05D004886 ORTHO05D005868 5.2e-24 115.2 68 83.8
AagrBONN_evm.TU.Sc2ySwM_344.1568 Anthoceros agrestis HOM05D004886 ORTHO05D005868 8.8e-24 114.4 112 43.8
CARHR170460 Cardamine hirsuta HOM05D004886 ORTHO05D005868 8.8e-24 114.4 84 72.6
Cre12.g496800 Chlamydomonas reinhardtii HOM05D004886 ORTHO05D005868 4.8e-22 108.6 106 41.5
Os03g0590700 Oryza sativa ssp. japonica HOM05D004886 ORTHO05D005868 8.2e-22 107.8 64 82.8
Cpa.g.c35192.2 Carica papaya HOM05D004886 ORTHO05D005868 4.1e-21 105.5 61 82.0
SMO364G0857 Selaginella moellendorffii HOM05D004886 ORTHO05D005868 1.2e-20 104.0 104 43.3
A05p04700 Brassica napus HOM05D004886 ORTHO05D005868 1.6e-20 103.6 65 73.8
CsaV3_5G024660 Cucumis sativus L. HOM05D004886 ORTHO05D005868 3.5e-20 102.4 106 55.7
ATR0049G020 Amborella trichopoda HOM05D004886 ORTHO05D005868 5.0e-19 98.6 66 71.2
CsaV3_3G022410 Cucumis sativus L. HOM05D004886 ORTHO05D005868 1.5e-18 97.1 93 55.9
MCO06G183 Micromonas commoda HOM05D004886 ORTHO05D005868 4.0e-16 89.0 106 40.6
PRCOL_00001209 Prasinoderma coloniale HOM05D004886 ORTHO05D005868 2.6e-15 86.3 111 38.7
Cc04_g01570 Coffea canephora HOM05D004886 ORTHO05D005868 5.7e-15 85.1 50 82.0
SEGI_24442 Sequoiadendron giganteum HOM05D004886 ORTHO05D005868 1.7e-14 83.6 87 44.8
FAN10G0867 Fragaria x ananassa HOM05D004886 ORTHO05D005868 3.7e-14 82.4 104 49.0
SalBow2G0716 Salvia bowleyana HOM05D000282 ORTHO05D000272 5.7e-07 58.5 32 90.6
Phvul.001G073900 Phaseolus vulgaris HOM05D004886 ORTHO05D005868 8.3e-06 54.7 36 75.0


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