Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G2110 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 3.7e-155 551.6 298 100.0
TWI74G1242 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 2.5e-143 512.3 297 92.9
Duzib151G1210 Durio zibethinus HOM05D005754 ORTHO05D006843 1.1e-133 480.3 297 85.9
COL.COLO4_15977 Corchorus olitorius HOM05D005754 ORTHO05D006843 1.7e-131 473.0 297 85.2
Thecc.04G266000 Theobroma cacao HOM05D005754 ORTHO05D006843 5.4e-130 468.0 297 83.8
Cfa001129 Carpinus fangiana HOM05D005754 ORTHO05D006843 1.6e-129 466.5 295 85.4
Haze_05263 Corylus avellana HOM05D005754 ORTHO05D006843 4.6e-129 464.9 294 85.0
CiPaw.09G178700 Carya illinoinensis HOM05D005754 ORTHO05D006843 2.5e-127 459.1 297 81.8
CiPaw.09G178800 Carya illinoinensis HOM05D005754 ORTHO05D006843 7.3e-127 457.6 297 81.8
Glyma.12G019600 Glycine max HOM05D005754 ORTHO05D006843 4.0e-125 451.8 297 82.8
Cpa.g.sc17.6 Carica papaya HOM05D005754 ORTHO05D006843 6.8e-125 451.1 297 81.8
Ciclev10016094m.g Citrus clementina HOM05D005754 ORTHO05D006843 6.8e-125 451.1 296 81.4
QL03p068630 Quercus lobata HOM05D005754 ORTHO05D006843 8.9e-125 450.7 294 82.0
QL05p030092 Quercus lobata HOM05D005754 ORTHO05D006843 8.9e-125 450.7 294 82.0
TPR.G24478 Trifolium pratense HOM05D005754 ORTHO05D006843 1.2e-124 450.3 297 82.2
Manes.16G050000 Manihot esculenta HOM05D005754 ORTHO05D006843 4.4e-124 448.4 296 81.4
Gorai.006G250700 Gossypium raimondii HOM05D005754 ORTHO05D006843 9.9e-124 447.2 297 80.5
Gohir.D09G228000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 1.3e-123 446.8 297 80.5
Atru.chr10.361 Acer truncatum HOM05D005754 ORTHO05D006843 6.4e-123 444.5 290 82.8
Potri.001G160600 Populus trichocarpa HOM05D005754 ORTHO05D006843 8.4e-123 444.1 298 78.9
Gohir.A09G227000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 1.1e-122 443.7 297 80.1
Prupe.7G012900 Prunus persica HOM05D005754 ORTHO05D006843 1.4e-122 443.4 296 81.4
Potri.003G074300 Populus trichocarpa HOM05D005754 ORTHO05D006843 2.4e-122 442.6 298 79.2
Ca_04011_v3 Cicer arietinum L. HOM05D005754 ORTHO05D006843 3.2e-122 442.2 297 80.5
TPR.G21775 Trifolium pratense HOM05D005754 ORTHO05D006843 4.1e-122 441.8 297 81.1
Sabra03G0045000 Salix brachista HOM05D005754 ORTHO05D006843 5.4e-122 441.4 298 79.5
PGR142G3917 Punica granatum HOM05D005754 ORTHO05D006843 9.2e-122 440.7 297 79.1
VMungo1127G0046 Vigna mungo HOM05D005754 ORTHO05D006843 1.2e-121 440.3 297 80.8
Lalb_Chr17g0344101 Lupinus albus HOM05D005754 ORTHO05D006843 2.1e-121 439.5 297 80.1
MD05G1011700 Malus domestica HOM05D005754 ORTHO05D006843 1.3e-120 436.8 295 81.0
Sed0006244 Sechium edule HOM05D005754 ORTHO05D006843 1.7e-120 436.4 296 79.4
Medtr3g077990 Medicago truncatula HOM05D005754 ORTHO05D006843 5.1e-120 434.9 297 79.8
CARHR129140 Cardamine hirsuta HOM05D005754 ORTHO05D006843 6.6e-120 434.5 298 79.5
THA.LOC104798565 Tarenaya hassleriana HOM05D005754 ORTHO05D006843 1.9e-119 433.0 298 78.9
PSO801G0209 Papaver somniferum HOM05D005754 ORTHO05D006843 2.5e-119 432.6 295 78.0
