Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 1.3e-57 226.1 105 100.0
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 2.0e-39 165.6 104 70.2
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 4.5e-39 164.5 105 69.5
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 4.5e-39 164.5 104 72.1
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 5.9e-39 164.1 106 68.9
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 1.3e-38 162.9 106 68.9
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 2.9e-38 161.8 104 68.3
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 5.0e-38 161.0 104 71.2
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 6.5e-38 160.6 107 70.1
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 6.5e-38 160.6 103 69.9
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 8.5e-38 160.2 104 70.2
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.1e-37 159.8 103 68.0
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 3.2e-37 158.3 105 67.6
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 4.2e-37 157.9 96 70.8
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 4.2e-37 157.9 104 67.3
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 7.2e-37 157.1 105 67.6
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 7.2e-37 157.1 105 67.6
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 9.4e-37 156.8 102 69.6
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 9.4e-37 156.8 104 69.2
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 1.6e-36 156.0 86 77.9
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 1.6e-36 156.0 104 67.3
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 2.7e-36 155.2 95 70.5
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 3.6e-36 154.8 101 70.3
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 4.7e-36 154.5 101 68.3
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 6.1e-36 154.1 106 64.2
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 6.1e-36 154.1 98 69.4
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 7.9e-36 153.7 94 69.1
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 1.4e-35 152.9 105 65.7
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 1.8e-35 152.5 106 65.1
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 6.7e-35 150.6 104 66.3
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 6.7e-35 150.6 94 69.1
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 8.8e-35 150.2 102 66.7
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 8.8e-35 150.2 106 64.2
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 1.1e-34 149.8 102 66.7
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.5e-34 149.4 105 62.9
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 2.0e-34 149.1 106 64.2
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.3e-34 148.3 104 64.4
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 3.3e-34 148.3 104 64.4
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 5.7e-34 147.5 106 60.4
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 5.7e-34 147.5 103 64.1
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 9.7e-34 146.7 102 64.7
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 1.3e-33 146.4 106 64.2
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 2.2e-33 145.6 105 62.9
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.2e-33 145.6 102 63.7
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 2.8e-33 145.2 96 65.6
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 2.8e-33 145.2 102 63.7
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 3.7e-33 144.8 106 63.2
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 4.8e-33 144.4 107 62.6
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 4.8e-33 144.4 106 64.2
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.8e-33 144.4 104 63.5
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 4.8e-33 144.4 104 62.5
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 4.8e-33 144.4 126 55.6
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 6.3e-33 144.1 107 62.6
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 1.4e-32 142.9 93 66.7
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 1.8e-32 142.5 95 66.3
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.4e-32 142.1 104 62.5
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 4.1e-32 141.4 98 61.2
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 4.1e-32 141.4 102 63.7
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 5.3e-32 141.0 107 61.7
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 7.0e-32 140.6 104 61.5
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 2.0e-31 139.0 90 70.0
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 4.5e-31 137.9 107 60.7
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.3e-30 136.3 115 57.4
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.9e-30 135.2 102 60.8
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-29 133.3 104 59.6
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.5e-29 132.9 108 57.4
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.9e-29 132.5 109 58.7
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 3.2e-29 131.7 103 58.3
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 3.2e-29 131.7 100 57.0
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 4.2e-29 131.3 100 57.0
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 7.2e-29 130.6 78 73.1
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 1.6e-28 129.4 77 71.4
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 2.1e-28 129.0 108 56.5
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.1e-28 129.0 102 54.9
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.1e-28 129.0 102 54.9
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 8.0e-28 127.1 105 56.2
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.0e-27 126.7 75 70.7
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.4e-27 126.3 75 74.7
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 1.4e-27 126.3 108 54.6
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 1.8e-27 125.9 105 54.3
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 2.3e-27 125.6 105 56.2
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 2.3e-27 125.6 79 65.8
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 3.0e-27 125.2 99 58.6
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 5.2e-27 124.4 105 55.2
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 5.2e-27 124.4 105 55.2
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 5.2e-27 124.4 75 69.3
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 6.7e-27 124.0 105 55.2
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 6.7e-27 124.0 105 53.3
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 8.8e-27 123.6 97 56.7
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 2.0e-26 122.5 141 46.8
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 2.6e-26 122.1 75 69.3
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.7e-26 120.9 84 64.3
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 7.5e-26 120.6 78 71.8
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 7.5e-26 120.6 100 52.0
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 9.7e-26 120.2 105 52.4
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 9.7e-26 120.2 78 67.9
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 1.3e-25 119.8 102 52.0
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.3e-25 119.8 78 67.9
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.3e-25 119.8 84 60.7
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 1.7e-25 119.4 116 47.4
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 6.3e-25 117.5 78 65.4
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.1e-24 116.7 78 66.7
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 2.4e-24 115.5 92 53.3
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 4.1e-24 114.8 124 46.8
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 7.0e-24 114.0 70 70.0
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 9.1e-24 113.6 122 46.7
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 9.1e-24 113.6 122 46.7
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 2.0e-23 112.5 116 46.6
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 2.7e-23 112.1 122 45.1
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 7.7e-23 110.5 127 44.9
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 1.7e-22 109.4 73 68.5
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 2.2e-22 109.0 82 53.7
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.5e-21 105.5 74 68.9
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 4.2e-21 104.8 73 58.9
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 5.5e-21 104.4 83 51.8
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 2.7e-20 102.1 77 57.1
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 2.3e-19 99.0 64 67.2
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.6e-18 95.5 66 65.2
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 2.8e-17 92.0 64 59.4
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 3.8e-14 81.6 64 59.4
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 3.2e-13 78.6 88 39.8
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 5.5e-13 77.8 50 66.0
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 7.2e-13 77.4 122 36.1
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 1.6e-12 76.3 53 64.2
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 3.6e-12 75.1 40 80.0
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 6.8e-11 70.9 40 75.0
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 1.3e-09 66.6 85 35.3
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 2.2e-09 65.9 52 61.5
RcHm_v2.0_Chr4g0411551 Rosa chinensis HOM05D000001 ORTHO05D000003 7.7e-07 57.4 61 47.5


User provided reference genes

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