Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 1.9e-133 479.2 238 100.0
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 1.7e-118 429.5 232 91.4
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 9.3e-117 423.7 232 89.2
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 2.1e-116 422.5 231 90.0
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 3.0e-115 418.7 232 88.4
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 3.9e-115 418.3 231 89.6
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 3.9e-115 418.3 236 89.4
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 3.9e-115 418.3 233 87.6
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 5.1e-115 417.9 236 87.3
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.5e-114 415.6 231 88.3
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 4.3e-114 414.8 231 87.9
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 5.7e-114 414.5 227 90.7
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 7.4e-114 414.1 231 87.0
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 1.3e-113 413.3 222 91.9
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 1.6e-113 412.9 231 89.2
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 1.6e-113 412.9 234 86.3
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 2.2e-113 412.5 231 89.2
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 2.8e-113 412.1 231 88.3
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 6.3e-113 411.0 235 88.9
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 6.3e-113 411.0 229 87.8
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 8.2e-113 410.6 238 86.1
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.4e-112 409.8 225 88.9
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 2.4e-112 409.1 226 88.9
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 2.4e-112 409.1 231 87.4
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 6.9e-112 407.5 238 85.7
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 9.0e-112 407.1 225 87.6
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 9.0e-112 407.1 242 84.7
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 7.6e-111 404.1 238 84.9
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 7.6e-111 404.1 225 88.9
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 5.0e-110 401.4 247 82.6
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 6.5e-110 401.0 245 83.3
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 3.2e-109 398.7 231 84.0
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 4.2e-109 398.3 237 85.7
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 9.4e-109 397.1 231 84.4
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 1.6e-108 396.4 226 86.7
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 1.6e-108 396.4 230 85.7
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 3.6e-108 395.2 232 86.2
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 4.6e-108 394.8 235 81.3
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 4.6e-108 394.8 235 81.3
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 6.1e-108 394.4 225 87.1
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 6.1e-108 394.4 233 85.0
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 7.9e-108 394.0 247 81.0
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 7.9e-108 394.0 247 81.0
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 7.9e-108 394.0 231 84.4
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 7.9e-108 394.0 229 84.7
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 6.7e-107 391.0 230 85.2
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 8.8e-107 390.6 222 87.4
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.9e-106 389.4 231 83.5
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 2.5e-106 389.0 238 81.5
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 4.3e-106 388.3 231 83.1
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 4.3e-106 388.3 231 83.1
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 6.3e-105 384.4 235 81.7
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 2.4e-104 382.5 222 85.6
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 3.1e-104 382.1 221 84.2
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 5.3e-104 381.3 236 80.1
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 1.2e-103 380.2 242 78.5
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 2.0e-103 379.4 246 80.5
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 1.0e-102 377.1 230 83.0
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 1.7e-102 376.3 235 81.7
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.7e-102 376.3 230 82.2
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.7e-102 376.3 230 82.2
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 6.5e-102 374.4 236 80.1
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 2.7e-100 369.0 228 82.9
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 3.6e-100 368.6 234 77.8
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 7.9e-100 367.5 234 79.5
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 3.3e-98 362.1 236 75.0
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 5.7e-98 361.3 261 71.6
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 3.7e-97 358.6 201 88.6
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 8.2e-97 357.5 235 75.7
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 4.1e-96 355.1 232 79.3
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.2e-95 353.6 232 73.7
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.0e-95 352.8 232 78.9
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 2.6e-95 352.4 235 74.0
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 5.9e-95 351.3 237 74.7
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 2.2e-94 349.4 232 72.4
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 2.5e-93 345.9 230 77.4
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 5.2e-91 338.2 249 72.7
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 2.2e-89 332.8 249 71.9
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 1.4e-88 330.1 199 81.4
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 3.1e-88 328.9 199 82.4
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.5e-87 325.5 232 75.0
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 4.0e-83 312.0 174 87.9
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 2.0e-82 309.7 195 79.5
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 4.1e-80 302.0 233 67.0
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.2e-76 290.4 222 69.8
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 2.3e-75 286.2 246 63.0
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 8.6e-70 267.7 224 61.6
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.2e-66 257.3 140 87.9
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 4.5e-63 245.4 139 86.3
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.3e-61 239.2 155 76.1
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 2.1e-60 236.5 219 52.5
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 3.1e-59 232.6 239 53.1
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 8.3e-57 224.6 219 53.0
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 7.0e-56 221.5 152 72.4
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 4.6e-31 139.0 82 80.5
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 4.9e-25 119.0 222 33.8
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 1.3e-17 94.4 121 52.9
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 3.1e-11 73.2 57 63.2
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 1.0e-06 58.2 45 66.7


User provided reference genes

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