Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0403 Tripterygium wilfordii HOM05D006994 ORTHO05D008229 0.0e+00 2245.3 1157 100.0
QL08p043727 Quercus lobata HOM05D006994 ORTHO05D008229 3.9e-144 516.9 1315 31.6
Dinv12707 Davidia involucrata HOM05D006994 ORTHO05D008229 3.0e-136 490.7 1281 31.2
Cfa022555 Carpinus fangiana HOM05D006994 ORTHO05D008229 1.7e-134 485.0 998 34.6
Dinv06483 Davidia involucrata HOM05D006994 ORTHO05D008229 1.4e-133 481.9 1313 31.4
Thecc.01G159900 Theobroma cacao HOM05D006994 ORTHO05D008229 2.4e-133 481.1 1297 31.4
Prupe.3G170300 Prunus persica HOM05D006994 ORTHO05D008229 7.7e-124 449.5 1327 30.6
Ciclev10030533m.g Citrus clementina HOM05D006994 ORTHO05D008229 1.9e-122 444.9 1290 30.0
Duzib187G0002 Durio zibethinus HOM05D006994 ORTHO05D008229 1.0e-120 439.1 1277 30.8
Gorai.006G007500 Gossypium raimondii HOM05D006994 ORTHO05D008229 1.8e-120 438.3 1301 30.4
TAR627G0262 Trochodendron aralioides HOM05D006994 ORTHO05D008229 2.6e-119 434.5 1005 32.6
Gohir.D09G005900 Gossypium hirsutum HOM05D006994 ORTHO05D008229 2.8e-118 431.0 1295 30.6
GSVIVG01000809001 Vitis vinifera HOM05D006994 ORTHO05D008229 1.5e-114 418.7 1205 30.6
Duzib147G0646 Durio zibethinus HOM05D006994 ORTHO05D008229 2.8e-110 404.4 1133 33.2
COL.COLO4_33721 Corchorus olitorius HOM05D006994 ORTHO05D008229 1.4e-109 402.1 1052 31.3
RcHm_v2.0_Chr2g0150941 Rosa chinensis HOM05D006994 ORTHO05D008229 4.3e-106 390.6 1290 29.2
TAR629G2429 Trochodendron aralioides HOM05D006994 ORTHO05D008229 8.0e-105 386.3 1313 28.5
Atru.chr6.1474 Acer truncatum HOM05D006994 ORTHO05D008229 5.8e-103 380.2 975 32.4
Actinidia32524 Actinidia chinensis HOM05D006994 ORTHO05D008229 1.5e-98 365.5 1230 29.6
Gohir.A09G006700 Gossypium hirsutum HOM05D006994 ORTHO05D008229 2.8e-97 361.3 1169 29.8
FAN02G4438 Fragaria x ananassa HOM05D006994 ORTHO05D008229 2.3e-96 358.2 1280 28.6
FAN14G2472 Fragaria x ananassa HOM05D006994 ORTHO05D008229 2.6e-95 354.8 1278 29.0
CSS0008190 Camellia sinensis var. sinensis HOM05D006994 ORTHO05D008229 2.2e-94 351.7 1047 30.4
FvH4_6g37820 Fragaria vesca HOM05D006994 ORTHO05D008229 4.1e-93 347.4 1279 28.9
Cpa.g.sc50.71 Carica papaya HOM05D006994 ORTHO05D008229 3.0e-91 341.3 1034 30.2
MD09G1155600 Malus domestica HOM05D006994 ORTHO05D008229 3.3e-90 337.8 1309 27.1
FAN09G0855 Fragaria x ananassa HOM05D006994 ORTHO05D008229 4.7e-89 334.0 1354 27.8
CiPaw.03G188200 Carya illinoinensis HOM05D006994 ORTHO05D008229 7.5e-87 326.6 883 30.4
vmacro23412 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 3.0e-83 314.7 1239 28.1
Nn3g20985 Nelumbo nucifera HOM05D006994 ORTHO05D008229 1.9e-82 312.0 1316 27.1
Hma1.2p1_0036F.1_g023730 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 5.4e-77 293.9 980 29.2
Rhsim06G0121200 Rhododendron simsii HOM05D006994 ORTHO05D008229 4.4e-71 274.2 1206 26.9
CANSAT64G1952 Cannabis sativa HOM05D006994 ORTHO05D008229 3.8e-70 271.2 1354 27.0
