Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 9.7e-242 839.7 425 100.0
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 3.4e-226 788.1 425 92.2
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 3.8e-222 774.6 425 90.8
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 3.8e-222 774.6 425 90.8
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.5e-221 772.7 425 90.6
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 2.5e-221 771.9 425 89.6
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.2e-220 769.6 425 90.4
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 1.2e-220 769.6 425 89.6
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 2.8e-220 768.5 423 90.1
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 2.8e-220 768.5 425 89.9
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 1.0e-219 766.5 425 88.7
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 1.0e-219 766.5 425 89.4
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 1.0e-219 766.5 424 89.2
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 8.9e-219 763.5 425 88.9
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 2.0e-218 762.3 425 88.7
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 4.4e-218 761.1 425 88.0
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 1.3e-217 759.6 425 87.8
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 2.2e-217 758.8 425 87.8
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 8.3e-217 756.9 425 87.5
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 1.4e-216 756.1 425 87.3
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 2.4e-216 755.4 425 87.5
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 4.1e-216 754.6 425 86.1
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 7.0e-216 753.8 425 88.2
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 1.2e-215 753.1 425 86.1
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 1.6e-215 752.7 425 85.9
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 1.6e-215 752.7 425 87.5
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 3.5e-215 751.5 417 89.2
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 7.8e-215 750.4 415 89.4
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 1.7e-214 749.2 425 86.6
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 3.0e-214 748.4 425 87.1
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 2.5e-213 745.3 425 86.8
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.5e-213 745.3 424 85.4
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 2.5e-213 745.3 449 84.2
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 2.5e-213 745.3 422 87.2
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 4.3e-213 744.6 423 85.6
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 4.3e-213 744.6 425 85.6
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 5.6e-213 744.2 425 86.1
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 9.5e-213 743.4 425 86.1
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 9.5e-213 743.4 424 85.4
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 1.2e-212 743.0 425 84.7
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 2.1e-212 742.3 421 86.7
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 2.8e-212 741.9 425 85.6
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 6.2e-212 740.7 423 85.1
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.1e-211 740.0 424 84.9
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 1.1e-211 740.0 425 84.7
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 1.1e-211 740.0 425 84.9
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 1.4e-211 739.6 425 85.9
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 1.4e-211 739.6 425 84.7
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 2.3e-211 738.8 425 85.2
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 5.2e-211 737.6 425 85.9
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 1.2e-210 736.5 425 85.4
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 1.2e-210 736.5 424 84.9
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 1.2e-210 736.5 425 84.0
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 2.6e-210 735.3 425 85.2
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 3.4e-210 734.9 425 84.9
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 3.4e-210 734.9 425 85.2
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 3.4e-210 734.9 425 85.2
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 5.8e-210 734.2 423 85.3
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 7.5e-210 733.8 425 84.9
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 7.5e-210 733.8 425 83.5
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 7.5e-210 733.8 425 84.7
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 2.2e-209 732.3 425 85.4
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 2.2e-209 732.3 425 85.2
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 2.9e-209 731.9 425 85.6
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 3.7e-209 731.5 425 85.4
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 3.7e-209 731.5 425 84.7
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 3.7e-209 731.5 425 84.7
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 3.7e-209 731.5 425 84.5
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.7e-209 731.5 438 82.4
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 4.9e-209 731.1 471 80.3
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 1.4e-208 729.6 425 84.2
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 2.4e-208 728.8 425 84.5
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.1e-208 728.0 414 86.0
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 4.1e-208 728.0 426 84.7
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 7.0e-208 727.2 420 85.2
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 9.2e-208 726.9 420 85.2
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 2.0e-207 725.7 425 83.8
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 2.7e-207 725.3 426 84.0
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 1.0e-206 723.4 425 82.6
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 1.0e-206 723.4 426 83.8
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 1.7e-206 722.6 425 83.1
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 2.3e-206 722.2 438 82.6
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 3.0e-206 721.8 425 84.5
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 8.6e-206 720.3 423 84.2
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 5.6e-205 717.6 415 84.8
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 3.1e-203 711.8 425 82.4
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 6.8e-203 710.7 413 85.5
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 3.4e-202 708.4 425 82.8
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 3.7e-201 704.9 424 80.9
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 4.9e-201 704.5 425 80.7
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 9.2e-200 700.3 425 80.0
