Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0537 Tripterygium wilfordii HOM05D007421 ORTHO05D009203 6.5e-182 640.6 319 100.0
Manes.11G148500 Manihot esculenta HOM05D007421 ORTHO05D009203 7.0e-51 205.3 332 44.0
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 4.5e-42 176.0 352 39.2
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 7.7e-42 175.3 352 38.9
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 1.2e-39 167.9 366 37.4
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 1.1e-35 154.8 329 38.3
Cfa005578 Carpinus fangiana HOM05D007421 ORTHO05D009203 2.0e-34 150.6 294 41.5
CiPaw.06G151100 Carya illinoinensis HOM05D007421 ORTHO05D009203 2.0e-34 150.6 303 39.6
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 2.0e-34 150.6 320 38.1
Potri.005G176900 Populus trichocarpa HOM05D007421 ORTHO05D009203 5.9e-34 149.1 320 37.5
Rhsim11G0134600 Rhododendron simsii HOM05D007421 ORTHO05D009203 2.3e-33 147.1 364 36.0
Cpa.g.sc0.12 Carica papaya HOM05D007421 ORTHO05D009203 2.5e-32 143.7 372 34.4
vmacro01809 Vaccinium macrocarpon HOM05D007421 ORTHO05D009203 1.2e-31 141.4 372 34.1
Sabra05G0133500 Salix brachista HOM05D007421 ORTHO05D009203 2.1e-31 140.6 326 35.9
Gorai.013G063400 Gossypium raimondii HOM05D007421 ORTHO05D009203 2.8e-31 140.2 304 37.2
ClCG09G021300 Citrullus lanatus HOM05D007421 ORTHO05D009203 4.7e-31 139.4 332 36.4
Gohir.A13G065600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 8.0e-31 138.7 302 38.4
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 3.1e-30 136.7 315 38.7
Nn5g28883 Nelumbo nucifera HOM05D007421 ORTHO05D009203 6.8e-30 135.6 293 36.5
Thecc.02G143500 Theobroma cacao HOM05D007421 ORTHO05D009203 1.5e-29 134.4 326 35.6
TAR628G0675 Trochodendron aralioides HOM05D007421 ORTHO05D009203 2.0e-29 134.0 304 36.5
Ca_18335_v3 Cicer arietinum L. HOM05D007421 ORTHO05D009203 2.6e-29 133.7 320 35.9
Nitab4.5_0000078g0170 Nicotiana tabacum HOM05D007421 ORTHO05D009203 2.6e-29 133.7 292 36.3
Nitab4.5_0011639g0020 Nicotiana tabacum HOM05D007421 ORTHO05D009203 4.4e-29 132.9 291 37.8
Sed0000945 Sechium edule HOM05D007421 ORTHO05D009203 7.5e-29 132.1 316 35.8
Gohir.A03G171600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 2.2e-28 130.6 328 33.8
Gorai.005G217800 Gossypium raimondii HOM05D007421 ORTHO05D009203 2.9e-28 130.2 337 34.1
CAN.G1034.36 Capsicum annuum HOM05D007421 ORTHO05D009203 8.3e-28 128.6 301 35.5
EL10Ac8g19356 Beta vulgaris HOM05D007421 ORTHO05D009203 4.1e-27 126.3 303 36.0
DCAR_029217 Daucus carota HOM05D007421 ORTHO05D009203 4.1e-27 126.3 337 34.4
Sopen10g016990 Solanum pennellii HOM05D007421 ORTHO05D009203 4.1e-27 126.3 357 33.1
Atru.chr6.906 Acer truncatum HOM05D007421 ORTHO05D009203 7.0e-27 125.6 260 38.1
Solyc10g047040.3 Solanum lycopersicum HOM05D007421 ORTHO05D009203 7.0e-27 125.6 357 33.1
CsaV3_7G012710 Cucumis sativus L. HOM05D007421 ORTHO05D009203 4.6e-26 122.9 328 33.2
QL11p019404 Quercus lobata HOM05D007421 ORTHO05D009203 4.6e-26 122.9 261 39.5
TPR.G10446 Trifolium pratense HOM05D007421 ORTHO05D009203 7.8e-26 122.1 313 35.5
Lj4g0022412 Lotus japonicus HOM05D007421 ORTHO05D009203 1.0e-25 121.7 327 33.6
Peaxi162Scf00003g03742 Petunia axillaris HOM05D007421 ORTHO05D009203 1.0e-25 121.7 312 34.0
Psat7g097480 Pisum sativum HOM05D007421 ORTHO05D009203 1.3e-25 121.3 323 34.1
Gohir.D13G056100 Gossypium hirsutum HOM05D007421 ORTHO05D009203 2.3e-25 120.6 220 39.1
Nitab4.5_0004176g0040 Nicotiana tabacum HOM05D007421 ORTHO05D009203 3.9e-25 119.8 292 33.2
