Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 0.0e+00 1175.2 586 100.0
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 0.0e+00 1087.0 586 92.5
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 2.1e-231 805.8 598 72.2
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.1e-230 803.5 617 70.0
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 1.8e-225 786.2 585 70.6
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 6.3e-223 777.7 596 71.1
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 6.3e-223 777.7 599 70.1
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 6.3e-223 777.7 544 74.6
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.1e-222 776.9 572 73.3
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 1.4e-222 776.5 619 67.7
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 6.9e-222 774.2 584 69.3
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 7.7e-221 770.8 595 68.9
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 2.2e-220 769.2 579 73.1
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 8.5e-220 767.3 508 76.8
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.1e-219 766.9 618 68.1
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.1e-219 766.9 606 68.5
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 7.2e-219 764.2 596 68.5
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 2.1e-218 762.7 605 68.1
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 2.7e-218 762.3 611 67.1
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 7.9e-218 760.8 621 67.5
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 1.0e-217 760.4 539 73.5
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.5e-216 756.5 592 68.2
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 4.4e-216 755.0 619 68.0
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 4.4e-216 755.0 562 71.9
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 5.7e-216 754.6 608 67.8
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 5.7e-216 754.6 609 68.0
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 1.1e-214 750.4 605 67.8
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 6.9e-214 747.7 598 69.1
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 9.1e-214 747.3 411 88.8
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 2.0e-213 746.1 576 69.6
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 3.4e-213 745.3 597 66.5
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.7e-212 743.0 592 67.9
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 2.2e-212 742.7 609 66.2
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 7.2e-211 737.6 592 68.2
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 2.1e-210 736.1 597 66.7
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 4.7e-210 734.9 612 65.0
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.3e-209 732.6 623 65.3
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.0e-209 732.3 610 66.1
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 3.3e-208 728.8 603 67.5
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 3.3e-208 728.8 592 67.2
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 5.7e-208 728.0 600 66.8
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 7.4e-208 727.6 606 65.8
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 9.7e-208 727.2 605 66.1
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 1.7e-207 726.5 436 82.8
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 3.7e-207 725.3 552 70.1
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 6.3e-207 724.5 611 65.5
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 8.2e-207 724.2 439 82.7
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.4e-206 723.4 585 67.2
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 1.8e-206 723.0 506 75.1
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 7.0e-206 721.1 609 65.2
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 9.1e-206 720.7 615 64.7
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 2.6e-205 719.2 607 65.9
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 2.6e-205 719.2 591 65.7
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 4.5e-205 718.4 606 65.2
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 7.7e-205 717.6 599 65.9
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 1.0e-204 717.2 453 80.6
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 1.5e-203 713.4 604 65.7
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 1.5e-203 713.4 600 65.8
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 9.4e-203 710.7 600 65.3
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.2e-202 710.3 555 70.3
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 2.1e-202 709.5 559 66.7
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 3.6e-202 708.8 551 69.5
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 4.7e-202 708.4 642 62.5
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 6.1e-202 708.0 611 66.1
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 8.0e-202 707.6 599 66.4
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 1.8e-201 706.4 603 65.0
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 1.8e-201 706.4 503 73.4
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 6.7e-201 704.5 603 65.0
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 1.2e-200 703.7 599 65.9
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.2e-200 703.7 622 64.8
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 3.3e-200 702.2 491 73.7
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 5.7e-200 701.4 427 82.0
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.7e-199 699.9 524 70.6
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 1.7e-199 699.9 441 79.6
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 2.8e-199 699.1 561 67.6
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 8.2e-199 697.6 543 70.3
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 8.2e-199 697.6 624 62.7
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 1.1e-198 697.2 603 65.2
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.1e-198 697.2 607 64.3
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 4.1e-198 695.3 550 69.5
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 2.7e-197 692.6 427 81.0
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 3.5e-197 692.2 607 62.3
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 3.5e-197 692.2 529 68.1
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 1.7e-196 689.9 412 83.0
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 2.9e-196 689.1 407 83.5
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 3.8e-196 688.7 613 62.3
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 6.5e-196 688.0 606 61.9
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 2.5e-195 686.0 590 62.7
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 3.2e-195 685.6 618 62.9
