Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 7.0e-44 181.8 271 100.0
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.0e-22 110.5 284 60.9
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 9.2e-20 101.7 194 67.5
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.1e-19 100.5 96 68.8
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 2.1e-19 100.5 95 66.3
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.7e-19 100.1 185 74.1
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 4.6e-19 99.4 96 64.6
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 1.0e-18 98.2 184 74.5
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 3.9e-18 96.3 96 67.7
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 6.6e-18 95.5 161 72.7
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.1e-17 94.7 101 60.4
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.5e-17 93.6 95 64.2
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 7.3e-17 92.0 185 55.7
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.2e-16 91.3 96 56.2
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.6e-16 90.9 95 62.1
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 3.6e-16 89.7 96 68.8
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 3.6e-16 89.7 74 70.3
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 4.7e-16 89.4 186 70.4
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 6.2e-16 89.0 96 61.5
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 6.2e-16 89.0 96 61.5
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 2.4e-15 87.0 72 72.2
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 5.3e-15 85.9 96 64.6
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 6.9e-15 85.5 96 57.3
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 6.9e-15 85.5 74 66.2
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 6.9e-15 85.5 74 70.3
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 6.9e-15 85.5 74 70.3
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 1.2e-14 84.7 102 55.9
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 1.2e-14 84.7 74 70.3
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 1.2e-14 84.7 184 62.0
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 3.4e-14 83.2 185 48.1
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 4.4e-14 82.8 96 57.3
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 4.4e-14 82.8 74 67.6
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 7.6e-14 82.0 185 68.6
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 7.6e-14 82.0 184 54.3
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 9.9e-14 81.6 185 69.2
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 1.3e-13 81.3 185 70.3
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 1.3e-13 81.3 105 60.0
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 1.3e-13 81.3 185 70.3
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.7e-13 80.9 97 62.9
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 2.2e-13 80.5 72 62.5
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.9e-13 80.1 96 55.2
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.9e-13 80.1 105 58.1
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 3.8e-13 79.7 70 65.7
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 3.8e-13 79.7 96 55.2
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 4.9e-13 79.3 105 57.1
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 6.4e-13 79.0 185 68.1
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 8.4e-13 78.6 185 67.0
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 8.4e-13 78.6 70 65.7
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 1.1e-12 78.2 70 62.9
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 1.4e-12 77.8 71 63.4
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 1.4e-12 77.8 184 70.1
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 1.4e-12 77.8 74 63.5
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 3.2e-12 76.6 68 64.7
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 3.2e-12 76.6 186 68.8
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 4.2e-12 76.3 163 73.0
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 5.4e-12 75.9 184 67.9
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 5.4e-12 75.9 82 65.9
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.2e-11 74.7 96 61.5
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.6e-11 74.3 96 59.4
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.7e-11 73.6 69 63.8
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 3.5e-11 73.2 185 66.5
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 4.6e-11 72.8 74 55.4
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 6.0e-11 72.4 105 55.2
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 1.0e-10 71.6 185 68.1
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 1.0e-10 71.6 72 59.7
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 1.0e-10 71.6 185 66.5
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 1.0e-10 71.6 185 71.9
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 1.7e-10 70.9 93 55.9
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 1.7e-10 70.9 74 58.1
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 3.0e-10 70.1 185 66.5
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 3.9e-10 69.7 82 62.2
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.9e-10 69.7 96 54.2
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 5.1e-10 69.3 96 53.1
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.1e-09 68.2 96 56.2
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 1.1e-09 68.2 162 72.8
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.5e-09 67.0 87 51.7
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 3.3e-09 66.6 96 55.2
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 4.3e-09 66.2 185 63.8
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 4.3e-09 66.2 96 55.2
Nn1g08766 Nelumbo nucifera HOM05D003347 ORTHO05D003821 5.6e-09 65.9 104 57.7
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 9.6e-09 65.1 87 44.8
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 1.3e-08 64.7 96 53.1
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 1.6e-08 64.3 185 63.2
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 1.6e-08 64.3 71 50.7
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 1.6e-08 64.3 186 59.1
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 2.8e-08 63.5 74 56.8
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 2.8e-08 63.5 56 64.3
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 2.8e-08 63.5 186 62.4
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 2.8e-08 63.5 70 48.6
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 3.6e-08 63.2 160 59.4
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 4.8e-08 62.8 94 45.7
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 8.1e-08 62.0 96 50.0
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 8.1e-08 62.0 97 54.6
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 1.1e-07 61.6 72 54.2
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.1e-07 61.6 72 51.4
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 1.4e-07 61.2 90 52.2
FAN19G3034 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.4e-07 61.2 73 49.3
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 1.4e-07 61.2 96 47.9
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 1.4e-07 61.2 87 48.3
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 3.1e-07 60.1 96 51.0
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 4.0e-07 59.7 96 43.8
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 4.0e-07 59.7 159 69.2
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 4.0e-07 59.7 89 46.1
Os10g0214400 Oryza sativa ssp. japonica HOM05D003347 ORTHO05D003821 5.3e-07 59.3 77 51.9
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 5.3e-07 59.3 96 44.8
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 6.9e-07 58.9 160 70.0
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 6.9e-07 58.9 96 52.1
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 9.0e-07 58.5 96 49.0
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 1.2e-06 58.2 45 71.1
SEGI_15810 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 1.2e-06 58.2 85 49.4
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.2e-06 58.2 74 51.4
Sopen05g034850 Solanum pennellii HOM05D003347 ORTHO05D003821 1.5e-06 57.8 95 51.6
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 2.0e-06 57.4 69 46.4
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 2.0e-06 57.4 74 50.0
Duzib248G0125 Durio zibethinus HOM05D003347 ORTHO05D003821 2.6e-06 57.0 91 53.8
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 3.4e-06 56.6 96 51.0
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 3.4e-06 56.6 70 48.6
Sabra19G0015000 Salix brachista HOM05D003347 ORTHO05D003821 3.4e-06 56.6 51 58.8
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 4.5e-06 56.2 72 52.8
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 4.5e-06 56.2 95 43.2
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 7.6e-06 55.5 160 67.5
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 9.9e-06 55.1 74 50.0
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 9.9e-06 55.1 74 50.0
CARHR200100 Cardamine hirsuta HOM05D012923 ORTHO05D014747 9.9e-06 55.1 56 50.0
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 9.9e-06 55.1 74 47.3
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 9.9e-06 55.1 44 65.9


User provided reference genes

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