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.7e-199 698.7 425 79.5
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 4.6e-199 698.0 425 84.0
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 4.6e-199 698.0 426 79.8
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 3.9e-198 694.9 420 81.4
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 4.0e-195 684.9 423 79.4
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 1.5e-194 682.9 423 79.2
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 2.6e-194 682.2 425 81.4
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 8.4e-193 677.2 425 80.2
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.7e-190 669.5 419 78.0
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 6.6e-190 667.5 425 78.4
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 1.9e-189 666.0 423 75.9
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 3.3e-189 665.2 425 78.6
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 5.2e-187 657.9 423 75.4
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.3e-185 653.3 425 77.6
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 1.4e-184 649.8 423 74.9
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 3.2e-184 648.7 433 76.9
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 2.7e-183 645.6 442 74.9
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 1.7e-182 642.9 416 76.7
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 3.9e-182 641.7 423 73.5
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.1e-181 640.2 415 78.1
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 1.1e-181 640.2 413 78.2
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 1.5e-181 639.8 420 73.1
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 7.3e-181 637.5 418 76.3
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 1.3e-180 636.7 423 75.7
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 1.3e-180 636.7 402 80.3
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 4.8e-180 634.8 475 70.9
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.4e-179 633.3 416 74.5
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 1.4e-179 633.3 611 57.3
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 3.4e-178 628.6 423 72.3
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 3.2e-176 622.1 364 83.8
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.2e-176 621.7 413 73.6
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.2e-176 621.7 406 74.6
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 5.6e-173 611.3 411 73.2
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.1e-172 609.4 413 74.1
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 4.8e-172 608.2 425 69.9
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 5.3e-171 604.7 353 81.6
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 2.9e-169 599.0 339 85.5
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 3.8e-169 598.6 344 84.6
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 7.1e-168 594.3 340 86.8
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 9.3e-168 594.0 410 72.0
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 1.2e-167 593.6 357 82.4
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 2.7e-167 592.4 430 69.3
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 2.4e-163 579.3 432 68.3
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.4e-160 570.1 412 67.5
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 7.1e-160 567.8 415 71.1
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 4.3e-157 558.5 415 64.8
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 3.1e-155 552.4 314 86.9
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.4e-150 537.0 399 67.2
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 1.8e-147 526.6 303 84.2
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 8.8e-142 507.7 422 60.7
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.6e-141 506.1 413 63.9
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 3.0e-134 482.6 282 82.3
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 4.5e-130 468.8 286 78.7
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 3.2e-128 462.6 442 56.3
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 4.7e-127 458.8 436 55.7
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 3.7e-116 422.5 237 87.8
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 4.1e-115 419.1 431 51.3
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 8.3e-108 394.8 252 77.0
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 1.4e-102 377.5 433 48.5
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 2.1e-90 337.0 465 43.7
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 1.4e-86 324.3 171 92.4
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 4.0e-86 322.8 199 81.4
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 2.1e-79 300.4 412 41.5
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 4.7e-71 272.7 155 81.3
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 5.3e-70 269.2 168 77.4
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 9.0e-70 268.5 239 59.4
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 1.0e-65 255.0 166 74.1
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 2.7e-58 230.3 253 53.4
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 2.5e-56 223.8 158 73.4
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 3.3e-56 223.4 161 68.3
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 1.0e-36 158.7 96 79.2
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 1.1e-30 138.7 86 76.7
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 1.8e-30 137.9 86 75.6
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 8.5e-28 129.0 126 57.9
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 6.1e-26 122.9 231 36.8
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 4.8e-23 113.2 72 77.8
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 1.5e-21 108.2 61 83.6
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 3.8e-20 103.6 129 48.1
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 7.2e-19 99.4 55 80.0
Medtr4g065940 Medicago truncatula HOM05D003847 ORTHO05D004976 2.1e-18 97.8 95 57.9
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 1.3e-15 88.6 168 36.9
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 4.8e-15 86.7 55 70.9
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 1.4e-14 85.1 230 30.0
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 2.0e-13 81.3 48 81.2
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 1.2e-10 72.0 47 74.5
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 1.4e-09 68.6 105 38.1
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 1.8e-09 68.2 81 43.2
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 1.2e-08 65.5 42 71.4
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 3.4e-08 63.9 38 78.9
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 3.4e-08 63.9 32 84.4
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 5.7e-08 63.2 44 65.9
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 1.8e-06 58.2 30 83.3


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