Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 8.3e-179 630.2 302 100.0
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 2.7e-161 572.0 302 91.1
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 5.0e-123 444.9 303 69.0
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 8.5e-123 444.1 301 68.8
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 8.5e-123 444.1 301 68.8
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 3.6e-121 438.7 303 68.3
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 1.8e-120 436.4 303 68.0
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 4.3e-119 431.8 303 67.7
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 4.3e-119 431.8 302 67.9
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 1.7e-118 429.9 301 68.1
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 4.8e-118 428.3 301 66.4
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 6.3e-118 427.9 300 68.3
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 8.2e-118 427.6 301 66.8
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 8.2e-118 427.6 302 67.2
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 1.2e-116 423.7 306 68.6
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.5e-116 423.3 301 66.1
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 7.7e-116 421.0 273 70.3
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 7.7e-116 421.0 303 65.3
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 7.7e-116 421.0 301 65.4
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.0e-115 420.6 305 64.9
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 1.0e-115 420.6 305 64.9
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.0e-115 420.6 301 65.4
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 2.2e-115 419.5 276 68.1
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 2.9e-115 419.1 303 64.4
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 6.5e-115 417.9 293 65.5
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 8.5e-115 417.5 302 65.6
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.1e-114 417.2 305 64.6
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.5e-114 416.0 302 65.6
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 9.4e-114 414.1 303 63.7
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 9.4e-114 414.1 302 65.2
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 9.4e-114 414.1 304 64.8
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.6e-113 413.3 302 64.9
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 1.6e-113 413.3 302 64.6
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 1.6e-113 413.3 304 63.2
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 2.1e-113 412.9 305 63.6
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.1e-113 412.9 302 65.2
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 2.7e-113 412.5 312 63.8
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 3.6e-113 412.1 293 64.2
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 7.9e-113 411.0 271 70.1
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 7.9e-113 411.0 306 63.7
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.0e-112 410.6 293 64.8
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 1.0e-112 410.6 302 64.9
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.4e-112 410.2 302 64.2
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 1.8e-112 409.8 293 64.8
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 1.8e-112 409.8 302 63.2
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 1.8e-112 409.8 302 65.2
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 2.3e-112 409.5 293 64.8
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 3.0e-112 409.1 312 63.5
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 3.0e-112 409.1 270 69.6
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 5.1e-112 408.3 299 64.5
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 4.4e-111 405.2 303 63.7
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 3.7e-110 402.1 275 67.3
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 4.8e-110 401.7 279 65.2
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 6.3e-110 401.4 274 68.2
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 6.3e-110 401.4 303 62.7
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.4e-109 400.2 293 62.8
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.8e-109 399.8 305 62.3
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.1e-109 398.7 291 64.6
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 4.1e-109 398.7 274 66.4
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 7.0e-109 397.9 273 67.0
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 9.1e-109 397.5 273 66.3
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 1.2e-108 397.1 303 61.1
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 5.9e-108 394.8 304 60.5
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 2.2e-107 392.9 304 61.2
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 5.0e-107 391.7 277 65.3
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 2.3e-104 382.9 297 60.9
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 3.0e-104 382.5 301 59.1
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 8.8e-104 380.9 303 60.7
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 1.1e-103 380.6 278 63.7
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 1.1e-101 374.0 280 63.9
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 3.1e-101 372.5 270 63.7
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 4.1e-101 372.1 320 57.5
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 2.0e-100 369.8 303 59.7
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 7.2e-98 361.3 303 56.1