Eucgr.A01960 Eucalyptus grandis HOM05D006994 ORTHO05D008229 1.9e-69 268.9 1072 27.9
Nn6g34417 Nelumbo nucifera HOM05D006994 ORTHO05D008229 3.3e-66 258.1 1311 24.8
Manes.02G085800 Manihot esculenta HOM05D006994 ORTHO05D008229 6.9e-64 250.4 1075 28.4
Actinidia11193 Actinidia chinensis HOM05D006994 ORTHO05D008229 3.4e-63 248.1 1181 26.4
MD17G1141700 Malus domestica HOM05D006994 ORTHO05D008229 1.8e-59 235.7 847 27.6
PGR042G2686 Punica granatum HOM05D006994 ORTHO05D008229 3.3e-58 231.5 1272 27.4
Lj1A585G38 Lonicera japonica HOM05D006994 ORTHO05D008229 5.3e-56 224.2 1227 25.8
Aqoxy4G00195 Aquilegia oxysepala HOM05D006994 ORTHO05D008229 1.7e-54 219.2 1274 24.6
Glyma.08G310800 Glycine max HOM05D006994 ORTHO05D008229 4.6e-52 211.1 997 26.0
TPR.G12670 Trifolium pratense HOM05D006994 ORTHO05D008229 1.3e-49 203.0 972 26.4
Glyma.14G026900 Glycine max HOM05D006994 ORTHO05D008229 5.3e-48 197.6 988 26.3
Sed0021960 Sechium edule HOM05D006994 ORTHO05D008229 9.0e-48 196.8 1238 24.0
CsaV3_6G037970 Cucumis sativus L. HOM05D006994 ORTHO05D008229 2.2e-46 192.2 1245 24.5
MELO3C014460.2 Cucumis melo HOM05D006994 ORTHO05D008229 3.8e-46 191.4 1243 24.4
Ca_06289_v3 Cicer arietinum L. HOM05D006994 ORTHO05D008229 1.9e-45 189.1 969 25.7
Phvul.008G190400 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 4.2e-45 188.0 984 26.2
Cc05_g09220 Coffea canephora HOM05D006994 ORTHO05D008229 1.6e-44 186.0 1247 24.1
Lalb_Chr04g0248671 Lupinus albus HOM05D006994 ORTHO05D008229 2.5e-42 178.7 995 24.7
Glyma.02G288000 Glycine max HOM05D006994 ORTHO05D008229 7.4e-42 177.2 981 24.9
Psat0s1339g0080 Pisum sativum HOM05D006994 ORTHO05D008229 7.4e-42 177.2 947 25.3
arahy.Tifrunner.gnm1.ann1.T2GFFQ Arachis hypogaea HOM05D006994 ORTHO05D008229 3.7e-41 174.9 959 24.6
arahy.Tifrunner.gnm1.ann1.0D28PY Arachis hypogaea HOM05D006994 ORTHO05D008229 6.3e-41 174.1 956 24.8
LjContig00310g0024424 Lotus japonicus HOM05D006994 ORTHO05D008229 8.2e-41 173.7 953 24.7
VMungo0647G0009 Vigna mungo HOM05D006994 ORTHO05D008229 1.1e-40 173.3 982 25.4
Sed0007753 Sechium edule HOM05D006994 ORTHO05D008229 6.5e-38 164.1 1206 25.1
VMungo0540G1807 Vigna mungo HOM05D006994 ORTHO05D008229 1.2e-36 159.8 1010 24.7
ClCG09G022300 Citrullus lanatus HOM05D006994 ORTHO05D008229 6.1e-36 157.5 1283 23.6
Sopen07g029270 Solanum pennellii HOM05D006994 ORTHO05D008229 1.5e-34 152.9 1252 23.6
Medtr5g091810 Medicago truncatula HOM05D006994 ORTHO05D008229 2.2e-33 149.1 1059 23.9
PGSC0003DMG400017294 Solanum tuberosum HOM05D006994 ORTHO05D008229 3.7e-33 148.3 1261 24.0
Lalb_Chr17g0348341 Lupinus albus HOM05D006994 ORTHO05D008229 1.1e-32 146.7 781 24.8
PSO541G2047 Papaver somniferum HOM05D006994 ORTHO05D008229 5.3e-32 144.4 1009 24.3
CAN.G585.58 Capsicum annuum HOM05D006994 ORTHO05D008229 1.2e-31 143.3 1209 23.3
PSO675G3324 Papaver somniferum HOM05D006994 ORTHO05D008229 3.4e-31 141.7 1013 24.2