Aqoxy2G00957 Aquilegia oxysepala HOM05D005754 ORTHO05D006843 4.3e-119 431.8 298 77.9
ClCG01G009960 Citrullus lanatus HOM05D005754 ORTHO05D006843 5.6e-119 431.4 297 78.1
Aa31LG9G16220 Aethionema arabicum HOM05D005754 ORTHO05D006843 9.6e-119 430.6 298 78.9
TAR636G0743 Trochodendron aralioides HOM05D005754 ORTHO05D006843 4.7e-118 428.3 295 78.0
TAR636G1551 Trochodendron aralioides HOM05D005754 ORTHO05D006843 4.7e-118 428.3 295 78.0
arahy.Tifrunner.gnm1.ann1.RJAX1V Arachis hypogaea HOM05D005754 ORTHO05D006843 8.1e-118 427.6 298 78.5
MELO3C021702.2 Cucumis melo HOM05D005754 ORTHO05D006843 8.1e-118 427.6 293 77.8
Nn2g13637 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.1e-117 427.2 293 78.5
Nn2g13638 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.1e-117 427.2 293 78.5
RcHm_v2.0_Chr3g0496061 Rosa chinensis HOM05D005754 ORTHO05D006843 1.1e-117 427.2 296 77.0
MD12G1011000 Malus domestica HOM05D005754 ORTHO05D006843 3.1e-117 425.6 296 78.4
AT2G34980 Arabidopsis thaliana HOM05D005754 ORTHO05D006843 8.9e-117 424.1 298 77.2
FvH4_2g14913 Fragaria vesca HOM05D005754 ORTHO05D006843 8.9e-117 424.1 293 79.5
PSO339G5576 Papaver somniferum HOM05D005754 ORTHO05D006843 1.5e-116 423.3 294 76.9
arahy.Tifrunner.gnm1.ann1.9I9HCV Arachis hypogaea HOM05D005754 ORTHO05D006843 4.4e-116 421.8 298 77.9
Prupe.8G016600 Prunus persica HOM05D005754 ORTHO05D006843 2.2e-115 419.5 295 78.3
Thhalv10016993m.g Eutrema salsugineum HOM05D005754 ORTHO05D006843 3.8e-115 418.7 293 78.2
Lj3g0027197 Lotus japonicus HOM05D005754 ORTHO05D006843 4.9e-115 418.3 297 77.1
TAR633G0926 Trochodendron aralioides HOM05D005754 ORTHO05D006843 1.4e-114 416.8 290 79.3
RcHm_v2.0_Chr6g0277521 Rosa chinensis HOM05D005754 ORTHO05D006843 5.4e-114 414.8 296 77.0
vmacro03555 Vaccinium macrocarpon HOM05D005754 ORTHO05D006843 7.1e-114 414.5 296 75.3
CSS0030019 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 9.3e-114 414.1 295 75.6
FAN28G1898 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.6e-113 413.3 304 74.3
BraA05t20016Z Brassica rapa HOM05D005754 ORTHO05D006843 4.6e-113 411.8 293 77.1
Cc09_g05360 Coffea canephora HOM05D005754 ORTHO05D006843 1.3e-112 410.2 296 73.3
C04p13810 Brassica napus HOM05D005754 ORTHO05D006843 1.7e-112 409.8 293 77.1
BolC4t22971H Brassica oleracea HOM05D005754 ORTHO05D006843 1.7e-112 409.8 293 77.1
BcaB02g09492 Brassica carinata HOM05D005754 ORTHO05D006843 2.3e-112 409.5 292 77.1
Nitab4.5_0006933g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 5.1e-112 408.3 296 73.0
Nitab4.5_0006976g0040 Nicotiana tabacum HOM05D005754 ORTHO05D006843 8.7e-112 407.5 296 72.6
Sopen02g026230 Solanum pennellii HOM05D005754 ORTHO05D006843 1.5e-111 406.8 296 72.6
PGSC0003DMG400017743 Solanum tuberosum HOM05D005754 ORTHO05D006843 1.5e-111 406.8 296 72.6
FAN24G3472 Fragaria x ananassa HOM05D005754 ORTHO05D006843 2.5e-111 406.0 293 76.5
CAN.G809.72 Capsicum annuum HOM05D005754 ORTHO05D006843 3.3e-111 405.6 296 72.6