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 2.7e-97 359.4 292 58.9
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 6.1e-97 358.2 278 59.4
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 2.3e-96 356.3 244 66.0
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 2.3e-96 356.3 308 58.1
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 1.3e-94 350.5 306 55.6
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 8.3e-94 347.8 284 59.2
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 1.8e-93 346.7 293 57.7
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 4.1e-93 345.5 263 63.1
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 7.0e-93 344.7 300 55.3
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 2.7e-92 342.8 270 62.6
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 5.9e-92 341.7 320 54.1
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 5.0e-91 338.6 321 53.0
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 8.0e-89 331.3 239 65.3
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 1.8e-88 330.1 278 56.5
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 3.0e-88 329.3 292 54.8
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 5.2e-88 328.6 278 56.1
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 1.5e-87 327.0 229 65.1
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 1.4e-85 320.5 336 50.9
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 1.0e-80 304.3 213 63.4
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 3.0e-80 302.8 319 52.4
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 2.4e-77 293.1 276 51.8
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 2.0e-76 290.0 277 52.0
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 5.9e-76 288.5 254 54.7
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 2.8e-73 279.6 190 68.4
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 2.2e-70 270.0 190 68.4
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.4e-69 267.3 276 47.5
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 1.4e-69 267.3 189 66.1
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 1.9e-69 266.9 216 57.4
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 2.3e-64 250.0 274 44.9
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 9.8e-63 244.6 178 63.5
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 1.7e-62 243.8 252 46.4
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 4.6e-60 235.7 190 60.0
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 3.9e-59 232.6 312 41.0
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 1.1e-58 231.1 305 40.3
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.7e-54 217.2 190 56.3
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 7.1e-53 211.8 279 42.7
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 2.3e-51 206.8 190 53.2
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 6.6e-51 205.3 205 53.7
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 1.9e-50 203.8 185 56.2
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 3.6e-49 199.5 281 40.6
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 6.8e-48 195.3 192 51.6
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 1.5e-47 194.1 309 34.6
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 3.4e-47 193.0 317 34.4
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 4.4e-47 192.6 282 38.7
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 1.3e-43 181.0 117 69.2
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 6.6e-43 178.7 126 67.5
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 1.1e-40 171.4 134 61.2
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.4e-40 171.0 164 55.5
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 6.9e-40 168.7 127 61.4
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 1.2e-39 167.9 271 37.6
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 3.4e-39 166.4 270 37.0
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 2.1e-36 157.1 119 59.7
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 7.9e-36 155.2 220 39.5
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 6.6e-35 152.1 119 60.5
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 7.4e-34 148.7 119 54.6
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 9.6e-34 148.3 123 57.7
VMungo0331G1881 Vigna mungo HOM05D000590 ORTHO05D006825 1.5e-31 141.0 111 59.5
Lalb_Chr10g0100501 Lupinus albus HOM05D000590 ORTHO05D006825 2.9e-30 136.7 106 62.3
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 2.4e-29 133.7 106 59.4
GSVIVG01027101001 Vitis vinifera HOM05D000590 ORTHO05D006825 8.7e-27 125.2 95 62.1
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 3.3e-26 123.2 131 45.0
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 9.3e-21 105.1 63 74.6
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 2.7e-20 103.6 76 59.2
Sabra02G0141900 Salix brachista HOM05D000590 ORTHO05D006825 5.7e-18 95.9 178 36.5
SHI13292 Sapria himalayana HOM05D000590 ORTHO05D006825 4.1e-16 89.7 73 58.9
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 6.9e-16 89.0 65 63.1
GSVIVG01027108001 Vitis vinifera HOM05D000590 ORTHO05D006825 5.9e-15 85.9 63 60.3
BcaC02g10248 Brassica carinata HOM05D000590 ORTHO05D006825 7.6e-15 85.5 55 56.4
unitig_747.g21341 Utricularia gibba HOM05D000590 ORTHO05D006825 7.2e-13 79.0 60 63.3
Zm00001eb119810 Zea mays HOM05D000590 ORTHO05D006825 1.3e-11 74.7 85 45.9
Zm00001eb197190 Zea mays HOM05D002169 ORTHO05D023180 3.0e-11 73.6 112 33.9
TWI23G0685 Tripterygium wilfordii HOM05D000354 ORTHO05D000717 5.3e-08 62.8 31 87.1
SHI13293 Sapria himalayana HOM05D000590 ORTHO05D006825 2.9e-06 57.0 32 65.6


User provided reference genes

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