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 4.2e-195 685.3 613 62.0
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 2.1e-194 682.9 623 59.9
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 2.1e-194 682.9 589 64.5
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 8.0e-194 681.0 543 66.5
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 1.0e-193 680.6 475 73.7
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 3.0e-193 679.1 612 61.8
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 4.0e-193 678.7 614 62.1
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 6.8e-193 677.9 590 61.7
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 1.5e-192 676.8 550 64.2
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.5e-192 676.8 498 68.9
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.0e-192 676.4 597 62.0
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 2.6e-192 676.0 605 62.8
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 5.7e-192 674.9 586 64.0
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 9.8e-192 674.1 590 61.5
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 1.3e-191 673.7 550 63.8
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 2.8e-191 672.5 553 64.4
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 4.8e-191 671.8 540 65.0
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 8.3e-191 671.0 586 61.9
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 1.1e-190 670.6 408 82.1
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 5.4e-190 668.3 586 60.9
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 2.0e-189 666.4 419 77.8
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 4.5e-189 665.2 457 73.1
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 4.5e-189 665.2 457 73.1
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 7.7e-189 664.5 600 61.0
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.2e-188 662.9 600 62.2
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 8.5e-188 661.0 451 73.8
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 1.1e-187 660.6 522 67.6
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.9e-187 659.8 601 62.1
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 1.9e-187 659.8 605 61.0
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 4.2e-187 658.7 549 64.5
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 4.2e-187 658.7 549 64.5
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 4.2e-187 658.7 549 64.5
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 4.2e-187 658.7 460 73.5
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 1.6e-186 656.8 599 61.1
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 2.2e-183 646.4 598 60.2
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 4.9e-183 645.2 403 78.4
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 1.1e-182 644.0 563 61.1
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 1.8e-182 643.3 472 70.6
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 1.0e-180 637.5 474 67.5
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 5.0e-180 635.2 549 65.0
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 6.6e-180 634.8 414 76.3
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 4.3e-179 632.1 607 58.0
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 4.0e-177 625.5 362 84.3
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 2.6e-176 622.9 554 62.8
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 1.4e-169 600.5 473 68.9
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 5.2e-161 572.0 595 57.8
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.4e-158 563.1 442 66.5
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 2.6e-152 543.1 437 64.3
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.1e-146 523.5 518 54.6
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.4e-145 520.8 356 71.3
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.2e-144 517.7 450 60.9
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.9e-142 510.4 376 71.0
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 9.9e-136 488.0 377 66.3
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 8.7e-132 474.9 304 74.7
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 1.0e-100 371.7 209 82.8
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 1.2e-96 358.2 402 48.3
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 7.7e-96 355.5 390 55.9
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 1.4e-94 351.3 197 82.7
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 1.4e-84 318.2 180 82.2
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.5e-78 298.1 159 87.4
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 3.2e-78 297.0 156 89.1
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 3.2e-78 297.0 156 89.1
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 5.2e-76 289.7 250 62.4
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.8e-65 254.6 484 37.8
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 1.3e-63 248.4 366 39.1
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 5.4e-57 226.5 173 68.2
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 4.9e-50 203.4 182 54.4
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 8.6e-47 192.6 143 71.3
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.3e-46 190.7 273 38.8
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 2.8e-45 187.6 187 54.5
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 5.2e-44 183.3 109 80.7
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.0e-35 154.8 110 67.3
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 9.9e-35 152.5 157 54.8
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.9e-34 151.0 88 80.7
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 4.6e-32 143.7 83 78.3
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 6.0e-32 143.3 128 59.4
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 6.6e-31 139.8 210 36.7
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 1.1e-30 139.0 99 69.7
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 5.6e-30 136.7 83 73.5
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 9.6e-22 109.4 120 51.7
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 2.4e-20 104.8 98 58.2
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 2.6e-19 101.3 234 39.7
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 7.1e-17 93.2 90 56.7
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 3.3e-14 84.3 175 34.3
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 1.8e-12 78.6 111 42.3
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 1.5e-11 75.5 40 90.0
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 2.9e-10 71.2 57 70.2
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 6.0e-08 63.5 149 36.2
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 1.9e-06 58.5 32 78.1


User provided reference genes

Program Settings