PGSC0003DMG400024171 Solanum tuberosum HOM05D007421 ORTHO05D009203 1.6e-23 114.4 292 33.6
Oeu000232.1 Olea europaea HOM05D007421 ORTHO05D009203 6.2e-23 112.5 353 34.0
Haze_09992 Corylus avellana HOM05D003963 ORTHO05D004558 8.1e-23 112.1 261 39.5
Aqoxy5G02013 Aquilegia oxysepala HOM05D007421 ORTHO05D009203 1.4e-22 111.3 311 36.0
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 1.2e-21 108.2 357 34.5
Sc08g0004770 Simmondsia chinensis HOM05D007421 ORTHO05D009203 4.4e-21 106.3 350 31.4
Medtr4g094292 Medicago truncatula HOM05D007421 ORTHO05D009203 7.5e-21 105.5 321 32.7
Prupe.1G559900 Prunus persica HOM05D007421 ORTHO05D009203 1.3e-20 104.8 318 33.3
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 2.9e-20 103.6 252 38.1
Glyma.08G075000 Glycine max HOM05D007421 ORTHO05D009203 1.9e-19 100.9 321 32.7
Potri.002G084750 Populus trichocarpa HOM05D007421 ORTHO05D009203 3.2e-19 100.1 309 33.0
Ciclev10003479m.g Citrus clementina HOM05D007421 ORTHO05D009203 4.1e-19 99.8 327 33.0
MD08G1222100 Malus domestica HOM05D007421 ORTHO05D009203 4.1e-19 99.8 228 39.5
RcHm_v2.0_Chr7g0225501 Rosa chinensis HOM05D007421 ORTHO05D009203 9.2e-19 98.6 294 36.1
VMungo0251G1640 Vigna mungo HOM05D007421 ORTHO05D009203 1.6e-18 97.8 337 31.8
Phvul.002G206600 Phaseolus vulgaris HOM05D007421 ORTHO05D009203 2.1e-18 97.4 321 34.3
Lj9C318G13 Lonicera japonica HOM05D007421 ORTHO05D009203 7.8e-18 95.5 209 37.3
FAN18G4438 Fragaria x ananassa HOM05D007421 ORTHO05D009203 1.3e-17 94.7 276 33.7
DCAR_001801 Daucus carota HOM05D007421 ORTHO05D009203 2.3e-17 94.0 146 46.6
Gohir.D02G194950 Gossypium hirsutum HOM05D007421 ORTHO05D009203 5.1e-17 92.8 319 31.0
FvH4_5g30620 Fragaria vesca HOM05D007421 ORTHO05D009203 3.3e-16 90.1 276 32.6
Ah.09g232060 Amaranthus hybridus HOM05D007421 ORTHO05D009203 9.5e-16 88.6 317 32.5
FAN04G0435 Fragaria x ananassa HOM05D007421 ORTHO05D009203 1.2e-13 81.6 276 31.9
SGA_v2.0_scaffold332G48944 Striga asiatica HOM05D007421 ORTHO05D009203 2.6e-13 80.5 324 31.2
Glyma.05G120200 Glycine max HOM05D007421 ORTHO05D009203 4.4e-13 79.7 316 30.1
MBI07_g32548_MAGBIO Magnolia biondii HOM05D007421 ORTHO05D009203 4.4e-13 79.7 157 42.0
ECA236G4083 Erigeron canadensis HOM05D007421 ORTHO05D009203 5.8e-13 79.3 296 30.4
CDE02G3538 Ceratophyllum demersum HOM05D007421 ORTHO05D009203 9.9e-13 78.6 163 36.8
CANSAT11G0077 Cannabis sativa HOM05D007421 ORTHO05D009203 2.2e-12 77.4 302 29.5
HPP92_013365 Vanilla planifolia HOM05D007421 ORTHO05D009203 4.9e-12 76.3 273 32.2
RcHm_v2.0_Chr5g0049711 Rosa chinensis HOM05D007421 ORTHO05D009203 1.7e-09 67.8 179 34.6
RcHm_v2.0_Chr7g0236151 Rosa chinensis HOM05D007421 ORTHO05D009203 2.3e-09 67.4 172 36.0
GSVIVG01022264001 Vitis vinifera HOM05D007421 ORTHO05D009203 8.6e-09 65.5 127 38.6
Migut.B00638 Erythranthe guttata HOM05D007421 ORTHO05D009203 1.9e-08 64.3 224 31.2
Eucgr.I02692 Eucalyptus grandis HOM05D007421 ORTHO05D009203 2.5e-08 63.9 326 27.6
ATR0753G155 Amborella trichopoda HOM05D007421 ORTHO05D009203 5.6e-08 62.8 94 45.7
Medtr4g094298 Medicago truncatula HOM05D007421 ORTHO05D009203 2.8e-07 60.5 59 55.9
SHI16534 Sapria himalayana HOM05D007421 ORTHO05D009203 1.4e-06 58.2 134 30.6
Lalb_Chr12g0208511 Lupinus albus HOM05D007421 ORTHO05D009203 5.2e-06 56.2 52 53.8
RcHm_v2.0_Chr0c11g0499381 Rosa chinensis HOM05D007421 ORTHO05D009203 6.8e-06 55.8 74 48.6


User provided reference genes

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