DCAR_002228 Daucus carota HOM05D005754 ORTHO05D006843 5.6e-111 404.8 293 73.7
FvH4_1g22930 Fragaria vesca HOM05D005754 ORTHO05D006843 5.6e-111 404.8 293 76.5
Solyc02g081610.3 Solanum lycopersicum HOM05D005754 ORTHO05D006843 5.6e-111 404.8 296 72.3
BcaB02g09491 Brassica carinata HOM05D005754 ORTHO05D006843 7.3e-111 404.4 299 74.6
A05p10720 Brassica napus HOM05D005754 ORTHO05D006843 7.3e-111 404.4 301 74.8
Rhsim08G0028000 Rhododendron simsii HOM05D005754 ORTHO05D006843 1.6e-110 403.3 296 73.3
SalBow5G0150 Salvia bowleyana HOM05D005754 ORTHO05D006843 3.6e-110 402.1 296 72.3
AL4G30990 Arabidopsis lyrata HOM05D005754 ORTHO05D006843 8.1e-110 401.0 298 74.8
PGSC0003DMG400024410 Solanum tuberosum HOM05D005754 ORTHO05D006843 8.1e-110 401.0 296 72.0
Carub.0004s1667 Capsella rubella HOM05D005754 ORTHO05D006843 1.1e-109 400.6 298 74.2
Oeu063995.1 Olea europaea HOM05D005754 ORTHO05D006843 2.4e-109 399.4 296 74.0
MSTRG.26599 Avicennia marina HOM05D005754 ORTHO05D006843 3.1e-109 399.1 297 71.4
Rhsim02G0117500 Rhododendron simsii HOM05D005754 ORTHO05D006843 3.1e-109 399.1 296 72.6
ATR0618G331 Amborella trichopoda HOM05D005754 ORTHO05D006843 5.3e-109 398.3 298 72.1
Zm00001eb185080 Zea mays HOM05D005754 ORTHO05D006843 1.5e-108 396.7 292 74.0
BcaC02g07743 Brassica carinata HOM05D004145 ORTHO05D006843 3.4e-108 395.6 297 74.1
Os02g0622200 Oryza sativa ssp. japonica HOM05D005754 ORTHO05D006843 3.4e-108 395.6 296 70.9
Dinv31187 Davidia involucrata HOM05D005754 ORTHO05D006843 2.9e-107 392.5 297 73.1
HanXRQChr04g0115041 Helianthus annuus HOM05D005754 ORTHO05D006843 2.9e-107 392.5 281 75.4
Sc15g0000060 Simmondsia chinensis HOM05D005754 ORTHO05D006843 1.4e-106 390.2 300 70.0
Migut.H00867 Erythranthe guttata HOM05D005754 ORTHO05D006843 9.3e-106 387.5 291 72.5
FAN19G0110 Fragaria x ananassa HOM05D005754 ORTHO05D006843 4.3e-103 378.6 281 75.8
Lsat_1_v5_gn_5_184141 Lactuca sativa HOM05D005754 ORTHO05D006843 9.6e-103 377.5 290 71.7
Lj2P343T23 Lonicera japonica HOM05D005754 ORTHO05D006843 1.3e-102 377.1 281 73.7
EL10Ac9g21106 Beta vulgaris HOM05D005754 ORTHO05D006843 1.4e-101 373.6 297 67.7
Eucgr.G02638 Eucalyptus grandis HOM05D005754 ORTHO05D006843 3.1e-101 372.5 297 68.7
SHI51133 Sapria himalayana HOM05D005754 ORTHO05D006843 5.3e-101 371.7 297 67.0
SGA_v2.0_scaffold184G40027 Striga asiatica HOM05D005754 ORTHO05D006843 9.0e-101 370.9 296 69.3
unitig_747.g21312 Utricularia gibba HOM05D005754 ORTHO05D006843 2.9e-99 365.9 296 65.5
Ah.01g016960 Amaranthus hybridus HOM05D005754 ORTHO05D006843 4.9e-99 365.2 296 67.2
SEGI_24883 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 2.4e-98 362.8 302 63.9
FAN26G0490 Fragaria x ananassa HOM05D005754 ORTHO05D006843 4.2e-98 362.1 281 73.3
AUR62038334 Chenopodium quinoa HOM05D005754 ORTHO05D006843 1.3e-96 357.1 297 65.7
Lsat_1_v5_gn_2_60361 Lactuca sativa HOM05D005754 ORTHO05D006843 3.4e-92 342.4 273 70.0
HPP92_025694 Vanilla planifolia HOM05D005754 ORTHO05D006843 4.5e-92 342.0 292 63.7
AUR62023912 Chenopodium quinoa HOM05D005754 ORTHO05D006843 1.2e-89 334.0 281 65.5