CAN.G1332.1 Capsicum annuum HOM05D006994 ORTHO05D008229 5.0e-30 137.9 1221 23.8
Nitab4.5_0007153g0010 Nicotiana tabacum HOM05D006994 ORTHO05D008229 1.1e-29 136.7 1236 23.2
Glyma.18G104900 Glycine max HOM05D006994 ORTHO05D008229 1.2e-28 133.3 919 23.5
CAN.G1481.2 Capsicum annuum HOM05D006994 ORTHO05D008229 1.8e-27 129.4 1213 23.2
SalBow7G4498 Salvia bowleyana HOM05D006994 ORTHO05D008229 3.9e-27 128.3 1181 22.2
Nitab4.5_0001121g0180 Nicotiana tabacum HOM05D006994 ORTHO05D008229 4.4e-26 124.8 1197 22.8
Phvul.006G035100 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 1.1e-24 120.2 944 23.0
arahy.Tifrunner.gnm1.ann1.0VWG63 Arachis hypogaea HOM05D006994 ORTHO05D008229 2.0e-23 115.9 609 26.6
DCAR_021306 Daucus carota HOM05D006994 ORTHO05D008229 2.6e-23 115.5 1357 21.0
Oeu041607.1 Olea europaea HOM05D006994 ORTHO05D008229 7.7e-23 114.0 676 25.4
MSTRG.15058 Avicennia marina HOM05D006994 ORTHO05D008229 2.9e-22 112.1 1253 21.2
vmacro12443 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 2.5e-21 109.0 296 31.8
Solyc07g055910.4 Solanum lycopersicum HOM05D006994 ORTHO05D008229 9.4e-21 107.1 1001 22.7
Peaxi162Scf00154g00620 Petunia axillaris HOM05D006994 ORTHO05D008229 2.3e-19 102.4 1173 22.4
FAN05G3500 Fragaria x ananassa HOM05D006994 ORTHO05D008229 3.0e-19 102.1 228 32.5
ATR0602G060 Amborella trichopoda HOM05D006994 ORTHO05D008229 1.1e-18 100.1 665 24.7
arahy.Tifrunner.gnm1.ann1.EW4W42 Arachis hypogaea HOM05D006994 ORTHO05D008229 1.3e-17 96.7 544 24.4
CDE02G3923 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 6.3e-17 94.4 1146 23.6
Psat5g180160 Pisum sativum HOM05D006994 ORTHO05D008229 1.9e-13 82.8 286 28.3
Cpa.g.sc50.70 Carica papaya HOM05D006994 ORTHO05D008229 2.1e-12 79.3 122 38.5
AL5G40540 Arabidopsis lyrata HOM05D014107 ORTHO05D008229 2.3e-11 75.9 156 32.1
Hma1.2p1_0036F.1_g023740 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 3.0e-11 75.5 71 49.3
CDE08G1216 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 5.2e-11 74.7 574 24.2
Thhalv10005808m.g Eutrema salsugineum HOM05D014107 ORTHO05D008229 2.6e-10 72.4 436 22.5
CiPaw.03G188100 Carya illinoinensis HOM05D006994 ORTHO05D008229 4.4e-10 71.6 63 50.8
AT3G58770 Arabidopsis thaliana HOM05D014107 ORTHO05D008229 2.2e-09 69.3 149 32.2
Gohir.A09G006800 Gossypium hirsutum HOM05D006994 ORTHO05D008229 2.8e-09 68.9 94 43.6
Sopen06g004440 Solanum pennellii HOM05D006994 ORTHO05D008229 3.7e-09 68.6 467 24.2
Sp5g04070 Schrenkiella parvula HOM05D014107 ORTHO05D008229 5.9e-07 61.2 113 34.5
BcaC07g40225 Brassica carinata HOM05D014107 ORTHO05D008229 2.9e-06 58.9 51 51.0
VMungo0540G1881 Vigna mungo HOM05D006994 ORTHO05D008229 2.9e-06 58.9 45 60.0
MSTRG.6762 Avicennia marina HOM05D006994 ORTHO05D008229 3.8e-06 58.5 1092 19.9


User provided reference genes

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