Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 6.1e-67 257.3 126 100.0
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 2.3e-53 212.2 129 82.9
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 2.9e-53 211.8 127 81.1
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 2.9e-53 211.8 129 81.4
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 9.5e-52 206.8 129 81.4
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 4.7e-51 204.5 126 78.6
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 1.4e-50 203.0 128 77.3
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 1.3e-48 196.4 128 76.6
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 4.9e-48 194.5 128 75.8
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.9e-48 194.5 128 75.0
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 6.4e-48 194.1 128 75.8
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 1.1e-47 193.4 129 76.7
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 1.1e-47 193.4 124 77.4
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.9e-47 192.6 127 74.8
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 2.4e-47 192.2 124 78.2
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 2.4e-47 192.2 124 77.4
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.4e-47 192.2 128 74.2
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 2.4e-47 192.2 124 77.4
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 2.4e-47 192.2 124 78.2
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 3.2e-47 191.8 128 74.2
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 3.2e-47 191.8 129 75.2
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 4.1e-47 191.4 124 76.6
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 5.4e-47 191.0 124 76.6
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 5.4e-47 191.0 124 76.6
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 7.0e-47 190.7 124 75.8
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 9.2e-47 190.3 125 74.4
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 1.2e-46 189.9 124 76.6
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 1.2e-46 189.9 125 78.4
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-46 189.9 125 78.4
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-46 189.9 125 78.4
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-46 189.9 125 78.4
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-46 189.9 125 78.4
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.2e-46 189.9 124 76.6
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 1.6e-46 189.5 125 75.2
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.6e-46 189.5 124 76.6
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 1.6e-46 189.5 124 75.8
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 2.7e-46 188.7 124 76.6
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.7e-46 188.7 125 75.2
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 2.7e-46 188.7 125 75.2
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 2.7e-46 188.7 128 74.2
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.7e-46 188.7 124 75.8
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 3.5e-46 188.3 125 72.8
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.5e-46 188.3 125 75.2
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 3.5e-46 188.3 122 75.4
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 3.5e-46 188.3 125 77.6
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 3.5e-46 188.3 124 76.6
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.6e-46 188.0 124 75.8
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 4.6e-46 188.0 125 74.4
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 6.0e-46 187.6 128 73.4
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 6.0e-46 187.6 124 74.2
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 6.0e-46 187.6 125 73.6
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 6.0e-46 187.6 124 75.0
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 6.0e-46 187.6 125 73.6
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 7.8e-46 187.2 129 72.1
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 7.8e-46 187.2 127 72.4
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 1.0e-45 186.8 125 73.6
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 1.0e-45 186.8 125 74.4
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 1.0e-45 186.8 127 73.2
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 1.7e-45 186.0 125 76.0
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.7e-45 186.0 124 75.0
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 2.3e-45 185.7 125 73.6
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 2.3e-45 185.7 124 73.4
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 2.3e-45 185.7 124 73.4
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 2.3e-45 185.7 125 76.0
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.3e-45 185.7 124 73.4
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 3.0e-45 185.3 124 74.2
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 3.0e-45 185.3 124 74.2
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 3.0e-45 185.3 125 72.8
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.0e-45 185.3 124 75.8
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 3.0e-45 185.3 123 74.0
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 3.0e-45 185.3 128 72.7
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 3.9e-45 184.9 125 76.0
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 3.9e-45 184.9 125 76.0
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 3.9e-45 184.9 125 72.0
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 5.0e-45 184.5 124 72.6
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 6.6e-45 184.1 124 75.0
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 6.6e-45 184.1 124 72.6
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 6.6e-45 184.1 122 73.8
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 6.6e-45 184.1 124 72.6
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 8.6e-45 183.7 125 72.8
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 8.6e-45 183.7 125 72.8
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 8.6e-45 183.7 124 72.6
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 1.1e-44 183.3 124 72.6
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 1.1e-44 183.3 124 72.6
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 1.1e-44 183.3 125 72.0
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 1.5e-44 183.0 125 72.0
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.5e-44 183.0 124 71.8
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 1.5e-44 183.0 112 82.1
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 1.9e-44 182.6 124 71.8
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 1.9e-44 182.6 124 71.8
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 2.5e-44 182.2 124 75.0
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 2.5e-44 182.2 125 75.2
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 2.5e-44 182.2 124 71.8
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 3.3e-44 181.8 125 72.0
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 3.3e-44 181.8 125 72.0
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 3.3e-44 181.8 125 72.0
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 3.3e-44 181.8 125 72.0
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 3.3e-44 181.8 125 72.0
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 3.3e-44 181.8 125 72.0
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 3.3e-44 181.8 125 73.6
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 3.3e-44 181.8 125 72.0
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 3.3e-44 181.8 125 74.4
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 3.3e-44 181.8 124 71.8
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 4.3e-44 181.4 124 72.6
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 4.3e-44 181.4 123 73.2
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 5.6e-44 181.0 124 72.6
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 5.6e-44 181.0 124 71.8
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 5.6e-44 181.0 124 72.6
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 7.3e-44 180.6 124 70.2
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 9.5e-44 180.3 112 80.4
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 9.5e-44 180.3 126 67.5
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 1.6e-43 179.5 125 71.2
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.6e-43 179.5 124 71.0
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.6e-43 179.5 120 72.5
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 2.8e-43 178.7 121 72.7
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 6.2e-43 177.6 111 79.3
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 6.2e-43 177.6 125 68.8
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 8.1e-43 177.2 125 68.0
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 1.4e-42 176.4 124 68.5
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 1.4e-42 176.4 123 72.4
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 2.0e-41 172.6 124 68.5
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 5.8e-41 171.0 134 65.7
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 5.8e-41 171.0 128 67.2
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 5.8e-41 171.0 129 62.8
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 9.8e-41 170.2 125 66.4
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 1.3e-40 169.9 124 66.1
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 2.2e-40 169.1 112 75.9
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 2.9e-40 168.7 127 67.7
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.1e-39 166.8 116 69.8
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 1.6e-38 162.9 112 72.3
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 3.5e-38 161.8 124 66.9
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 1.0e-37 160.2 108 75.0
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.0e-37 160.2 127 65.4
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 1.1e-36 156.8 136 60.3
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 1.5e-36 156.4 116 70.7
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.5e-36 156.4 104 76.0
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 5.6e-36 154.5 117 62.4
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 9.5e-36 153.7 107 72.0
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 1.1e-34 150.2 120 57.5
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.8e-34 149.4 123 56.1
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 2.3e-34 149.1 102 75.5
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.4e-33 145.2 110 69.1
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.3e-32 143.3 85 76.5
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 2.2e-32 142.5 100 70.0
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 5.4e-31 137.9 82 74.4
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.6e-30 134.8 101 71.3
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 7.8e-30 134.0 117 51.3
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 7.8e-30 134.0 122 54.9
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 1.7e-29 132.9 95 71.6
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.3e-29 132.5 101 70.3
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.2e-27 126.7 97 67.0
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.8e-26 122.9 122 52.5
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 1.3e-21 106.7 119 46.2
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.1e-20 103.6 57 78.9
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 1.5e-20 103.2 102 49.0
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 3.3e-20 102.1 78 59.0
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 2.8e-19 99.0 123 42.3
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 8.1e-19 97.4 107 49.5
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.8e-18 96.3 105 51.4
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 1.3e-13 80.1 63 69.8
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 5.6e-12 74.7 43 76.7
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 1.4e-07 60.1 35 77.1
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.1e-06 56.2 32 75.0
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 3.5e-06 55.5 35 71.4


User provided reference genes

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