Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 1.4e-85 319.7 171 100.0
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 2.3e-56 222.6 177 72.3
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 5.6e-55 218.0 176 71.0
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 4.0e-53 211.8 183 65.6
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 3.2e-50 202.2 173 65.9
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 7.1e-50 201.1 183 61.2
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 2.1e-49 199.5 187 62.6
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 4.6e-49 198.4 183 60.7
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 1.3e-48 196.8 177 63.3
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 1.7e-48 196.4 177 62.7
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 2.3e-48 196.1 174 63.8
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 5.1e-48 194.9 180 63.9
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 3.3e-47 192.2 172 64.5
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 3.3e-47 192.2 173 63.6
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 3.3e-47 192.2 173 63.0
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 4.3e-47 191.8 173 63.0
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 7.3e-47 191.0 177 62.1
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.6e-46 188.7 177 62.1
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 6.2e-46 188.0 184 59.2
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 1.8e-45 186.4 179 63.1
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 8.9e-45 184.1 171 59.6
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 1.2e-44 183.7 178 60.1
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 4.4e-44 181.8 154 64.9
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 5.8e-44 181.4 171 59.1
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 5.8e-44 181.4 180 61.1
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 7.6e-44 181.0 178 57.3
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 9.9e-44 180.6 178 60.1
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 9.9e-44 180.6 178 56.2
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 2.2e-43 179.5 177 60.5
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 3.8e-43 178.7 188 56.9
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 4.9e-43 178.3 178 55.6
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 4.2e-42 175.3 163 62.0
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 7.1e-42 174.5 146 63.7
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 2.1e-41 172.9 177 56.5
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 2.7e-41 172.6 168 60.1
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 3.5e-41 172.2 178 57.9
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 3.5e-41 172.2 189 55.6
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 4.6e-41 171.8 169 58.0
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 4.6e-41 171.8 178 53.9
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 6.0e-41 171.4 189 55.0
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 1.7e-40 169.9 170 57.6
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 3.3e-39 165.6 166 59.0
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 4.3e-39 165.2 164 59.8
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 5.6e-39 164.9 160 63.8
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 9.6e-39 164.1 181 54.1
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 1.3e-38 163.7 182 55.5
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 1.6e-38 163.3 176 55.1
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 3.6e-38 162.2 179 54.2
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 8.1e-38 161.0 160 61.9
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 8.1e-38 161.0 195 53.3
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 8.1e-38 161.0 182 57.7
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 8.1e-38 161.0 182 57.1
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 4.0e-37 158.7 180 55.0
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 6.9e-37 157.9 150 57.3
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 6.9e-37 157.9 188 56.4
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 6.9e-37 157.9 207 51.7
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 9.0e-37 157.5 177 53.7
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 1.5e-36 156.8 165 60.6
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 2.0e-36 156.4 150 60.7
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 2.6e-36 156.0 176 54.5
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 3.4e-36 155.6 173 53.8
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 1.3e-35 153.7 187 56.7
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 1.3e-35 153.7 187 56.7
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 2.2e-35 152.9 160 57.5
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 3.8e-35 152.1 159 55.3
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 8.4e-35 151.0 187 55.1
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 1.9e-34 149.8 151 58.3
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 1.9e-34 149.8 155 54.8
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 2.4e-34 149.4 171 56.7
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 3.2e-34 149.1 153 56.2
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 7.1e-34 147.9 180 51.7
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 1.2e-33 147.1 100 71.0
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 1.6e-33 146.7 212 45.8
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 2.1e-33 146.4 130 63.1
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 3.5e-33 145.6 149 57.7
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 2.3e-32 142.9 125 61.6
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 3.0e-32 142.5 172 49.4
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 2.5e-31 139.4 110 64.5
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 3.6e-30 135.6 164 50.6
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 3.6e-30 135.6 103 68.0
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 1.4e-29 133.7 161 52.2
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 1.5e-28 130.2 230 43.0
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 7.6e-28 127.9 128 57.0
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 1.3e-27 127.1 130 60.0
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 2.9e-27 125.9 164 50.0
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 4.9e-27 125.2 139 52.5
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 3.3e-23 112.5 115 53.0
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 1.3e-22 110.5 115 53.9
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 4.9e-19 98.6 106 58.5
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 1.6e-17 93.6 73 68.5
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 3.9e-16 89.0 58 77.6
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 7.4e-15 84.7 119 42.0
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 7.4e-15 84.7 123 47.2
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 9.3e-10 67.8 59 57.6
Nitab4.5_0003180g0040 Nicotiana tabacum HOM05D007485 ORTHO05D009437 4.6e-09 65.5 141 37.6
ClCG07G001710 Citrullus lanatus HOM05D007485 ORTHO05D009437 1.3e-08 63.9 102 47.1
THA.LOC104804650 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 1.8e-08 63.5 87 49.4
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 3.0e-08 62.8 125 37.6
Mapoly0101s0026 Marchantia polymorpha HOM05D007485 ORTHO05D009437 2.2e-06 56.6 56 51.8
Ca_22684_v3 Cicer arietinum L. HOM05D007485 ORTHO05D009437 4.8e-06 55.5 52 51.9


User provided reference genes

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