SHI47983 Sapria himalayana HOM05D005754 ORTHO05D006843 9.6e-87 324.3 277 65.7
Psat4g130160 Pisum sativum HOM05D005754 ORTHO05D006843 1.9e-82 310.1 229 76.0
Phvul.011G021750 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 2.6e-76 289.7 195 81.5
Pp3c1_31960 Physcomitrium patens HOM05D005754 ORTHO05D006843 2.5e-74 283.1 306 55.2
QL06p000087 Quercus lobata HOM05D005754 ORTHO05D006843 3.2e-74 282.7 286 58.7
FAN27G3249 Fragaria x ananassa HOM05D005754 ORTHO05D006843 5.3e-69 265.4 195 75.9
Atru.chr10.357 Acer truncatum HOM05D005754 ORTHO05D006843 1.0e-64 251.1 162 82.1
GSVIVG01012143001 Vitis vinifera HOM05D005754 ORTHO05D006843 9.1e-61 238.0 159 81.1
SMO174G0201 Selaginella moellendorffii HOM05D005754 ORTHO05D006843 2.0e-60 236.9 292 50.3
AagrBONN_evm.TU.Sc2ySwM_368.2727 Anthoceros agrestis HOM05D005754 ORTHO05D006843 1.0e-59 234.6 298 48.0
SEGI_06024 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 6.1e-57 225.3 194 62.4
AUR62040653 Chenopodium quinoa HOM05D002008 ORTHO05D006843 1.1e-55 221.1 195 63.6
ClCG01G008540 Citrullus lanatus HOM05D005754 ORTHO05D006843 3.7e-54 216.1 292 47.6
Phvul.011G022000 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 3.5e-52 209.5 139 79.9
Mapoly0096s0067 Marchantia polymorpha HOM05D005754 ORTHO05D006843 5.0e-51 205.7 336 42.0
Psat4g130000 Pisum sativum HOM05D005754 ORTHO05D006843 5.7e-47 192.2 237 54.0
ECA238G2846 Erigeron canadensis HOM05D005754 ORTHO05D006843 1.1e-45 188.0 134 73.9
Peaxi162Scf00048g00146 Petunia axillaris HOM05D005754 ORTHO05D006843 2.6e-39 166.8 204 49.0
TPR.G29739 Trifolium pratense HOM05D005754 ORTHO05D006843 3.1e-37 159.8 115 77.4
Psat7g123440 Pisum sativum HOM05D005754 ORTHO05D006843 7.0e-37 158.7 186 54.3
Sp2g07050 Schrenkiella parvula HOM05D005754 ORTHO05D006843 1.1e-34 151.4 104 76.9
Nitab4.5_0011913g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 3.0e-32 143.3 91 79.1
CSS0033773 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 3.4e-31 139.8 289 37.7
CBR_g21245 Chara braunii HOM05D005754 ORTHO05D006843 3.4e-31 139.8 170 47.1
FAN15G0194 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.5e-26 124.4 97 73.2
CARHR278340 Cardamine hirsuta HOM05D005754 ORTHO05D006843 2.7e-20 103.6 86 64.0
Cre02.g109850 Chlamydomonas reinhardtii HOM05D005754 ORTHO05D006843 1.2e-17 94.7 290 30.7
MCO15G034 Micromonas commoda HOM05D005754 ORTHO05D006843 5.2e-16 89.4 313 28.1
CsaV3_1G018460 Cucumis sativus L. HOM05D001859 ORTHO05D001836 1.2e-15 88.2 54 77.8
BcaC02g11579 Brassica carinata HOM05D005754 ORTHO05D006843 2.0e-15 87.4 60 73.3
Cfa024382 Carpinus fangiana HOM05D005754 ORTHO05D006843 1.3e-14 84.7 176 36.4
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 1.3e-14 84.7 139 45.3
Hund00745 Selenicereus undatus HOM05D005754 ORTHO05D006843 2.9e-14 83.6 46 82.6
Psat4g159400 Pisum sativum HOM05D003463 ORTHO05D004846 3.5e-12 76.6 150 38.0
BcaB06g28814 Brassica carinata HOM05D005754 ORTHO05D006843 5.8e-07 59.3 57 63.2


User provided reference genes

Program Settings